Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_F16
(573 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyce... 88 7e-19
SPAC11E3.09 |pyp3||protein-tyrosine phosphatase Pyp3|Schizosacch... 62 4e-11
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 56 4e-09
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 31 0.12
SPBC609.02 |ptn1||phosphatidylinositol-3,4,5-trisphosphate3-phos... 28 0.84
SPBC17A3.03c |||phosphoprotein phosphatase |Schizosaccharomyces ... 26 4.5
SPAC23H3.02c |ini1||RING finger-like protein Ini1|Schizosaccharo... 26 4.5
SPAC1B3.01c |||uracil phosphoribosyltransferase |Schizosaccharom... 25 6.0
>SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 88.2 bits (209), Expect = 7e-19
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 12/165 (7%)
Frame = -2
Query: 572 CXRYWPLSG--QEERYDNLLVRSISESHYED--YLIRELDVCDEN-KCCRAVYQYQFTAW 408
C YWP +G ++ Y + V+ ISE + ++ +++R+ ++ + N + V+ YQ+ W
Sbjct: 379 CTAYWPSNGIGDKQVYGDYCVKQISEENVDNSRFILRKFEIQNANFPSVKKVHHYQYPNW 438
Query: 407 PDHSTPPEPDRIISFMEDINRRMFLITQEKNAPDQNVICVHCSAGVGRTGTFIVLDILL- 231
D ++P ++ F++ +N N+ VHCSAGVGRTGTFIVLD +L
Sbjct: 439 SDCNSPENVKSMVEFLKYVN----------NSHGSGNTIVHCSAGVGRTGTFIVLDTILR 488
Query: 230 -DKIKSSGFNCDID-----VHNTVKLVRAQRSGMVQNKTQYRFIY 114
+ K SGFN + V V +R QR MVQ TQ++++Y
Sbjct: 489 FPESKLSGFNPSVADSSDVVFQLVDHIRKQRMKMVQTFTQFKYVY 533
>SPAC11E3.09 |pyp3||protein-tyrosine phosphatase
Pyp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 303
Score = 62.5 bits (145), Expect = 4e-11
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Frame = -2
Query: 572 CXRYWPLSGQEER----YDNLLVRSISESHYEDYLIRELDVCDENKCCRAVYQYQFTAWP 405
C YWP+ E +LV+ + + + +RE ++ +++ + + + + WP
Sbjct: 134 CDIYWPVELFETLNIGDLSVILVKVYTLTSLNEVQVREFEL-NKDGVKKKILHFYYNGWP 192
Query: 404 DHSTPPEPDRIISFMEDINRRMFLITQEKNAPDQNVICVHCSAGVGRTGTFIVLDILL-- 231
D P ++S I + E AP I VHCSAG GRTGTF+ L +L
Sbjct: 193 DFGAP-HTFSLLSLTRYIKSLSYSPDFE-TAP----IIVHCSAGCGRTGTFMALFEILSQ 246
Query: 230 --DKIKSSGFNCDIDVHNTVKLVRAQRSGMVQNKTQYRFIYLALQDYIENKNIKL 72
D +S F D ++ N V +R+QR VQ+ Q F+Y Q+ ++ K L
Sbjct: 247 TDDSTSTSKFEVD-NIANIVSSLRSQRMQSVQSVDQLVFLYTVSQELLQGKEFLL 300
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 56.0 bits (129), Expect = 4e-09
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Frame = -2
Query: 311 PDQNVICVHCSAGVGRTGTFIVLDILLD-----KIKSSGFNCDID-VHNTVKLVRAQRSG 150
P+ + VHCSAGVGRTGTFI +D +L K++ D + N V +R+QR
Sbjct: 621 PNDGPMFVHCSAGVGRTGTFIAVDQILQVPKNILPKTTNLEDSKDFIFNCVNSLRSQRMK 680
Query: 149 MVQNKTQYRFIYLALQDYIEN 87
MVQN Q++F+Y + DY+ +
Sbjct: 681 MVQNFEQFKFLY-DVVDYLNS 700
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 31.1 bits (67), Expect = 0.12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 308 DQNVICVHCSAGVGRTGTFI 249
+ VI VHC AG+GRTG I
Sbjct: 278 EDGVIAVHCKAGLGRTGCLI 297
>SPBC609.02 |ptn1||phosphatidylinositol-3,4,
5-trisphosphate3-phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 348
Score = 28.3 bits (60), Expect = 0.84
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 296 ICVHCSAGVGRTGTFI 249
+ VHC AG GRTGT I
Sbjct: 125 LVVHCKAGKGRTGTVI 140
>SPBC17A3.03c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 263
Score = 25.8 bits (54), Expect = 4.5
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -2
Query: 398 STPPEPDRIISFMEDINRRMF-LITQEKNAPDQNVICVHCSAGVGRTGTFI 249
S+ PD IS ++D+ R+ L+ ++N P + +HCS G RTG I
Sbjct: 132 SSSSNPD--ISDVDDLVRKTLQLLLNKENWP----VLLHCSRGKHRTGIVI 176
>SPAC23H3.02c |ini1||RING finger-like protein
Ini1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 25.8 bits (54), Expect = 4.5
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 35 SRDRCP-AGSPSVSI*YFCFQC 97
S+DRC G+P VS Y+C +C
Sbjct: 54 SQDRCIICGAPGVSDCYYCSEC 75
>SPAC1B3.01c |||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 219
Score = 25.4 bits (53), Expect = 6.0
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -2
Query: 449 KCCRAVYQYQFTAWPDHSTPPEPDRIISFMEDINRRMFLITQEKNAPDQNVIC 291
+CCR+V + D T I EDI++R L+ A + IC
Sbjct: 97 ECCRSVRIGKILIQRDEETHKPVLHYIKLPEDISKRYVLLLDPMLATGGSAIC 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,466,912
Number of Sequences: 5004
Number of extensions: 53363
Number of successful extensions: 118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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