Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_G07
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0276 + 23771233-23771268,23773552-23773897,23774425-237745... 121 5e-28
03_05_1050 - 29966031-29966076,29966180-29966232,29966420-299668... 96 2e-20
02_05_0970 - 33179180-33179210,33179297-33179441,33180307-331803... 89 4e-18
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574... 60 2e-09
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 51 1e-06
07_03_0762 + 21324550-21325414,21325606-21325746,21325993-213261... 31 1.2
11_01_0545 + 4308167-4308496 30 1.5
04_04_0585 - 26386248-26386271,26386510-26386699,26387363-263874... 29 2.7
03_06_0080 - 31512792-31513046,31514087-31514202,31514797-315149... 29 2.7
05_02_0067 + 6298232-6298294,6298532-6299068 29 4.7
03_06_0019 - 31078669-31080081 29 4.7
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 29 4.7
06_01_0072 + 596333-597442 28 6.2
01_06_1319 - 36267285-36267992 28 8.2
>05_05_0276 +
23771233-23771268,23773552-23773897,23774425-23774541,
23774712-23774810,23774949-23775016,23775107-23775181,
23775386-23775931,23776040-23776092,23776163-23776204,
23776314-23776458,23776541-23776651,23777496-23777921,
23778116-23778373
Length = 773
Score = 121 bits (292), Expect = 5e-28
Identities = 69/173 (39%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
Frame = -3
Query: 579 PDTMIPNQFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLNLTFAGPWADT 400
PD P +G+ GLL ++ E P+ SLALG DLT LGL++NS DNL TF PW+
Sbjct: 351 PDPYDP--YGLHGLLRVMKLKEEGPA--SLALGIDLTTLGLDMNSSDNLYKTFGSPWSSE 406
Query: 399 PCRPQDMDYHVPPEYLINGSIREKLAPLRLGRYKEDLLFYLFYCFVGDVLQIAAAAELYN 220
P + ++ Y +P Y + L L R+ LFY+FY D Q+ AA E+
Sbjct: 407 PVK-EEYSYEIPDCY--SSMQPPPLQALHFLRFHLMTLFYIFYSMPQDAAQLYAANEICK 463
Query: 219 REWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVPKE-FHLDY 64
W YH E + W+ +AP + KT+TYE+G Y FDA+ W +PK+ F L Y
Sbjct: 464 YGWVYHKELRQWVKRAPNTTPLVKTTTYEQGLCYLFDANIWDAIPKDNFILRY 516
>03_05_1050 -
29966031-29966076,29966180-29966232,29966420-29966845,
29966983-29967060,29967135-29967220,29969054-29969155,
29969221-29969427,29970528-29970885,29971011-29971174,
29971258-29971366,29971595-29971600
Length = 544
Score = 96.3 bits (229), Expect = 2e-20
Identities = 50/113 (44%), Positives = 70/113 (61%)
Frame = -3
Query: 564 PNQFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLNLTFAGPWADTPCRPQ 385
P+ +G++GLL IR ++D L SLALG DLT LGLNLNSPDNL TF PW++ P + +
Sbjct: 437 PDPYGLMGLLGVIRMNDAD--LASLALGMDLTTLGLNLNSPDNLYKTFGSPWSNEPAKGE 494
Query: 384 DMDYHVPPEYLINGSIREKLAPLRLGRYKEDLLFYLFYCFVGDVLQIAAAAEL 226
++H+P Y N L P+ +++ LFY+FY D Q+ AA+EL
Sbjct: 495 P-EFHIPACY--NAEQPPPLQPIHFQKFQTLTLFYIFYSMPRDEAQLCAASEL 544
>02_05_0970 -
33179180-33179210,33179297-33179441,33180307-33180362,
33180650-33180691,33180814-33180866,33181059-33181490,
33181630-33181707,33181785-33181870,33183588-33183689,
33183754-33183960,33184976-33185336,33185463-33185626,
33185709-33185817,33186468-33186485
Length = 627
Score = 88.6 bits (210), Expect = 4e-18
Identities = 48/110 (43%), Positives = 66/110 (60%)
Frame = -3
Query: 555 FGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLNLTFAGPWADTPCRPQDMD 376
+G++GLL IR +D L SLALG DLT LGLNLNSPDNL TF PW++ P + + +
Sbjct: 447 YGLMGLLGVIRM--NDVDLSSLALGIDLTTLGLNLNSPDNLYKTFGSPWSNEPAKGEP-E 503
Query: 375 YHVPPEYLINGSIREKLAPLRLGRYKEDLLFYLFYCFVGDVLQIAAAAEL 226
+H P Y + L P+ +++ LFY+FY D Q+ AA+EL
Sbjct: 504 FHTPACY--SAEQPPPLQPIHFQKFQTPTLFYIFYSMPRDEAQLCAASEL 551
>03_05_1049 -
29956379-29956400,29957103-29957188,29957269-29957413,
29958518-29958813,29959242-29959253
Length = 186
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = -3
Query: 225 YNREWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVPKE-FHLDYSKTGG 49
YNR W YH E +VW+++ P + + KT YERG+Y FD +NW + K+ F L Y +
Sbjct: 104 YNRGWFYHKEVRVWLTRIPNVEPLVKTPHYERGSYGCFDPNNWETIRKDNFVLHYDQIEK 163
Query: 48 SAAV 37
A+
Sbjct: 164 KPAI 167
>03_05_0520 +
25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/64 (40%), Positives = 33/64 (51%)
Frame = -3
Query: 294 DLLFYLFYCFVGDVLQIAAAAELYNREWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYF 115
DLLF+ FY Q +A EL + WR+H + W Q P V T YERG+Y +
Sbjct: 754 DLLFFAFYYQQNTYQQFLSARELKKQSWRFHRKYNTWF-QRHVEPQV-TTDEYERGSYVY 811
Query: 114 FDAH 103
FD H
Sbjct: 812 FDFH 815
>07_03_0762 +
21324550-21325414,21325606-21325746,21325993-21326177,
21326200-21326410,21326526-21326769,21326853-21327003,
21327089-21327439
Length = 715
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Frame = +3
Query: 372 DNPCP-VVCKVYPPMGQQTSS*GYQVNLN----SILKQSNPVP-MLATLD*GPIP 518
D P P V+C YPP G + + YQVNL+ ++ K ++ P M AT G +P
Sbjct: 33 DEPPPWVLCGPYPPSGNYSKNGTYQVNLDLLSTTLPKNTSSSPAMYATGTVGDVP 87
>11_01_0545 + 4308167-4308496
Length = 109
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 577 GYNDTKPIWNSRSIDFYPCCGIG 509
GYN W S+ I Y CCG G
Sbjct: 80 GYNPGSACWTSKDIKLYCCCGHG 102
>04_04_0585 -
26386248-26386271,26386510-26386699,26387363-26387463,
26387554-26387685,26387759-26387857,26387956-26388127,
26388217-26388512,26388601-26388726,26388848-26389062,
26389154-26389225,26389299-26389368,26389441-26389517,
26389605-26389923,26390034-26390225,26390321-26390551,
26390585-26390950,26392251-26392313,26392394-26392456,
26392544-26392642,26393497-26393523,26394299-26394358,
26395230-26396147,26396243-26397268
Length = 1645
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = -1
Query: 197 RRRCGSHKRPACQWSRRL-----QRTNAAPTTSSTRTIGERCRKSFIWITARLEGRPQLP 33
R+R GSH+R SRR+ +R ++ P T+S + + + AR +GR P
Sbjct: 205 RKRSGSHERSGGSGSRRVSRSPGRRADSVPATASGERASRQQPGKMVSVPAREKGRAPSP 264
>03_06_0080 -
31512792-31513046,31514087-31514202,31514797-31514911,
31514997-31515056,31515619-31515688,31515952-31515986,
31516094-31516231,31516369-31516737
Length = 385
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 414 PWAD-TPCRPQDMDYHVPPEYLINGSIREK 328
PW TPC D+ + VPPE+ +G + K
Sbjct: 149 PWTQPTPCSHVDLKFPVPPEHCTSGIMDNK 178
>05_02_0067 + 6298232-6298294,6298532-6299068
Length = 199
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 244 CG-CSRVIQSRMAISYGGEGVDLTSARHANGREDFNVRTR 128
CG C+ ++ RM GG GV+ H DFN TR
Sbjct: 105 CGLCAEAVRERMRGGGGGGGVEAALRWHMEVCRDFNSTTR 144
>03_06_0019 - 31078669-31080081
Length = 470
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = -2
Query: 250 TNCGCSRVIQSRMAISYGGE--GVDLTSAR----HANGREDFNVRTRHLLLLRRAQLEKG 89
T R++ + S+GGE GVD+ S H + R D T LLL ++LEK
Sbjct: 41 TEVNHGRILGALDDASHGGELGGVDMVSISDGLGHGDDRSDLGRLTESLLLAMPSELEKL 100
Query: 88 AERVS 74
R++
Sbjct: 101 VGRIN 105
>02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 528 IRAAESDPSLVSLALGQDLTALGLNLNSPDNL 433
++A SDP++ L L + LGLNL S D L
Sbjct: 2219 VKAFNSDPTIDVLLLTTHVGGLGLNLTSADTL 2250
>06_01_0072 + 596333-597442
Length = 369
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 471 TALGLNLNSPDNLNLTFAGPWA 406
++LGL LN P NL AGPW+
Sbjct: 119 SSLGLFLNCPKNLRNDDAGPWS 140
>01_06_1319 - 36267285-36267992
Length = 235
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 72 LDYSKTGGSAAVTAPCAHVAHPR 4
LD + GGSA VT PC H HP+
Sbjct: 93 LDDLEPGGSAVVT-PCDHAYHPQ 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,903,555
Number of Sequences: 37544
Number of extensions: 434154
Number of successful extensions: 1268
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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