Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_G17
(380 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86; Eukary... 63 2e-09
UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42; Eutele... 46 2e-04
UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7; Dikar... 44 0.001
UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S riboso... 37 0.15
UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8; Trypano... 36 0.26
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 36 0.34
UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa... 35 0.45
UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba h... 35 0.59
UniRef50_UPI0000E4A210 Cluster: PREDICTED: similar to Spt6, part... 33 1.4
UniRef50_O42858 Cluster: Set1 complex component swd1; n=1; Schiz... 33 2.4
UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor; ... 33 2.4
UniRef50_Q8BQS6 Cluster: 4 days neonate male adipose cDNA, RIKEN... 32 3.2
UniRef50_A0YWB1 Cluster: Putative uncharacterized protein; n=2; ... 32 4.2
UniRef50_Q4SUY4 Cluster: Chromosome undetermined SCAF13836, whol... 31 5.5
UniRef50_Q7MWD0 Cluster: Lipoprotein, putative; n=1; Porphyromon... 31 5.5
UniRef50_Q8NIW5 Cluster: Putative uncharacterized protein 94C8.0... 31 5.5
UniRef50_UPI0000EBCE1B Cluster: PREDICTED: hypothetical protein;... 31 7.3
UniRef50_Q54UG9 Cluster: C2H2 type Zn finger-containing protein;... 31 9.6
UniRef50_Q8N8B5 Cluster: CDNA FLJ39715 fis, clone SMINT2013228; ... 31 9.6
UniRef50_Q5KBP3 Cluster: Putative uncharacterized protein; n=2; ... 31 9.6
UniRef50_Q2GSR1 Cluster: Putative uncharacterized protein; n=1; ... 31 9.6
>UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86;
Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila
melanogaster (Fruit fly)
Length = 117
Score = 62.9 bits (146), Expect = 2e-09
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = -1
Query: 101 LARRALIELREKGLIKQVVQHHGQVIXTRATKG 3
LA+RALIELREKGLIKQVVQHH QVI TRATKG
Sbjct: 82 LAKRALIELREKGLIKQVVQHHSQVIYTRATKG 114
Score = 54.4 bits (125), Expect = 7e-07
Identities = 30/62 (48%), Positives = 32/62 (51%)
Frame = -2
Query: 346 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLXQG 167
MPPKKDAK+SAKQPQ KLNNQVLFDK TYEKL +
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 166 SP 161
P
Sbjct: 61 VP 62
Score = 45.6 bits (103), Expect = 3e-04
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = -3
Query: 303 KKHRRRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPRMRNCXKEVPQYKLITPAVVSE 124
+K +++++ K +++ K K + KEVP YKLITP+VVSE
Sbjct: 15 QKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYKLITPSVVSE 74
Query: 123 RLKVRGXPGEKS 88
RLK+RG +++
Sbjct: 75 RLKIRGSLAKRA 86
>UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42;
Euteleostomi|Rep: 40S ribosomal protein S25 - Homo
sapiens (Human)
Length = 125
Score = 46.4 bits (105), Expect = 2e-04
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = -3
Query: 300 KHRRRRKDPV---AAKPRRRSGPKEKFVTS*TTRCCLINPRMRNCXKEVPQYKLITPAVV 130
K ++ KDPV K +++ K K KEVP YKLITPAVV
Sbjct: 14 KSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVV 73
Query: 129 SERLKVRG 106
SERLK+RG
Sbjct: 74 SERLKIRG 81
Score = 41.5 bits (93), Expect = 0.005
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1
Query: 101 LARRALIELREKGLIKQVVQHHGQVIXTRATKG 3
LAR AL EL KGLIK V +H QVI TR TKG
Sbjct: 83 LARAALQELLSKGLIKLVSKHRAQVIYTRNTKG 115
>UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7;
Dikarya|Rep: Ribosomal protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 107
Score = 43.6 bits (98), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = -1
Query: 101 LARRALIELREKGLIKQVVQHHGQVIXTRAT 9
LARRA+ L ++GLIK+VV HH Q+I TRAT
Sbjct: 75 LARRAIAFLEKEGLIKRVVHHHAQLIYTRAT 105
Score = 31.1 bits (67), Expect = 7.3
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = -3
Query: 171 KEVPQYKLITPAVVSERLKVRG 106
KEVP YKLI+ +V+ +R+K+ G
Sbjct: 52 KEVPTYKLISQSVLIDRMKING 73
>UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=4; Euarchontoglires|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Homo sapiens
Length = 102
Score = 36.7 bits (81), Expect = 0.15
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 101 LARRALIELREKGLIKQVVQHHGQVIXTRATK 6
LAR AL EL KGLIK V +H +VI TR TK
Sbjct: 60 LARAALQELLGKGLIKLVSKHRARVIYTRNTK 91
>UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8;
Trypanosomatidae|Rep: 40S ribosomal protein S25 -
Leishmania infantum
Length = 120
Score = 35.9 bits (79), Expect = 0.26
Identities = 13/19 (68%), Positives = 19/19 (100%)
Frame = -3
Query: 168 EVPQYKLITPAVVSERLKV 112
EVP+YKLITP+++S+RLK+
Sbjct: 53 EVPKYKLITPSIISDRLKI 71
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 35.5 bits (78), Expect = 0.34
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = -3
Query: 168 EVPQYKLITPAVVSERLKVRG 106
EVP+YK ITP+V+SERL++ G
Sbjct: 180 EVPKYKQITPSVLSERLRING 200
Score = 34.3 bits (75), Expect = 0.78
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -1
Query: 101 LARRALIELREKGLIKQVVQHHGQVIXTRAT 9
LARRA+ +L +GLI+ V H Q I TRAT
Sbjct: 202 LARRAINDLMTRGLIRMVSVHSSQQIYTRAT 232
>UniRef50_Q0INA0 Cluster: Os12g0489400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0489400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 95
Score = 35.1 bits (77), Expect = 0.45
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 226 HELFLWTTSSSWLCRHRILPSSSVFFEAVWPKPSRPSWAASLN 354
H LF W++S S+ RHR LP +AVW RPS +++L+
Sbjct: 47 HPLFRWSSSLSFARRHRFLPLVHSLRQAVW-SLLRPSLSSTLS 88
>UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba
histolytica|Rep: Ribosomal protein S25 - Entamoeba
histolytica
Length = 129
Score = 34.7 bits (76), Expect = 0.59
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -3
Query: 177 CXKEVPQYKLITPAVVSERLKVRGXPGE 94
C K+VP K+ITP VV++R+ + G G+
Sbjct: 53 CAKDVPSMKVITPPVVADRITITGALGK 80
>UniRef50_UPI0000E4A210 Cluster: PREDICTED: similar to Spt6,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Spt6, partial - Strongylocentrotus
purpuratus
Length = 913
Score = 33.5 bits (73), Expect = 1.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 350 KDAAQEGREGFGQTASKNTEEEGRIRWRQSQEE 252
KD +E EG G+T K+TEE+G + + EE
Sbjct: 149 KDGEEEDGEGEGETKKKDTEEDGEVADEEEMEE 181
>UniRef50_O42858 Cluster: Set1 complex component swd1; n=1;
Schizosaccharomyces pombe|Rep: Set1 complex component
swd1 - Schizosaccharomyces pombe (Fission yeast)
Length = 398
Score = 32.7 bits (71), Expect = 2.4
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +1
Query: 151 LVLWDFLX-TVSHTWVYQTTPGCSTCH---ELFLWTTSSSWLCRHRILPSSSVFFEAVWP 318
+V+WD +VS T S C + FL T S W C L S+ ++ V
Sbjct: 48 VVIWDLSTFSVSRVLTGHTRAIQSVCWSSCDRFLLTASRDWKCILWDLRDGSIVYQVVL- 106
Query: 319 KPSRPSWAASLNWHRPAEFI 378
S P W+ASL+ H+ F+
Sbjct: 107 --SAPVWSASLHPHKINTFV 124
>UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor;
n=24; Eukaryota|Rep: 40S ribosomal protein S25-A
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 108
Score = 32.7 bits (71), Expect = 2.4
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -1
Query: 101 LARRALIELREKGLIKQVVQHHGQVIXTRAT 9
LAR AL L ++G+IK + +H Q I TRAT
Sbjct: 75 LARIALRHLEKEGIIKPISKHSKQAIYTRAT 105
>UniRef50_Q8BQS6 Cluster: 4 days neonate male adipose cDNA, RIKEN
full-length enriched library, clone:B430110C06
product:hypothetical protein, full insert sequence; n=1;
Mus musculus|Rep: 4 days neonate male adipose cDNA,
RIKEN full-length enriched library, clone:B430110C06
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 141
Score = 32.3 bits (70), Expect = 3.2
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Frame = +3
Query: 117 LIFQIRQQV*LACTVGLPXYSFSYVGLS-NNTWL---FNLSRTFPLDH----FFFLALPP 272
L F I Q+ L C VGL SFS G+S W+ N S T P + F L P
Sbjct: 12 LQFYINSQLLLYCFVGLGLASFSDAGVSLLRVWMAGRVNQSVTVPANEVQITFLMLCCPH 71
Query: 273 PDPSFFFCVF 302
FFC+F
Sbjct: 72 LHSCIFFCLF 81
>UniRef50_A0YWB1 Cluster: Putative uncharacterized protein; n=2;
Oscillatoriales|Rep: Putative uncharacterized protein -
Lyngbya sp. PCC 8106
Length = 203
Score = 31.9 bits (69), Expect = 4.2
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +1
Query: 121 SFRYDSRCD*LVLWDFLXTVSHTWVYQTTPGCSTCHELFLWTTSSSWLCRH 273
SF D + L LW T W+++T G T T S WL RH
Sbjct: 151 SFYADPPVEHLDLWSSPQTARGWWLHRTLTGVETASPATAKTVLSDWLTRH 201
>UniRef50_Q4SUY4 Cluster: Chromosome undetermined SCAF13836, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13836, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 335
Score = 31.5 bits (68), Expect = 5.5
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 119 NLSDTTAGVISLYCGTSLXQFLI--RGFIKQHLVVQLVTNFSF 241
NLS TA + SL+CG L Q+ + HL Q V N++F
Sbjct: 283 NLSLLTADLFSLFCGIFLFQYSVSRNTHTHTHLTTQSVMNYTF 325
>UniRef50_Q7MWD0 Cluster: Lipoprotein, putative; n=1; Porphyromonas
gingivalis|Rep: Lipoprotein, putative - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 327
Score = 31.5 bits (68), Expect = 5.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 208 PGCSTCHELFLWTTSSSWLCRHRILPSSSVFFEAVWPKPSRPSWAASLN 354
PGC TC EL WL ++ S + ++P + +W A L+
Sbjct: 223 PGCHTCSELIRQLHQDDWL--RNLVESKQLSILFIYPDNDKNAWVAGLS 269
>UniRef50_Q8NIW5 Cluster: Putative uncharacterized protein 94C8.080;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein 94C8.080 - Neurospora crassa
Length = 1565
Score = 31.5 bits (68), Expect = 5.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 192 GLSNNTWLFNLSRTFPLDHFFFLALPPPDPS 284
GL N+ W F + T+P FF L+ PP P+
Sbjct: 1290 GLGNDDWSFYAAETYPAATFFNLSPRPPRPA 1320
>UniRef50_UPI0000EBCE1B Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 765
Score = 31.1 bits (67), Expect = 7.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 241 WTTSSSWLCRHRILPSSSVFFEAVWPKPSRPSWA 342
W TSS + + + P + A WP P+ P WA
Sbjct: 482 WXTSSQAMAQQQEQPLPITWILAKWPSPAPPRWA 515
>UniRef50_Q54UG9 Cluster: C2H2 type Zn finger-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
finger-containing protein - Dictyostelium discoideum AX4
Length = 576
Score = 30.7 bits (66), Expect = 9.6
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -3
Query: 315 PNSLKKHRRRRKDPVAAKPRRRSGPKEKFVT 223
P+ LKKH R+ D VA G KEKFVT
Sbjct: 256 PSYLKKHAARKHDGVATNICMFPGCKEKFVT 286
>UniRef50_Q8N8B5 Cluster: CDNA FLJ39715 fis, clone SMINT2013228;
n=1; Homo sapiens|Rep: CDNA FLJ39715 fis, clone
SMINT2013228 - Homo sapiens (Human)
Length = 120
Score = 30.7 bits (66), Expect = 9.6
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +1
Query: 169 LXTVSHTWVYQTTPGCSTCH---ELFLWTTSSSWLCRHRILPSSSVFFEAVWPKPSRPSW 339
L T +HTW Y+ P CS C+ ++++ T H P S + V +P+ +
Sbjct: 23 LHTHTHTWYYRCEPTCSACYTHTNIYIFKTEF-----HSYCPGWSAMRDLVSLQPATSAS 77
Query: 340 AASL--NWH 360
SL NW+
Sbjct: 78 CLSLPSNWN 86
>UniRef50_Q5KBP3 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 997
Score = 30.7 bits (66), Expect = 9.6
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -1
Query: 377 MNSAGRCQFKDAAQEGREGFGQTASKNTEEEGRIRWRQSQEEEVVQR 237
+ S G ++ A ++G EG+G + +EE ++ + ++V++R
Sbjct: 782 LQSDGASIYESAMEDGDEGYGPETDSSDDEEDAANYKMVKNDKVIRR 828
>UniRef50_Q2GSR1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 910
Score = 30.7 bits (66), Expect = 9.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 268 RHRILPSSSVFFEAVWPKPSRPSWAASLNWHRPAE 372
++ + P + F A+W + RP W + W RPAE
Sbjct: 501 KNELFPGLASFRHALW-RLQRPQWQRWVEWFRPAE 534
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,781,821
Number of Sequences: 1657284
Number of extensions: 7880889
Number of successful extensions: 24329
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 23235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24265
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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