Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_G07
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.7  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   6.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.5  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 546 LFQIGLVSLYPVCLLLCLQEKSVFLCASCLVR 641
           +F I L  L+  C +LC     + LCA  L R
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILNLCAIALDR 134


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 546 LFQIGLVSLYPVCLLLCLQEKSVFLCASCLVR 641
           +F I L  L+  C +LC     + LCA  L R
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILNLCAIALDR 134


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 548 IPNWFGIIVSGMFVTL 595
           +PNW  ++++G+F  L
Sbjct: 32  LPNWTDLVLAGLFTML 47


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 546 LFQIGLVSLYPVCLLLCLQEKSVFLCASCLVR 641
           +F I L  L+  C +LC     + LCA  L R
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILNLCAIALDR 134


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 224 YNSAAAAICKTSPTKQ*NK*NNRSSLYLPSRRGASFSLIEP 346
           +N +AAAI  TSP+         SS   PS   + FS + P
Sbjct: 69  FNDSAAAITSTSPSYP----GGGSSSPSPSSPSSFFSSVSP 105


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 547 SRSIDFYPCC 518
           SR+ ++YPCC
Sbjct: 223 SRNEEYYPCC 232


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 420  AGPWADTPCRPQDMDYHVPPEYLINGSIRE 331
            AG W     +PQ +   +  EY  N  I E
Sbjct: 931  AGGWQSIYAQPQTVQDQIVSEYYQNKPISE 960


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,559
Number of Sequences: 438
Number of extensions: 4227
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)