Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_F20
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 42 4e-04
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 42 4e-04
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 42 4e-04
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 31 0.87
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 31 0.87
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 31 0.87
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 31 0.87
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 31 1.2
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 31 1.2
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z48621-4|CAA88542.1| 160|Caenorhabditis elegans Hypothetical pr... 30 2.0
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 28 8.1
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 747 PEAIKXSLSRDGVLTVEAPLPQLAI 673
PE I +LS DGVLTVEAPLPQLAI
Sbjct: 82 PEQISSTLSTDGVLTVEAPLPQLAI 106
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 747 PEAIKXSLSRDGVLTVEAPLPQLAI 673
PE I +LS DGVLTVEAPLPQLAI
Sbjct: 179 PEQISSTLSTDGVLTVEAPLPQLAI 203
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -3
Query: 747 PEAIKXSLSRDGVLTVEAPLPQLAI 673
PE I +LS DGVLTVEAPLPQLAI
Sbjct: 193 PEQISSTLSTDGVLTVEAPLPQLAI 217
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -3
Query: 741 AIKXSLSRDGVLTVEAPLPQLAITDRXIPIQK 646
A+ +LS DG L++EAP + AI R IPIQ+
Sbjct: 106 AVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 136
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -3
Query: 741 AIKXSLSRDGVLTVEAPLPQLAITDRXIPIQK 646
A+ +LS DG L++EAP + AI R IPIQ+
Sbjct: 106 AVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 136
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -3
Query: 741 AIKXSLSRDGVLTVEAPLPQLAITDRXIPIQK 646
A+ +LS DG L++EAP + AI R IPIQ+
Sbjct: 106 AVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 136
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -3
Query: 741 AIKXSLSRDGVLTVEAPLPQLAITDRXIPIQK 646
A+ +LS DG L++EAP + AI R IPIQ+
Sbjct: 107 AVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 137
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -3
Query: 741 AIKXSLSRDGVLTVEAPLPQLAITDRXIPIQK 646
A+ +LS DG L++EAP + A+ R IPIQ+
Sbjct: 106 AVASNLSEDGKLSIEAPKKE-AVQGRSIPIQQ 136
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -3
Query: 741 AIKXSLSRDGVLTVEAPLPQLAITDRXIPIQK 646
A+ +LS DG L++EAP + A+ R IPIQ+
Sbjct: 106 AVASNLSEDGKLSIEAPKKE-AVQGRSIPIQQ 136
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 340 QIIIPTSNSTSTVKANVTKATLTRRPCPTT 429
Q IPT+ TST T T+T P PTT
Sbjct: 86 QTTIPTTTPTSTQTTTPTTTTITTTPVPTT 115
>Z48621-4|CAA88542.1| 160|Caenorhabditis elegans Hypothetical
protein R07B1.5 protein.
Length = 160
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +1
Query: 349 IPTSNSTSTVKANVTKATLTRRPCPTTQIGI 441
I TS ST+TV T T C T QIGI
Sbjct: 41 IATSTSTTTVTTTTTVVTAACATCTTAQIGI 71
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 355 TSNSTSTVKANVTKATLTRRPCPTT 429
TS STST T T T P PTT
Sbjct: 625 TSTSTSTTTTTTTSTTATTTPQPTT 649
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 355 TSNSTSTVKANVTKATLTRRPCPTT 429
TS STST T T T P PTT
Sbjct: 625 TSTSTSTTTTTTTSTTATTTPQPTT 649
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,706,925
Number of Sequences: 27780
Number of extensions: 270168
Number of successful extensions: 541
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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