Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_H15
         (557 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0455 + 10445417-10446931,10447370-10447903,10448198-104482...    29   1.9  

>02_02_0455 +
           10445417-10446931,10447370-10447903,10448198-10448278,
           10448699-10448770,10449643-10449669
          Length = 742

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -2

Query: 352 VWYDDCRKKNSDCHKNFYSPLNDLIFEKYFLF*LTMRKNEKSKIIIFLYSFT 197
           VW DD  K+N  C K F SPL ++      L  +T R ++ S  +  L  FT
Sbjct: 311 VW-DDALKENGQCWKKFCSPLANVCQGSMML--ITTRSSKVSNALGTLEPFT 359


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,063,627
Number of Sequences: 37544
Number of extensions: 164801
Number of successful extensions: 278
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)