Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_H09
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.1  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 18  PTVHCXSIPLVPRPPF 65
           PT++C S+   P PP+
Sbjct: 319 PTINCWSLTSSPPPPY 334


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 246 FIAYKEAKNRPFTYK 290
           F+ +   +++PFTYK
Sbjct: 471 FVRFTHLQHQPFTYK 485


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 153 FYCYYFYKLYI 185
           FY Y+FY  YI
Sbjct: 84  FYSYFFYLSYI 94


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +3

Query: 156 YCYYFYKLY 182
           YCYY+Y  +
Sbjct: 113 YCYYYYAFF 121


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 153 FYCYYFYKLYI 185
           FY Y+FY  YI
Sbjct: 40  FYSYFFYLSYI 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,787
Number of Sequences: 336
Number of extensions: 2807
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)