Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_G16
(662 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 227 8e-60
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 227 8e-60
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 225 2e-59
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 145 2e-35
07_03_1358 - 25984897-25984997,25985623-25985650 47 2e-05
07_03_1357 - 25982861-25983068,25983354-25983361 40 0.002
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 33 0.27
09_05_0009 - 20048736-20049423,20049504-20049743,20049832-20050385 30 1.4
07_01_1186 + 11266210-11266517,11266608-11266656 29 3.3
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 29 3.3
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 4.4
03_06_0069 - 31449319-31450368 28 5.8
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 28 5.8
03_02_0122 - 5742530-5743705 28 5.8
02_05_0230 + 27029725-27030871,27030995-27031113,27031225-270313... 28 5.8
01_06_1594 + 38509676-38509776,38509808-38510096 28 5.8
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 28 5.8
04_04_0784 - 28044883-28045654,28046626-28046859,28047328-28047875 28 7.6
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 227 bits (554), Expect = 8e-60
Identities = 105/151 (69%), Positives = 129/151 (85%)
Frame = -3
Query: 558 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 379
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 69
Query: 378 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 199
+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+
Sbjct: 70 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARV 129
Query: 198 LIRQRHIRVRKQVVNIPSFIVRLDSGKHIDF 106
LIRQRHIRV +Q+VNIPSF+VR++S KHIDF
Sbjct: 130 LIRQRHIRVGRQIVNIPSFMVRVESEKHIDF 160
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 95 SPFGGGRPGRVQEEEPPAREQGGGAANDEEE 3
SPFGGG PGRV+ + GGG +E+E
Sbjct: 164 SPFGGGPPGRVKRKNQKKASGGGGDGEEEDE 194
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 227 bits (554), Expect = 8e-60
Identities = 105/151 (69%), Positives = 129/151 (85%)
Frame = -3
Query: 558 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 379
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 226 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 285
Query: 378 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 199
+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+
Sbjct: 286 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARV 345
Query: 198 LIRQRHIRVRKQVVNIPSFIVRLDSGKHIDF 106
LIRQRHIRV +Q+VNIPSF+VR++S KHIDF
Sbjct: 346 LIRQRHIRVGRQIVNIPSFMVRVESEKHIDF 376
Score = 34.3 bits (75), Expect = 0.088
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 95 SPFGGGRPGRVQEEEPPAREQGGGAANDEE 6
SPFGGG PGRV+ + GGG N +
Sbjct: 380 SPFGGGPPGRVKRKNQKKASGGGGDVNSND 409
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 225 bits (551), Expect = 2e-59
Identities = 105/149 (70%), Positives = 128/149 (85%)
Frame = -3
Query: 552 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 373
KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R
Sbjct: 35 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRR 94
Query: 372 LFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILI 193
+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LI
Sbjct: 95 IFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLI 154
Query: 192 RQRHIRVRKQVVNIPSFIVRLDSGKHIDF 106
RQRHIRV +Q+VNIPSF+VR++S KHIDF
Sbjct: 155 RQRHIRVGRQIVNIPSFMVRVESEKHIDF 183
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 95 SPFGGGRPGRVQEEEPPAREQGGGAANDEEE 3
SPFGGG PGRV+ + GGG +E+E
Sbjct: 187 SPFGGGPPGRVKRKNQKKASGGGGDGEEEDE 217
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 145 bits (352), Expect = 2e-35
Identities = 74/127 (58%), Positives = 91/127 (71%)
Frame = -3
Query: 558 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 379
+ KT+ PRRP+EK R D ELK+ GEYGLR+K E+WRV+ ELLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNP 58
Query: 378 KRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 199
+R+FEG ALLR + R G+L E Q KLDYVL L +E+FL+ RLQT VFK G KSIHH +
Sbjct: 59 RRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHV 118
Query: 198 LIRQRHI 178
LIRQ HI
Sbjct: 119 LIRQHHI 125
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = -3
Query: 558 FSKTYVTPRRPFEKARLDQELKIIGEYG 475
+ KT+ PRRP+EK RLD ELK++GEYG
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYG 37
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -3
Query: 177 RVRKQVVNIPSFIVRLDSGKHIDF 106
RV +Q+VNIPSFIVRL+S KHI F
Sbjct: 3 RVGRQLVNIPSFIVRLESEKHIAF 26
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 32.7 bits (71), Expect = 0.27
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = -3
Query: 396 LEEKDPKRLFEGNALL-RRLVRIGVLDEKQMKLDYVLGLKIEDFLE---RRLQTQVFKAG 229
L E+D + + G L+ ++LV I KQM ++ D L RRL T + K
Sbjct: 37 LVERDDYKKYNGICLMVQKLVNI----IKQMDPRDPYRAEMTDMLLDKLRRLATVMVKLK 92
Query: 228 LAKSIHHARILIRQRHIRVRKQVVNIPSFIV 136
A+ + A I+Q H+RV + V P+F+V
Sbjct: 93 FAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123
>09_05_0009 - 20048736-20049423,20049504-20049743,20049832-20050385
Length = 493
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 149 HHLLCAWTLASTLTSLVKSPFGGGRPGRVQEEEPPAREQG 30
H C W A T S+ SP+ GGR V+E AR +G
Sbjct: 109 HDGFCLWPSAHTAHSVRASPWRGGRGDVVREFADAARARG 148
>07_01_1186 + 11266210-11266517,11266608-11266656
Length = 118
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 86 GGGRPGRVQEEEPPAREQGGGA 21
GGGRPGR ++ + R Q GG+
Sbjct: 51 GGGRPGRGRQAQAQCRAQAGGS 72
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 262 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPIIYCA 134
A+S G SW CQ++DPAK Y+ Q H I+ A
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGV-HGRIFAA 435
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 279 IEDFLERRLQTQVFKAGLAKSIHHAR 202
+ED+ E L T F A L KS+H AR
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135
>03_06_0069 - 31449319-31450368
Length = 349
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 207 HDGWTSPGQL*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYE 338
HD +S G L P+SA +P + SDQ H VS+ P Y+
Sbjct: 237 HDVLSSLG-LKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYD 279
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 86 GGGRPGRVQEEEPPAREQGGGAANDEEE 3
GGG G EE P A +GG +EEE
Sbjct: 53 GGGEGGAEGEEGPDAAARGGEEGKEEEE 80
>03_02_0122 - 5742530-5743705
Length = 391
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Frame = -1
Query: 86 GGGRPGRVQEEE----PPAREQGGGAANDEEE 3
GGG GR +E++ P A GGG +EEE
Sbjct: 286 GGGHGGRYEEDDYKKKPSAHSGGGGGRYEEEE 317
>02_05_0230 +
27029725-27030871,27030995-27031113,27031225-27031349,
27031491-27031590,27031680-27031757,27032818-27032901,
27033077-27033162,27033869-27034049,27034596-27034646
Length = 656
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 492 SSTLGQDVPFQKDDEVSRTSLKIPTVLCCSPSWRARTHCSPIRIXKAS 635
S+ +D F++DD S + +PT LC S S A + S + K++
Sbjct: 190 STEFKKDQSFRRDDNHSSQTRNMPTELCTSSSEEAHIYESSLHGTKSN 237
>01_06_1594 + 38509676-38509776,38509808-38510096
Length = 129
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 86 GGGRPGRVQEEEPPAREQGGGAANDEE 6
GGG GR EEEP ++GGGA+ E+
Sbjct: 51 GGGGGGR--EEEPALGKKGGGASGRED 75
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 504 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 382
Q L+ I G+ + +E++ + +L RIR R LT+E D
Sbjct: 212 QRLQTIHLLGIDDNQEIFTTQTSLTRIRAVPRYSLTIESLD 252
>04_04_0784 - 28044883-28045654,28046626-28046859,28047328-28047875
Length = 517
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 149 HHLLCAWTLASTLTSLVKSPFGGGRPGRVQEEEPPAREQGGG 24
H C W A T S+ SP+ GG V E AR +G G
Sbjct: 107 HDGFCLWPSALTNYSVAASPWKGGAGDVVGELAAAARAEGIG 148
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,429,184
Number of Sequences: 37544
Number of extensions: 441946
Number of successful extensions: 1543
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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