Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_F16
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   7.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.9  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 133 PNIDSYISPFRITLKT 86
           PN DS + P  I+LKT
Sbjct: 361 PNGDSRLPPLEISLKT 376


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 133 PNIDSYISPFRITLKT 86
           PN DS + P  I+LKT
Sbjct: 361 PNGDSRLPPLEISLKT 376


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 335 LITQEKNAPDQNVICVHCSAGVGRTGTFIVLDILLDK 225
           + T   NA    V+ +H  A +   G+F   D  +DK
Sbjct: 103 IYTTHVNASFDVVVYIHSGAFMTGYGSFYQPDYFIDK 139


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 500 SHYEDYLIRELDVCDENKC 444
           S+Y   L ++   C++NKC
Sbjct: 475 SYYAKDLEKQRQQCNQNKC 493


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,219
Number of Sequences: 336
Number of extensions: 3354
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)