Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_F22
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 159 2e-39
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 136 2e-32
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 136 2e-32
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 103 2e-22
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 90 2e-18
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 79 5e-15
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 76 4e-14
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 76 4e-14
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 62 6e-10
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 42 7e-04
U80847-2|AAB37982.2| 475|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81563-3|CAB04565.1| 222|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z66496-6|CAA91281.3| 191|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z48585-12|CAI46589.1| 191|Caenorhabditis elegans Hypothetical p... 29 4.0
U80023-10|AAG24042.1| 97|Caenorhabditis elegans Hypothetical p... 28 7.0
U50307-4|AAA92305.1| 413|Caenorhabditis elegans Hypothetical pr... 28 9.2
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 159 bits (387), Expect = 2e-39
Identities = 73/84 (86%), Positives = 78/84 (92%)
Frame = -3
Query: 813 DRXRIGEAREELMRMLSEDXXRDAVLLIFANXQDLPXAMXAAEITDKLGLHSLRNRNWYI 634
DR R+GEAREELMRML+ED RDAVLL+FAN QDLP AM AAE+TDKLGLHSLRNR+WYI
Sbjct: 96 DRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYI 155
Query: 633 QATCATSGDGLYEGLDWLSNQLKN 562
QATCATSGDGLYEGLDWLSNQLKN
Sbjct: 156 QATCATSGDGLYEGLDWLSNQLKN 179
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 136 bits (328), Expect = 2e-32
Identities = 62/82 (75%), Positives = 70/82 (85%)
Frame = -3
Query: 813 DRXRIGEAREELMRMLSEDXXRDAVLLIFANXQDLPXAMXAAEITDKLGLHSLRNRNWYI 634
D+ RI E+REEL +ML+ED RDA LL+FAN QDLP AM AAE+TDKLGLH+LR+R WYI
Sbjct: 96 DKERIEESREELHKMLNEDELRDATLLVFANKQDLPNAMTAAELTDKLGLHNLRSRQWYI 155
Query: 633 QATCATSGDGLYEGLDWLSNQL 568
QATCAT G GLYEGLDWLSNQL
Sbjct: 156 QATCATQGHGLYEGLDWLSNQL 177
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 136 bits (328), Expect = 2e-32
Identities = 62/82 (75%), Positives = 70/82 (85%)
Frame = -3
Query: 813 DRXRIGEAREELMRMLSEDXXRDAVLLIFANXQDLPXAMXAAEITDKLGLHSLRNRNWYI 634
D+ RI E+REEL +ML+ED RDA LL+FAN QDLP AM AAE+TDKLGLH+LR+R WYI
Sbjct: 96 DKERIEESREELHKMLNEDELRDATLLVFANKQDLPNAMTAAELTDKLGLHNLRSRQWYI 155
Query: 633 QATCATSGDGLYEGLDWLSNQL 568
QATCAT G GLYEGLDWLSNQL
Sbjct: 156 QATCATQGHGLYEGLDWLSNQL 177
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 103 bits (247), Expect = 2e-22
Identities = 45/83 (54%), Positives = 62/83 (74%)
Frame = -3
Query: 813 DRXRIGEAREELMRMLSEDXXRDAVLLIFANXQDLPXAMXAAEITDKLGLHSLRNRNWYI 634
DR R+ EAR EL R++++ ++A++L+FAN QDL AM EI DKLGL +R+RNWY+
Sbjct: 92 DRDRVDEARMELHRIINDREMKEAIILVFANKQDLADAMKPHEIQDKLGLTRIRDRNWYV 151
Query: 633 QATCATSGDGLYEGLDWLSNQLK 565
Q +CA++GDGL+EGL WLS K
Sbjct: 152 QPSCASTGDGLHEGLTWLSQNCK 174
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 89.8 bits (213), Expect = 2e-18
Identities = 44/83 (53%), Positives = 55/83 (66%)
Frame = -3
Query: 813 DRXRIGEAREELMRMLSEDXXRDAVLLIFANXQDLPXAMXAAEITDKLGLHSLRNRNWYI 634
D RI EA+EEL +L+E D+ LL+FAN QD+P A AE+T L L SL+NR W+I
Sbjct: 96 DIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSLKNREWFI 155
Query: 633 QATCATSGDGLYEGLDWLSNQLK 565
T A SG GLYEGL W+ Q+K
Sbjct: 156 CGTNAHSGQGLYEGLMWVKKQMK 178
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 78.6 bits (185), Expect = 5e-15
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = -3
Query: 813 DRXRIGEAREELMRMLSEDXXRDAVLLIFANXQDLPXAMXAAEITDKLGLHSLRNRNWYI 634
DR R+G +R+EL ML ED + AVL + AN QD+ + E+ LGL +LRNR I
Sbjct: 95 DRDRVGISRQELATMLQEDELQGAVLAVLANKQDIAGCLTETEVYKALGLDALRNRTIQI 154
Query: 633 QATCATSGDGLYEGLDWLSNQLK 565
T A+ G+GL +DWL+NQL+
Sbjct: 155 FKTSASKGEGLDPAMDWLANQLQ 177
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 75.8 bits (178), Expect = 4e-14
Identities = 37/87 (42%), Positives = 53/87 (60%)
Frame = -3
Query: 813 DRXRIGEAREELMRMLSEDXXRDAVLLIFANXQDLPXAMXAAEITDKLGLHSLRNRNWYI 634
D+ R E EL +L E+ R +LIFAN QDL A + EIT KL L LR+R W+I
Sbjct: 97 DKKRFDEMNIELGELLDEEKLRKVPVLIFANKQDLVTAASSEEITRKLNLDLLRDRTWHI 156
Query: 633 QATCATSGDGLYEGLDWLSNQLKNANR 553
QA A +G+ +G+ W+++ LK A++
Sbjct: 157 QACSALKNEGINDGITWVASNLKPASK 183
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 75.8 bits (178), Expect = 4e-14
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = -3
Query: 813 DRXRIGEAREELMRMLSEDXXRDAVLLIFANXQDLPXAMXAAEITDKLGLHSLRN-RNWY 637
D RI +E+L ML + A +L+ AN QDLP AM AE++ +LGL +LR R W
Sbjct: 96 DTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMNPAEVSTQLGLQTLRGARKWQ 155
Query: 636 IQATCATSGDGLYEGLDWLSNQL 568
I CA G+GL E L+W++N L
Sbjct: 156 INGCCAVKGEGLPEALEWIANNL 178
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = -3
Query: 813 DRXRIGEAREELMRMLSEDXXRDAVLLIFANXQDLPXAMXAAEITDKLGLHSLRNRNWYI 634
DR R+ + EEL ++L E+ A LL+ AN DLP A+ I L LHS+++ +W I
Sbjct: 95 DRERLLQCSEELKKLLGEERLAGASLLVLANKSDLPGAIDVNSIAQVLDLHSIKSHHWKI 154
Query: 633 QATCATSGDGLYEGLDWLSNQL 568
+ CA SGD L + + WL + +
Sbjct: 155 FSCCALSGDRLVQAMTWLCDDV 176
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 61.7 bits (143), Expect = 6e-10
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = -3
Query: 813 DRXRIGEAREELMRMLSEDXX--RDAVLLIFANXQDLPXAMXAAEITDKLGLHSLRNRNW 640
DR R+ ++ELM ++ R ++I AN D+P AM A++IT LGL+ R+ W
Sbjct: 98 DRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPGAMTASDITVALGLNLYRSGTW 157
Query: 639 YIQATCATSGDGLYEGLDWLSNQL 568
I +TCA +GDGL + + LS ++
Sbjct: 158 SIHSTCALTGDGLDKAMQQLSAEI 181
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/83 (24%), Positives = 41/83 (49%)
Frame = -3
Query: 813 DRXRIGEAREELMRMLSEDXXRDAVLLIFANXQDLPXAMXAAEITDKLGLHSLRNRNWYI 634
D ++ +R ELM++L + +L+ N +DLP A+ ++ +++ L S++NR
Sbjct: 100 DEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDLPGALDERQLIERMNLSSIQNREICC 159
Query: 633 QATCATSGDGLYEGLDWLSNQLK 565
+ + + L WL + K
Sbjct: 160 YSISCKEKENIDITLQWLIDHSK 182
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/83 (24%), Positives = 41/83 (49%)
Frame = -3
Query: 813 DRXRIGEAREELMRMLSEDXXRDAVLLIFANXQDLPXAMXAAEITDKLGLHSLRNRNWYI 634
D ++ +R ELM++L + +L+ N +DLP A+ ++ +++ L S++NR
Sbjct: 100 DEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDLPGALDERQLIERMNLSSIQNREICC 159
Query: 633 QATCATSGDGLYEGLDWLSNQLK 565
+ + + L WL + K
Sbjct: 160 YSISCKEKENIDITLQWLIDHSK 182
>U80847-2|AAB37982.2| 475|Caenorhabditis elegans Hypothetical
protein C17H11.1 protein.
Length = 475
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 381 MQYGTLCALKYCFSKYYINYVYLNAINGMQINSVQCLYLVAL 256
+ Y + K F YY Y+ ING I+ + C +L+ L
Sbjct: 104 IHYCLVSTTKMAFVMYYTTYIEAPFINGFLISGLYCSFLLTL 145
>Z81563-3|CAB04565.1| 222|Caenorhabditis elegans Hypothetical
protein K04H8.3 protein.
Length = 222
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -1
Query: 518 IIERDYGLRYVNFIC---Y*IQCIMCGIINVLLT-RHLVTEGAPHSFRT 384
I E+ LRY NFIC + + C + + + +T R++ G P +F T
Sbjct: 105 ITEQQLNLRYYNFICSSHFHLDCKLTETLQICMTDRYVAVLGLPLAFDT 153
>Z66496-6|CAA91281.3| 191|Caenorhabditis elegans Hypothetical
protein E04D5.4 protein.
Length = 191
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 665 CIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANS 531
C CA T T+ A P TDCT+ + + TP + CA +
Sbjct: 91 CGFCAEETTTASTCADDPNTDCTQYTFLCSNAKYTPLLQQFCAKT 135
>Z48585-12|CAI46589.1| 191|Caenorhabditis elegans Hypothetical
protein E04D5.4 protein.
Length = 191
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 665 CIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANS 531
C CA T T+ A P TDCT+ + + TP + CA +
Sbjct: 91 CGFCAEETTTASTCADDPNTDCTQYTFLCSNAKYTPLLQQFCAKT 135
>U80023-10|AAG24042.1| 97|Caenorhabditis elegans Hypothetical
protein F07C4.11 protein.
Length = 97
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/58 (25%), Positives = 21/58 (36%)
Frame = -1
Query: 665 CIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQTNLIIERDYGLR 492
C RC + T S A + + CT + S S N C N L + + R
Sbjct: 35 CARCPSTTAASALAAAVAASSCTTYAADSSPSCAAWAKNGFCTNMSYTLAQRKSFCAR 92
>U50307-4|AAA92305.1| 413|Caenorhabditis elegans Hypothetical
protein F43H9.3 protein.
Length = 413
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 93 MCDHTGEMLHLFLPPLSDKIK-KKTKL*VIPQLYILYFVQRHRGSNTRRMIISWTLTPLS 269
+CDH +L L+L + DK++ + +K ++ ++L V S + + W + P+
Sbjct: 206 LCDHRFTLLFLWLRAICDKLEVRNSKYGLLSSYHLLLLVVHFLQS--EQALSPWPVLPVL 263
Query: 270 TSIAPN 287
PN
Sbjct: 264 AKTHPN 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,519,104
Number of Sequences: 27780
Number of extensions: 390777
Number of successful extensions: 963
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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