Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_G10
(762 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0070 - 706640-706747,707221-707307,707397-707502,707585-70... 53 2e-07
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 33 0.19
02_01_0564 - 4136114-4136566,4136977-4137047,4137197-4137275,413... 33 0.19
01_05_0012 + 17147764-17148141,17148316-17148465,17149360-171497... 32 0.43
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 31 0.76
08_01_1069 + 10916376-10916448,10917331-10918031,10918222-109184... 30 1.7
01_06_1097 + 34507376-34507395,34509380-34511214,34511263-345115... 30 1.7
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458... 30 2.3
02_02_0288 - 8603033-8603436,8603611-8603862,8604530-8605022 29 3.1
10_08_1022 + 22337332-22339398 29 4.0
05_07_0192 - 28314224-28316287 29 5.3
10_08_0502 - 18369491-18369592,18369782-18369906,18370824-183708... 28 7.1
05_04_0182 - 18814642-18815175,18815180-18815195,18815468-188155... 28 7.1
04_01_0021 + 311914-312399,314218-314310,314391-314672,314754-31... 28 7.1
01_07_0094 - 41049644-41050214,41050441-41050688,41050887-41051168 28 7.1
01_01_0473 - 3478660-3480338,3480507-3480609 25 7.9
12_02_0927 + 24473634-24474236,24474464-24474518,24474579-24474952 28 9.3
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 28 9.3
>04_01_0070 -
706640-706747,707221-707307,707397-707502,707585-707693,
707766-708145,708508-708601,709351-709475,709633-709674,
710822-710892,710979-711060,711157-711277,712404-712713
Length = 544
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = -1
Query: 300 EKKLDSLVITCK-EDPQNIFLELVNFIKPGRPFVIYYNVSEPLQNLYLALKSQSNVAALK 124
E SL++ D ++ +L+ + PF IY+ +PL +L+ L+
Sbjct: 440 EHGFSSLIVAAPGHDVESFVADLLPLLSYSAPFAIYHQYLQPLATCMHSLQVSKMALGLQ 499
Query: 123 LTSNWMRNYQVLPERTRPDVMMN 55
++ W+R YQVLP RT P + MN
Sbjct: 500 ISEPWLREYQVLPSRTHPHMQMN 522
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 495 EIPITESN-QLKRKLVENDNEPRRKIAKPDEEVSEPVIDELKENSNKG 355
E I ES+ +L+ + VE DN+P +K+ P EVS+ D+ + NKG
Sbjct: 409 EDEIMESDIELEGEAVEPDNDPPQKMGDPSVEVSDEKRDQAQLCKNKG 456
>02_01_0564 -
4136114-4136566,4136977-4137047,4137197-4137275,
4137380-4137535,4137867-4137938,4138081-4138161,
4138237-4138302,4138482-4138547,4138648-4138698,
4138982-4139109,4139239-4139377,4139606-4139643,
4139679-4139748,4140194-4140277
Length = 517
Score = 33.5 bits (73), Expect = 0.19
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = -1
Query: 555 YSALRQFYQGCDTNSNENIKEIPITESNQLK---RKLVENDNEPRRKIAKPDEEVSEPVI 385
+ LRQ E I+E P N ++ RKLV D E + KP EE +
Sbjct: 236 FPTLRQPPSSFIATMEEYIREAPRPSINSVENGERKLVTYDQEATEESEKPAEEEKDEPA 295
Query: 384 DELKENSNKGDPKIPK 337
+ +E K +PK P+
Sbjct: 296 ESEQEQEPKQEPKPPE 311
>01_05_0012 +
17147764-17148141,17148316-17148465,17149360-17149729,
17149898-17150015,17150121-17150226,17150326-17150418,
17150498-17150593,17151169-17151891,17152012-17152160,
17153434-17153520,17153541-17153625
Length = 784
Score = 32.3 bits (70), Expect = 0.43
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Frame = -1
Query: 570 ISVNVYSALRQFYQGCDTNSNENIKEIPITESNQLKRKLVENDNEPRRKIAKPDEEVSEP 391
I +Y L+ DT + I++ + ++ + + + +D K K D+EVSE
Sbjct: 664 IEEKIYYQLQDALAKLDTRTRRCIRDSLLRLAHSVSERQITSDRSSANKSNKDDDEVSED 723
Query: 390 VIDELKENSNKGD----PKIPKWHFDNIYAAQILE-KKLDSLVITCKED 259
E+S + K P+W ++ A ++ K ++I C D
Sbjct: 724 TSKRRFEDSYRRTWGTIRKSPEWARNDTAAFTVIFCSKTSEIIILCVSD 772
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 31.5 bits (68), Expect = 0.76
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = -1
Query: 597 FPEEQLKRCISVNVYSALRQFYQGCDTNSNENIKEIPITESNQLKRKLVENDNEPRRK-I 421
F + Q + + YS R+ ++ C + E +KE + RK E + + RRK
Sbjct: 706 FEDSQEYKALDSETYS--RELFEECVVHLKERLKEKERLREEEKARKEKEREEKERRKEK 763
Query: 420 AKPDEEVSEPVIDELKE-NSNKGDPKIPKWHFD 325
K ++E E D+ KE +KG + K D
Sbjct: 764 EKKEKERKEKERDKEKEREKDKGKDRSRKDEMD 796
>08_01_1069 + 10916376-10916448,10917331-10918031,10918222-10918443,
10918526-10919351,10919437-10919574,10920431-10920569,
10920655-10920781,10921895-10921936,10922089-10922160,
10922491-10922589,10922694-10922735,10922947-10923027,
10923129-10923179,10923265-10923346,10923741-10923835,
10924739-10924810,10924907-10925023,10925176-10925244,
10925507-10925573,10925709-10925950
Length = 1118
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/91 (25%), Positives = 44/91 (48%)
Frame = -1
Query: 633 NMSQKQALLAMNFPEEQLKRCISVNVYSALRQFYQGCDTNSNENIKEIPITESNQLKRKL 454
N+ + LA+ F E+ RC V L+ F + + +EN K++ + + K+ L
Sbjct: 1015 NVGRNADALALYFGEDPA-RCPFEQVVITLQNFVRLFVRSHDENCKQLDL----EKKKAL 1069
Query: 453 VENDNEPRRKIAKPDEEVSEPVIDELKENSN 361
E + E +K + ++ EP D+ K N++
Sbjct: 1070 KEAEAEKTKKEPENAQKTKEPGNDKAKHNNS 1100
>01_06_1097 + 34507376-34507395,34509380-34511214,34511263-34511598,
34511800-34513691
Length = 1360
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = -1
Query: 537 FYQGCDTNSNENIKEIPITESNQLKRKLVENDNEPRRKIAKPDEEVSEPVIDELKENSNK 358
F GCD + + + + S+ ++ +LVEN I+ E +ID LKE +
Sbjct: 874 FEVGCDVSPSSEVVPSCLQASDSIQSRLVENKEVSNPFISIASETNKVDMID-LKEETAA 932
Query: 357 GDPKIPKWHFDNIYAAQILEKKLD 286
G P D IY + + +D
Sbjct: 933 GYPLDSDDDADKIYPEPMEDNVID 956
>10_08_0429 +
17845303-17845431,17845508-17845684,17845782-17845895,
17846386-17846520,17847659-17847790,17847919-17848071,
17848574-17848709,17849338-17849443,17849538-17849730,
17849803-17849963,17850227-17850442,17850732-17850997,
17851505-17851779,17851871-17852327,17853973-17854055,
17854260-17854469,17854897-17855373,17855462-17855743,
17855910-17856236,17856418-17856507,17856788-17856899,
17857004-17857104,17857524-17857568
Length = 1458
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 330 FDNIYAA-QILEKKLDSLVITCKEDPQNIFLELVNFIKPGRPFVIYYN 190
FDN+ + QI + DSL++ +E P N F + N ++ R + Y+
Sbjct: 216 FDNLKSKLQIFSDEFDSLLVGLQESPSNKFKDTDNILETSRKSLSRYH 263
>02_02_0288 - 8603033-8603436,8603611-8603862,8604530-8605022
Length = 382
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = -1
Query: 645 MHPGNMSQKQALLAMNFPEEQLKRCISVNVY-SALRQFYQGCDTNSNENIKEIPITESNQ 469
+H G +S+ +A +A ++ + ++ ++ + L Y +T + + ++
Sbjct: 155 IHGGPLSRPRAEIAGLVGDDTFQETVTSELFRTTLGMIYNAIETVAGSSSPTSNLSLIEL 214
Query: 468 LKRKLVENDNEPRRKIAKPDEEVSEPVIDE 379
+K K+ + N RRK DE+ E ID+
Sbjct: 215 VKLKIKKCTNASRRKDDNDDEDTDEEEIDD 244
>10_08_1022 + 22337332-22339398
Length = 688
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 537 FYQGCDTNSNENIKEIPITESNQLKRKLV--ENDNEPRRKIAKPDEEVSEPVID 382
+Y+GCD + + P + Q RK V E ++ A PDE V E V D
Sbjct: 97 YYKGCDDDKRKQRSSTPAAAAEQEHRKRVLRELNSLIAGAGAAPDEAVEEEVTD 150
>05_07_0192 - 28314224-28316287
Length = 687
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 717 GSNGLVAAALLSSIGQNTNGRLVHMHPGNMSQKQALLAMNFPEEQLKRCISVNVY--SAL 544
GS +V + ++ ++GQ + V + S K+ +L + LKR + +NVY SAL
Sbjct: 197 GSTSIVRS-MVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSAL 255
Query: 543 RQFYQGCD 520
Y CD
Sbjct: 256 VDMYGKCD 263
>10_08_0502 -
18369491-18369592,18369782-18369906,18370824-18370875,
18372166-18372747
Length = 286
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 450 ENDNEPRRKIAKPDEEVSEPVIDEL-KENSNKGDPK 346
+ + E RR+ KPDE E V+D + KE N P+
Sbjct: 18 KKEKEKRRRKHKPDEAKEEMVVDAIPKEEENLKSPE 53
>05_04_0182 -
18814642-18815175,18815180-18815195,18815468-18815557,
18815838-18815902
Length = 234
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -1
Query: 438 EPRRKIAKPDEEVSEPVIDELKENSNKGD 352
EPR +I+ +EEV V+D ++ S++G+
Sbjct: 50 EPRSQISSEEEEVGVGVMDRQRQQSSRGN 78
>04_01_0021 +
311914-312399,314218-314310,314391-314672,314754-314826,
315273-315405,315476-315629,315763-315843,316174-316296,
316629-316787,316862-316996,317159-317254,317416-317910,
318651-318722,319496-319537
Length = 807
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -1
Query: 519 TNSNENIKEIPITESNQLKRKLVENDNEPRRKIAKPDEEVSEPVIDELKENSN 361
T +E + + L + +NDN +++ + S IDE+K NSN
Sbjct: 635 TVKDEEVIDSSKNSGENLDSSMQKNDNGESQQLGDAPADSSSSAIDEIKGNSN 687
>01_07_0094 - 41049644-41050214,41050441-41050688,41050887-41051168
Length = 366
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = -1
Query: 525 CDTNSNENIKEIPITESNQLKRKLVENDNEPRRKIAKPDEEVSEPVIDELKENSNKGDPK 346
C ++E IK + + +L+R+L P R I D+ V+D+ + +
Sbjct: 9 CAEKASEIIKIGQVDDVQELQRRLCSATTVPERYIRDGDDRPDHAVVDD-----ERAQER 63
Query: 345 IPKWHFDNIYAAQILEKKLDSLVITCKE 262
IP + E +LD+L + C++
Sbjct: 64 IPVIDVGELQRGS--EDELDNLRLACEQ 89
>01_01_0473 - 3478660-3480338,3480507-3480609
Length = 593
Score = 25.4 bits (53), Expect(2) = 7.9
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = -1
Query: 561 NVYSALRQFYQGCDTNSNENIKEIPITESNQLKRKLVENDNEPRR--KIAKPDEEVSEP 391
N Y R + D + E K IP + +Q + E+D+E + KPD E + P
Sbjct: 74 NFYRMYRALAERYDNVTGELRKNIPSSLQSQGSLSISESDSETQSAPPTPKPDSEETTP 132
Score = 21.0 bits (42), Expect(2) = 7.9
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 399 SEPVIDELKENSNKGDP 349
S+ +DEL+E++ G P
Sbjct: 170 SDSEVDELREDNGDGSP 186
>12_02_0927 + 24473634-24474236,24474464-24474518,24474579-24474952
Length = 343
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -1
Query: 489 PITESNQLKRKLVENDNEPRRKIAKP-DEEVSEPVIDEL---KENSNKGDPKIPKWHFDN 322
P+ +S+ KRKLV +D+E +P D E ++ + + K+ S++ PKI K N
Sbjct: 269 PVGQSDSRKRKLVLSDDEADDTTRRPGDRETTKKLPKQATPRKKTSSRPVPKIRKSSRCN 328
Query: 321 IY 316
Y
Sbjct: 329 SY 330
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -1
Query: 522 DTNSNENIK---EIPITESNQLKRKLVENDNEPRRKIAKPDEEVSEPVIDELKENSN 361
D++ N N+K E ++E N K+KLVE+ + E++ + ++ KE S+
Sbjct: 159 DSSDNNNLKTKVEDALSEENGWKQKLVEDREAKEESLEAEIEKLKQNTEEQAKEISD 215
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,965,279
Number of Sequences: 37544
Number of extensions: 290717
Number of successful extensions: 820
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -