Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_G02
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   7.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   7.9  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/43 (23%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +1

Query: 364 KKSDSNF---VRFFTS*PGTLVILAAGVPGLGKNWLMNNEGNL 483
           +++D N    V+++ S       +  G+P  G+ W M++E ++
Sbjct: 270 RRNDENIDAQVKYWMSNGAPSAKIVLGLPTFGRAWAMDDESDI 312


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
 Frame = -1

Query: 667  SRPVTRYCPT*RGNTREPTSNTWSTISGK-KSPASR*PQTSSAASPLRP 524
            +R  T   PT    T  PT+  W T       PA   P+    + P  P
Sbjct: 1057 TRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVDKPSQPCEP 1105


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 278 VGHNEFYEQVLIPKEEKYMGKLVTVKITSAS 186
           +G +E +  + IPK  K  GKL+ + + + S
Sbjct: 74  LGRHENFS-LFIPKHRKVAGKLIRIFLAAES 103


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 675 DVEKLVXPGVPH 710
           D+E+++ PGV H
Sbjct: 59  DIERVIMPGVTH 70


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +1

Query: 424 LAAGVPGLGKNWLMNNEGNL 483
           L  G+P  G+ W M+ + ++
Sbjct: 285 LILGIPAYGRAWKMDEDSSI 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,367
Number of Sequences: 336
Number of extensions: 3222
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)