Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_G14
         (625 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435...    28   6.9  
08_02_0512 + 18012909-18013025,18013656-18013751,18014102-180143...    27   9.2  

>01_07_0290 -
           42542201-42542359,42542443-42542551,42542729-42543516,
           42543601-42543744,42543840-42544013,42544056-42544369,
           42544467-42544636,42544916-42545043,42545125-42545185,
           42545473-42545642,42545783-42547387,42547479-42547631,
           42547747-42547905,42548066-42548236,42548357-42548404,
           42548509-42548624,42548885-42549029,42549122-42549220
          Length = 1570

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = -2

Query: 615 NKCIECG---RACLKRVEIESCYENVNIYF 535
           N+C+E     RACL+R+++E C   ++I +
Sbjct: 861 NECMERALTIRACLRRIKLEDCTTEISIKY 890


>08_02_0512 +
           18012909-18013025,18013656-18013751,18014102-18014389,
           18014551-18014750,18015313-18015548,18015809-18015951,
           18016059-18016130,18016231-18016458
          Length = 459

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 449 RFKF*TNMCCFT*YTITVPSRFPNNVFSDKK 357
           RF + T +C F     T PSR P N FS K+
Sbjct: 49  RFSWQTFLCLFLVVANTEPSRHPKNSFSWKE 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,268,946
Number of Sequences: 37544
Number of extensions: 223990
Number of successful extensions: 418
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)