Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_H13
         (631 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064957-1|AAH64957.1|  226|Homo sapiens SPCS2 protein protein.       153   7e-37
BC106066-1|AAI06067.1|  226|Homo sapiens SPCS2 protein protein.       151   2e-36
D14658-1|BAA03492.1|  123|Homo sapiens KIAA0102 protein.              101   2e-21
CR542243-1|CAG47039.1|  123|Homo sapiens KIAA0102 protein.            101   2e-21
CR542233-1|CAG47029.1|  123|Homo sapiens KIAA0102 protein.            101   2e-21
BC082231-1|AAH82231.2|  123|Homo sapiens signal peptidase comple...   101   2e-21
BC070276-1|AAH70276.2|  123|Homo sapiens signal peptidase comple...   101   2e-21
BC008063-1|AAH08063.3|  123|Homo sapiens signal peptidase comple...   101   2e-21

>BC064957-1|AAH64957.1|  226|Homo sapiens SPCS2 protein protein.
          Length = 226

 Score =  153 bits (370), Expect = 7e-37
 Identities = 76/174 (43%), Positives = 112/174 (64%), Gaps = 4/174 (2%)
 Frame = -2

Query: 573 KINKWDGAAAKNAVDDAIREVMTGDLKCKESFALIDGRLFXXXXXXXXXXXXXLWDYLYP 394
           KI+KWDG+A KN++DD++++V+    K  E+F LIDGRL              +WDY++P
Sbjct: 47  KIDKWDGSAVKNSLDDSVKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHP 106

Query: 393 FPQSRLVLIICVSSYFILMGILTLYXTFKEKGIFVVA--KEKVG-NNTRVWEASSYVKKH 223
           FP+S+ VL +CV SYF++MGILT+Y ++KEK IF+VA  K+  G +   +W+ SS +K+ 
Sbjct: 107 FPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRF 166

Query: 222 DDKYNLVIV-MRDTNGNTREASVTKSFANFIDVNGTVVQNIVXNEITKLYHSRA 64
           DDKY L +  +       REA  TKS A F D +GT+V +    EI++L+ S A
Sbjct: 167 DDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLA 220


>BC106066-1|AAI06067.1|  226|Homo sapiens SPCS2 protein protein.
          Length = 226

 Score =  151 bits (366), Expect = 2e-36
 Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
 Frame = -2

Query: 573 KINKWDGAAAKNAVDDAIREVMTGDLKCKESFALIDGRLFXXXXXXXXXXXXXLWDYLYP 394
           KI+KWDG+A KN++DD+ ++V+    K  E+F LIDGRL              +WDY++P
Sbjct: 47  KIDKWDGSAVKNSLDDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHP 106

Query: 393 FPQSRLVLIICVSSYFILMGILTLYXTFKEKGIFVVA--KEKVG-NNTRVWEASSYVKKH 223
           FP+S+ VL +CV SYF++MGILT+Y ++KEK IF+VA  K+  G +   +W+ SS +K+ 
Sbjct: 107 FPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRF 166

Query: 222 DDKYNLVIV-MRDTNGNTREASVTKSFANFIDVNGTVVQNIVXNEITKLYHSRA 64
           DDKY L +  +       REA  TKS A F D +GT+V +    EI++L+ S A
Sbjct: 167 DDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLA 220


>D14658-1|BAA03492.1|  123|Homo sapiens KIAA0102 protein.
          Length = 123

 Score =  101 bits (242), Expect = 2e-21
 Identities = 52/117 (44%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
 Frame = -2

Query: 402 LYPFPQSRLVLIICVSSYFILMGILTLYXTFKEKGIFVVA--KEKVG-NNTRVWEASSYV 232
           ++PFP+S+ VL +CV SYF++MGILT+Y ++KEK IF+VA  K+  G +   +W+ SS +
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSL 60

Query: 231 KKHDDKYNLVIV-MRDTNGNTREASVTKSFANFIDVNGTVVQNIVXNEITKLYHSRA 64
           K+ DDKY L +  +       REA  TKS A F D +GT+V +    EI++L+ S A
Sbjct: 61  KRFDDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLA 117


>CR542243-1|CAG47039.1|  123|Homo sapiens KIAA0102 protein.
          Length = 123

 Score =  101 bits (242), Expect = 2e-21
 Identities = 52/117 (44%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
 Frame = -2

Query: 402 LYPFPQSRLVLIICVSSYFILMGILTLYXTFKEKGIFVVA--KEKVG-NNTRVWEASSYV 232
           ++PFP+S+ VL +CV SYF++MGILT+Y ++KEK IF+VA  K+  G +   +W+ SS +
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSL 60

Query: 231 KKHDDKYNLVIV-MRDTNGNTREASVTKSFANFIDVNGTVVQNIVXNEITKLYHSRA 64
           K+ DDKY L +  +       REA  TKS A F D +GT+V +    EI++L+ S A
Sbjct: 61  KRFDDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLA 117


>CR542233-1|CAG47029.1|  123|Homo sapiens KIAA0102 protein.
          Length = 123

 Score =  101 bits (242), Expect = 2e-21
 Identities = 52/117 (44%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
 Frame = -2

Query: 402 LYPFPQSRLVLIICVSSYFILMGILTLYXTFKEKGIFVVA--KEKVG-NNTRVWEASSYV 232
           ++PFP+S+ VL +CV SYF++MGILT+Y ++KEK IF+VA  K+  G +   +W+ SS +
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSL 60

Query: 231 KKHDDKYNLVIV-MRDTNGNTREASVTKSFANFIDVNGTVVQNIVXNEITKLYHSRA 64
           K+ DDKY L +  +       REA  TKS A F D +GT+V +    EI++L+ S A
Sbjct: 61  KRFDDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLA 117


>BC082231-1|AAH82231.2|  123|Homo sapiens signal peptidase complex
           subunit 2 homolog (S. cerevisiae) protein.
          Length = 123

 Score =  101 bits (242), Expect = 2e-21
 Identities = 52/117 (44%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
 Frame = -2

Query: 402 LYPFPQSRLVLIICVSSYFILMGILTLYXTFKEKGIFVVA--KEKVG-NNTRVWEASSYV 232
           ++PFP+S+ VL +CV SYF++MGILT+Y ++KEK IF+VA  K+  G +   +W+ SS +
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSL 60

Query: 231 KKHDDKYNLVIV-MRDTNGNTREASVTKSFANFIDVNGTVVQNIVXNEITKLYHSRA 64
           K+ DDKY L +  +       REA  TKS A F D +GT+V +    EI++L+ S A
Sbjct: 61  KRFDDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLA 117


>BC070276-1|AAH70276.2|  123|Homo sapiens signal peptidase complex
           subunit 2 homolog (S. cerevisiae) protein.
          Length = 123

 Score =  101 bits (242), Expect = 2e-21
 Identities = 52/117 (44%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
 Frame = -2

Query: 402 LYPFPQSRLVLIICVSSYFILMGILTLYXTFKEKGIFVVA--KEKVG-NNTRVWEASSYV 232
           ++PFP+S+ VL +CV SYF++MGILT+Y ++KEK IF+VA  K+  G +   +W+ SS +
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSL 60

Query: 231 KKHDDKYNLVIV-MRDTNGNTREASVTKSFANFIDVNGTVVQNIVXNEITKLYHSRA 64
           K+ DDKY L +  +       REA  TKS A F D +GT+V +    EI++L+ S A
Sbjct: 61  KRFDDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLA 117


>BC008063-1|AAH08063.3|  123|Homo sapiens signal peptidase complex
           subunit 2 homolog (S. cerevisiae) protein.
          Length = 123

 Score =  101 bits (242), Expect = 2e-21
 Identities = 52/117 (44%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
 Frame = -2

Query: 402 LYPFPQSRLVLIICVSSYFILMGILTLYXTFKEKGIFVVA--KEKVG-NNTRVWEASSYV 232
           ++PFP+S+ VL +CV SYF++MGILT+Y ++KEK IF+VA  K+  G +   +W+ SS +
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSL 60

Query: 231 KKHDDKYNLVIV-MRDTNGNTREASVTKSFANFIDVNGTVVQNIVXNEITKLYHSRA 64
           K+ DDKY L +  +       REA  TKS A F D +GT+V +    EI++L+ S A
Sbjct: 61  KRFDDKYTLKLTFISGRTKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLA 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,438,635
Number of Sequences: 237096
Number of extensions: 1894725
Number of successful extensions: 3323
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3306
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)