Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_G17
         (380 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   1.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   1.6  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   3.8  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   3.8  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    23   5.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   5.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   6.6  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          22   8.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   8.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   8.7  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 315 PNSLKKHRRRRKDPVAAKPRRR 250
           P + ++HRRRR  P     RRR
Sbjct: 327 PGAAERHRRRRPPPRRRHDRRR 348


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 341  AQEGREGFGQTASKNTEEEGRIRWRQSQEEEVVQ 240
            A EGRE       +    + RIR    Q++EVV+
Sbjct: 1099 ATEGRESAHPERREQVRPQRRIRQHMPQQKEVVE 1132


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 129 SERLKVRGXPGEKSTHRA*GKRSHQ 55
           SER+   G  G  ST+ A   +SHQ
Sbjct: 808 SERMLPSGATGNNSTNSAYSMQSHQ 832


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 332 GREGFGQTASKNTEEEGRIR 273
           G  GFGQ  + NT+ EG ++
Sbjct: 505 GIVGFGQYCAANTDPEGAMK 524


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 315 PNSLKKHRRR-RKDPVAAKPRRRSGPKEKFVTS 220
           PN L++      K+PV  KP+    P+ + VT+
Sbjct: 125 PNDLQQEGETLNKEPVETKPQESEPPEMQEVTA 157


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -3

Query: 291 RRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPRMRNCXK 169
           RRR+  +A   RRR  P+ +     TTR     P  R   K
Sbjct: 492 RRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKSTK 532


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 218 QLVTNFSFGP 247
           Q+ TNFSFGP
Sbjct: 338 QVYTNFSFGP 347


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 177  SFSYVGLSNNTWLFNLSRTFPLDHFFFLALPPPD 278
            S   + L++NT      R +P ++  F AL P D
Sbjct: 1391 SLQGITLTDNTRQLFFRRHYPSNNVSFCALDPDD 1424


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 379  K*IRPADANSKMPPKKDAKASAK 311
            K ++PAD N K  P  D    A+
Sbjct: 1288 KLVQPADTNGKTSPDADGVLMAR 1310


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 379  K*IRPADANSKMPPKKDAKASAK 311
            K ++PAD N K  P  D    A+
Sbjct: 1289 KLVQPADTNGKTSPDADGVLMAR 1311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,813
Number of Sequences: 2352
Number of extensions: 7823
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)