Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_G14
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical pr...    31   0.67 
U23529-1|AAK39160.1|  269|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z75955-7|CAB00121.1|  550|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z71266-8|CAA95846.2|  729|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z81111-7|CAB03270.1|  342|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z81099-5|CAB03190.1|  342|Caenorhabditis elegans Hypothetical pr...    27   8.2  
U97189-9|AAC48161.1|  263|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z81479-8|CAB03946.1| 1181|Caenorhabditis elegans Hypothetical protein
            C34F6.9 protein.
          Length = 1181

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -3

Query: 431  NMCCFT*YTITVPSRFPNNVFSDKKSNSHPKNQSNINNGQCFLCIL 294
            N  C+    + +  R P  V+S  +S+SH K ++N    +CFLC+L
Sbjct: 875  NTLCYAISMVQLLMRVPQ-VYSIVRSHSHKKQKAN--RSECFLCML 917


>U23529-1|AAK39160.1|  269|Caenorhabditis elegans Hypothetical
           protein C15B12.2 protein.
          Length = 269

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 199 YL*KHNYYYDSHKLCKSF 146
           Y  +HN +Y  HKLC+SF
Sbjct: 86  YTCRHNSFYHRHKLCRSF 103


>Z75955-7|CAB00121.1|  550|Caenorhabditis elegans Hypothetical
           protein R07B7.12 protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 313 NVSYVFCNKTTNLMCTKSNLPSRNINYRNALAILIKICYL 194
           N+S  +CN++T  +C+K  L  R+     +L +   I +L
Sbjct: 17  NLSLPYCNRSTGRICSKIRLYHRSFRSNPSLQMCFIIVFL 56


>Z71266-8|CAA95846.2|  729|Caenorhabditis elegans Hypothetical
           protein R06C7.9 protein.
          Length = 729

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 268 YTSNWWFCYKIHKKHCP 318
           Y + +WF Y  HKKHCP
Sbjct: 383 YQNEYWFDY--HKKHCP 397


>Z81111-7|CAB03270.1|  342|Caenorhabditis elegans Hypothetical
           protein T01G5.5 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +3

Query: 489 YVTMYFCACLILFTLKNIYL 548
           ++ +YFC C I+F+L +I++
Sbjct: 45  HLMIYFCCCSIMFSLMDIFI 64


>Z81099-5|CAB03190.1|  342|Caenorhabditis elegans Hypothetical
           protein T01G5.5 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +3

Query: 489 YVTMYFCACLILFTLKNIYL 548
           ++ +YFC C I+F+L +I++
Sbjct: 45  HLMIYFCCCSIMFSLMDIFI 64


>U97189-9|AAC48161.1|  263|Caenorhabditis elegans Hypothetical
           protein C48B6.9 protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 474 VHK*IYVTMYFCACLILFTLKNIYLHFHNMIRFL 575
           VH  + + ++   C  LFT+  +  HF N  RFL
Sbjct: 78  VHWNMLLLLFMSVCSALFTVVALQFHFSNAERFL 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,831,718
Number of Sequences: 27780
Number of extensions: 254259
Number of successful extensions: 548
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)