Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_G03
(770 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.0
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 23 2.0
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 23 3.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.6
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 4.7
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 21 8.2
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 21 8.2
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 276 WMPTTSLNSLSRLKQQ*RRLKITTPWSLLFTQVQ 175
WMP+T N L L +KI S+L+ Q
Sbjct: 853 WMPSTMANILDLLMDYEHTVKINENISMLYIGYQ 886
Score = 22.2 bits (45), Expect = 4.7
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 514 AWVWQFWLL 540
AW+W WLL
Sbjct: 451 AWIWLVWLL 459
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 276 WMPTTSLNSLSRLKQQ*RRLKITTPWSLLFTQVQ 175
WMP+T N L L +KI S+L+ Q
Sbjct: 853 WMPSTMANILDLLMDYEHTVKINENISMLYIGYQ 886
Score = 22.2 bits (45), Expect = 4.7
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 514 AWVWQFWLL 540
AW+W WLL
Sbjct: 451 AWIWLVWLL 459
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = -1
Query: 551 GCGNSSQNCQTQASSFQIEDCTEAQKDW 468
G G + C T A F DC+ W
Sbjct: 498 GNGRCDEECNTYACEFDGNDCSLGINPW 525
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 478 WASVQSSIWKLLAWVWQFWLLLPQ 549
W S +S + LAWV +PQ
Sbjct: 151 WTSRRSKVMVYLAWVASLAFCIPQ 174
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.6
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 514 AWVWQFWLL 540
AW+W WLL
Sbjct: 464 AWIWLLWLL 472
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.6
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 514 AWVWQFWLL 540
AW+W WLL
Sbjct: 464 AWIWLLWLL 472
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.6
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 514 AWVWQFWLL 540
AW+W WLL
Sbjct: 464 AWIWLLWLL 472
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.6
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 514 AWVWQFWLL 540
AW+W WLL
Sbjct: 464 AWIWLLWLL 472
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 4.7
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 514 AWVWQFWLL 540
AW+W WLL
Sbjct: 218 AWIWLVWLL 226
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.4 bits (43), Expect = 8.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 167 VLVCTCVNNKDQGVVIFNLLHCCFRREREFNDVVGI 274
++VC V D+ V I+ L++ C + ND I
Sbjct: 288 MIVCPIVWLMDEVVEIYLLVYACASTCEQANDTPSI 323
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 21.4 bits (43), Expect = 8.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 167 VLVCTCVNNKDQGVVIFNLLHCCFRREREFNDVVGI 274
++VC V D+ V I+ L++ C + ND I
Sbjct: 288 MIVCPIVWLMDEVVEIYLLVYACASTCEQANDTPSI 323
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,471
Number of Sequences: 336
Number of extensions: 2695
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -