Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_H04
         (627 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6PTY2 Cluster: Kiser; n=4; Endopterygota|Rep: Kiser - ...    85   1e-15
UniRef50_Q83EW5 Cluster: Conserved domain protein; n=3; Coxiella...    37   0.45 
UniRef50_Q9V3U9 Cluster: Protein slowmo; n=7; Diptera|Rep: Prote...    36   1.1  
UniRef50_A0Q4A0 Cluster: Competence protein; n=8; Francisella tu...    34   2.4  
UniRef50_Q0LJB6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  
UniRef50_Q7QRQ5 Cluster: GLP_216_12324_9832; n=1; Giardia lambli...    33   5.6  
UniRef50_Q6MD03 Cluster: Putative bumetanide-sensitive Na-K-Cl; ...    33   7.4  
UniRef50_UPI00006CF84E Cluster: hypothetical protein TTHERM_0054...    32   9.8  

>UniRef50_Q6PTY2 Cluster: Kiser; n=4; Endopterygota|Rep: Kiser -
           Bombyx mori (Silk moth)
          Length = 228

 Score = 85.0 bits (201), Expect = 1e-15
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = -1

Query: 627 TKKSIDDITTSARRSMDDISSKAKSTLDDIEKLTKANANQRS 502
           TKKSIDDITTSARRSMDDISSKAKSTLDDIEKLTKANANQRS
Sbjct: 187 TKKSIDDITTSARRSMDDISSKAKSTLDDIEKLTKANANQRS 228


>UniRef50_Q83EW5 Cluster: Conserved domain protein; n=3; Coxiella
           burnetii|Rep: Conserved domain protein - Coxiella
           burnetii
          Length = 381

 Score = 36.7 bits (81), Expect = 0.45
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +2

Query: 440 H*CSPFSIYVLQRHAYYSSFQLLWLALALVNFSISSSVLFALDEISSIDLLADVV 604
           H CSP++ Y+    AY   F  LW  L ++ F+     LF   +I  I  L + +
Sbjct: 73  HICSPYNAYITYAKAYADHFNSLWAKLLIITFTKMFGKLFQWTKIDKIIQLNNTI 127


>UniRef50_Q9V3U9 Cluster: Protein slowmo; n=7; Diptera|Rep: Protein
           slowmo - Drosophila melanogaster (Fruit fly)
          Length = 215

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 14/23 (60%), Positives = 22/23 (95%)
 Frame = -1

Query: 627 TKKSIDDITTSARRSMDDISSKA 559
           T++SID++T SAR+SMD+IS++A
Sbjct: 183 TRRSIDEVTESARKSMDEISAQA 205


>UniRef50_A0Q4A0 Cluster: Competence protein; n=8; Francisella
           tularensis|Rep: Competence protein - Francisella
           tularensis subsp. novicida (strain U112)
          Length = 671

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = +3

Query: 189 LYIREQCLLFVIIINS*LSLYSHNALRLEPWNYEPLKNGLVSSMNPLLD 335
           + IR++CLL ++++ S  S YS++ L    +N   L  G+VS +  L D
Sbjct: 1   MLIRQRCLLIILLLISVCSSYSYDKLEEFKYNQNILLTGIVSGIPKLQD 49


>UniRef50_Q0LJB6 Cluster: Putative uncharacterized protein; n=1;
           Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
           uncharacterized protein - Herpetosiphon aurantiacus ATCC
           23779
          Length = 414

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +2

Query: 452 PFSIYVLQRHAYYSSFQLLWLALALVNFSISSSVLFAL-DEISSIDLLADVVMSSI 616
           PF  Y+LQ +  YS +  L++ + L++  +SSS L  +   I S+ ++A   MS I
Sbjct: 99  PFGDYILQTNTVYSIWNSLFILILLISVPVSSSKLVTIFQTIISLLMIASHGMSFI 154


>UniRef50_Q7QRQ5 Cluster: GLP_216_12324_9832; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_216_12324_9832 - Giardia lamblia
           ATCC 50803
          Length = 830

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 19/70 (27%), Positives = 34/70 (48%)
 Frame = -2

Query: 626 QRSQLMTSXHQQEDQWMISHLKQKAHLMI*KN*LKLMPTRGAEKRSNMHASAIHISKTDC 447
           Q  QL    HQ+  Q+ I+H +Q A     K  +  +P   AE RS+  ++ +H+   + 
Sbjct: 62  QTRQLEEQEHQRMQQYKIAHTRQVAE----KRKVSRLPAPSAEFRSSARSADLHLPTNET 117

Query: 446 TNDLPCSFVS 417
           T+    +F +
Sbjct: 118 TDHTGTTFTN 127


>UniRef50_Q6MD03 Cluster: Putative bumetanide-sensitive Na-K-Cl;
           n=1; Candidatus Protochlamydia amoebophila UWE25|Rep:
           Putative bumetanide-sensitive Na-K-Cl - Protochlamydia
           amoebophila (strain UWE25)
          Length = 764

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 18/53 (33%), Positives = 31/53 (58%)
 Frame = +3

Query: 159 IIMLRH*FTLLYIREQCLLFVIIINS*LSLYSHNALRLEPWNYEPLKNGLVSS 317
           + +L +  T   ++ Q ++FVIII S  SL++ N   L+ ++Y PL +   SS
Sbjct: 153 LTLLAYVSTNFALKIQLVIFVIIIASLYSLFTGNPANLDLYSYTPLNDSSPSS 205


>UniRef50_UPI00006CF84E Cluster: hypothetical protein
           TTHERM_00549440; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00549440 - Tetrahymena
           thermophila SB210
          Length = 947

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 111 YFHNRVHNNYLIHIYQIIMLRH*FTLLYIREQCLLFV 221
           + HNR+ N +L   YQ IML     ++YI   C+LFV
Sbjct: 526 FLHNRIINQFL---YQFIMLNIFLRIVYIFFSCILFV 559


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,389,148
Number of Sequences: 1657284
Number of extensions: 9837876
Number of successful extensions: 20008
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19997
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)