Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_H15
         (557 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DIG0 Cluster: Chromosome undetermined scaffold_51, wh...    36   0.85 
UniRef50_Q7QYD4 Cluster: GLP_162_59917_50375; n=1; Giardia lambl...    35   1.1  
UniRef50_Q4XXZ5 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_A6LJB8 Cluster: Abortive infection protein; n=1; Thermo...    32   7.9  

>UniRef50_A0DIG0 Cluster: Chromosome undetermined scaffold_51, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_51, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 2693

 Score = 35.5 bits (78), Expect = 0.85
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 412  FNFIDPTIVLFFVFCSQSFLVWYDDCRKKNSDCHKN 305
            F  +DP I   FV C  +F + +++C++ NS C  N
Sbjct: 2315 FQSVDPEICKIFVACVDAFYLTHEECQRANSGCTTN 2350


>UniRef50_Q7QYD4 Cluster: GLP_162_59917_50375; n=1; Giardia lamblia
            ATCC 50803|Rep: GLP_162_59917_50375 - Giardia lamblia
            ATCC 50803
          Length = 3180

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -2

Query: 463  VVMCLIVVLEFYANENVFNFIDPTIVLFFV-FCSQSFLVWYDDCRKKNSDC 314
            V+  L  + EF+A ENV  +I PT +  F+ F  +SFL  Y+DC     +C
Sbjct: 1523 VLYVLYTLAEFFAIENVDLYIKPTDLRKFISFHYKSFLKLYNDCEVDLIEC 1573


>UniRef50_Q4XXZ5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 236

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
 Frame = -2

Query: 361 SFLVWYDDCRKKNSDCHKNFYSPLNDLIFEK---YFLF*LTMRKNEKSK 224
           SF + YD C++  S C KN ++ LN L+ EK    F F L+++ NE+ K
Sbjct: 26  SFDLLYD-CKEGYSFCKKNNFNNLNGLLIEKNIFLFNFILSIKYNEEKK 73


>UniRef50_A6LJB8 Cluster: Abortive infection protein; n=1;
           Thermosipho melanesiensis BI429|Rep: Abortive infection
           protein - Thermosipho melanesiensis BI429
          Length = 509

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = -2

Query: 448 IVVLEFYANENVFNFIDPTIVLFF--VFCSQSFLVWYDDCRKK 326
           + VLE YA  N   F D  IVLFF  +F S +  ++++D ++K
Sbjct: 21  VPVLESYAEVNYGTFFDGVIVLFFCVIFISVTTRLFFEDFKEK 63


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,239,349
Number of Sequences: 1657284
Number of extensions: 7062699
Number of successful extensions: 15715
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15707
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)