Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_F15
(823 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0227 + 16601538-16601908,16603197-16603378,16603495-166035... 33 0.36
11_01_0352 + 2641949-2642974 31 1.1
04_03_0501 + 16593710-16593886,16595255-16595311,16595748-165974... 31 1.1
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 31 1.1
01_05_0809 - 25422832-25422919,25423887-25424443 31 1.5
08_02_1210 + 25314569-25314596,25315271-25315455,25315539-253156... 30 1.9
09_06_0210 - 21597470-21598093 30 2.6
03_02_0801 + 11343227-11343885,11344018-11344087,11344362-113444... 30 2.6
08_02_0476 - 17614134-17614248,17615307-17615509 29 3.4
06_01_0424 + 3041296-3041860,3042701-3042786,3042858-3043147,304... 29 3.4
09_06_0234 - 21747724-21747839,21748027-21748096,21749157-217492... 29 4.5
10_01_0274 - 2901033-2901778,2902475-2902634 29 5.9
01_06_0507 - 29893563-29894470,29895227-29895419 29 5.9
01_06_0224 - 27672201-27672336,27672439-27672507,27672948-276730... 29 5.9
07_01_1113 - 10292781-10293299 28 7.8
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 28 7.8
05_07_0195 - 28331445-28331641,28331841-28331934,28332019-283320... 28 7.8
03_05_0147 - 21268081-21268596 28 7.8
03_04_0155 - 17773121-17773576,17773744-17774322 28 7.8
02_03_0109 - 15333228-15334793,15335255-15335392,15335496-153357... 28 7.8
01_05_0131 + 18440524-18440718,18440802-18441080 28 7.8
>02_03_0227 +
16601538-16601908,16603197-16603378,16603495-16603577,
16604609-16604717,16606754-16606806,16606988-16607023
Length = 277
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/54 (40%), Positives = 23/54 (42%)
Frame = -3
Query: 236 GEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSG 75
G V RG G PA E RGA R EA R +R G G G AG G
Sbjct: 2 GAPAVEARRGTVKMGAPAVEARRGAAKRWEARRR--RGRRGDGGAGGGGAAGRG 53
>11_01_0352 + 2641949-2642974
Length = 341
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 88 SPGPE*WPWSRCSLSSRPCASGRDG 162
SP P WPW C R +S RDG
Sbjct: 34 SPSPPPWPWPSCGNRPRTVSSRRDG 58
>04_03_0501 + 16593710-16593886,16595255-16595311,16595748-16597469,
16599045-16599326,16599521-16599637,16599655-16600365
Length = 1021
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/101 (21%), Positives = 47/101 (46%)
Frame = -3
Query: 356 KALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEAASGLPARE 177
K +++ +E K + + E +A++E ++EA + +A +A AR+
Sbjct: 847 KRIQEQLEEHKRQLMIQEEMEAQKRAQEEE---EMEAQKRTQAEEEKEAAKAEE--EARK 901
Query: 176 VERGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSGPLHRGPG 54
++R A +++ +Q D + + G+ GP+ GPG
Sbjct: 902 MDRAADEEAAGSKQVNEDQMDVDNSNADGDEFVGPIPPGPG 942
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 40 PG-QGKPGPRCNGPEPASPGPE*WPWSRCSLSSRPCASGRDGA 165
PG + KP P GP+P PGP PW PC G DG+
Sbjct: 203 PGPKPKPKPPKPGPKP-KPGPP-QPWWPIPFPKPPCPPGADGS 243
>01_05_0809 - 25422832-25422919,25423887-25424443
Length = 214
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 206 EAASGLPAREVERGAPSRPEAHGRLDSEQRD-QGHHSGPGEAGSGPLHR 63
E G P R RGAP RP S+QRD + HH G G P +R
Sbjct: 59 ERHRGQPGRCASRGAPWRP------SSQQRDGRRHHRHHGGVGGSPRYR 101
>08_02_1210 +
25314569-25314596,25315271-25315455,25315539-25315648,
25315756-25315909,25316213-25316237,25316566-25316756,
25316837-25316899,25317012-25317075,25318078-25318109
Length = 283
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = -3
Query: 434 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQ 255
P L + +D+E+ E + G + K DAI EK +EL I K+ VL
Sbjct: 37 PNLHSNVDREIRQIEQQAYTGVLRAFKVQSDAITWEKESLITELRKELQISDKEHRVL-- 94
Query: 254 LEAAXQGEAHVRLLRGEAASG 192
L+ + EA R+ + G
Sbjct: 95 LKGVTEEEAVCRIRQSRQTGG 115
>09_06_0210 - 21597470-21598093
Length = 207
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 25 RFRSLPGQGKPGPRCNGPEPASPGPE*WP-WSRCSLSSRPCASGR 156
R + PG+ P P+PASP P+ P W + P GR
Sbjct: 11 RLGAAPGKAAAAPAVPRPDPASPQPDPTPGWPGSLWPASPATGGR 55
>03_02_0801 +
11343227-11343885,11344018-11344087,11344362-11344433,
11344511-11344980,11345626-11346598
Length = 747
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 407 PCPTKRPTLVRISRELHTP*PTVTVRSNIRAPLH 508
PCPT VR+S + P PTV V S + AP H
Sbjct: 146 PCPT-----VRVSSAVGAPCPTVRVSSAVGAPCH 174
>08_02_0476 - 17614134-17614248,17615307-17615509
Length = 105
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 167 GAPSRPEAH-GRLDSEQRDQGHHSGPGEAGSGP 72
G P+R E G D E+R SG EAGSGP
Sbjct: 24 GTPARQELRLGAGDEEKRPAAARSGAVEAGSGP 56
>06_01_0424 +
3041296-3041860,3042701-3042786,3042858-3043147,
3043225-3043285,3043773-3043868,3044448-3044603,
3044811-3044987
Length = 476
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -3
Query: 410 KEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAXQGE 231
+E+E + NEG N+ K ++ EK + + E L A + N L+ E + E
Sbjct: 337 REIECLHKQLNEGENKASKERSRRMKSEKLVKTLSSQVEQLRSANERNANLERELSECRE 396
Query: 230 AHVRL 216
RL
Sbjct: 397 RFERL 401
>09_06_0234 -
21747724-21747839,21748027-21748096,21749157-21749294,
21749389-21749493,21750157-21750527,21750612-21750694,
21750803-21751063,21751425-21751606,21752539-21752649,
21752727-21752798,21752883-21753036,21753329-21753341,
21754015-21754084,21754409-21754485,21754582-21754640,
21755327-21755580
Length = 711
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 194 GLPAREVERGAPSRPEAHGRLDSEQRDQGH 105
G+ + EV+ GA +RPEAH S GH
Sbjct: 493 GVKSPEVQCGADTRPEAHSGSSSTSAASGH 522
>10_01_0274 - 2901033-2901778,2902475-2902634
Length = 301
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 40 PGQGKPGPRCNGPEPASPGPE 102
PG G+P P C P P +P PE
Sbjct: 210 PGYGQPAPEC--PPPPTPAPE 228
>01_06_0507 - 29893563-29894470,29895227-29895419
Length = 366
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 49 GKPGPRCNGPEPASPGPE*WPWSRCSLSSRPCASGRDGAPRS 174
GKP P C G E +P P P C+ S +P +G A S
Sbjct: 18 GKPQPICLGAEEKAPSP---PSFHCAHSRQPAQAGARRADAS 56
>01_06_0224 -
27672201-27672336,27672439-27672507,27672948-27673040,
27673245-27673336,27673491-27673577,27673734-27673832,
27673927-27674026,27674113-27674171,27674361-27674720
Length = 364
Score = 28.7 bits (61), Expect = 5.9
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = -3
Query: 260 LQLEAAXQGEA-HVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGHHSG--PG 90
+ L A G A VR R AASG A P+ + +++ Q +G PG
Sbjct: 1 MSLPALAAGRAASVRPPRASAASGEAAAAAAADQPAGRRPVKVILPKKKPQKWSTGMAPG 60
Query: 89 EAGSGPLHRGPGLPWPGSE 33
E G GP P W G E
Sbjct: 61 EYGGGPATPKPRKYWMGKE 79
>07_01_1113 - 10292781-10293299
Length = 172
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -3
Query: 695 SASDVATHDQKTFARPVRGEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLA 534
S+ D AT + PG +RL + + + H + GP+ G+GL+
Sbjct: 91 SSVDAATKGNPPRSARTTSAPGSLRLPEVAQRVVELLHHRHWWFGPWALGLGLS 144
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Frame = -3
Query: 212 RGEAASGLPAREVERGAPSRPEA-HGRLDS----EQRDQGHHSGPGEAGSGPLHRGPGLP 48
R + S P R ERG RP H R S ++RD + G G GP HR P
Sbjct: 476 RSRSRSRSPLRYRERGGYRRPSPRHSRSRSPAEHQRRDVRNRLRSGRDGGGPDHRNSSPP 535
>05_07_0195 -
28331445-28331641,28331841-28331934,28332019-28332099,
28332186-28332234,28332334-28332419,28332513-28332740,
28332819-28332857,28332958-28333047,28333207-28333269,
28333371-28333449,28333539-28333585,28333668-28333730,
28333814-28333864,28333977-28334060,28334162-28334226,
28334559-28334676,28334775-28334825,28335228-28335314,
28335633-28335712,28336676-28336793
Length = 589
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 546 CGSGNIPVQQGNLCNGARILLRTVTVGH 463
CG + PV++GN CNGA + GH
Sbjct: 542 CGVVSSPVRRGNYCNGATKQQKLYQNGH 569
>03_05_0147 - 21268081-21268596
Length = 171
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/67 (32%), Positives = 27/67 (40%)
Frame = -3
Query: 227 HVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSGPLHRGPGLP 48
H R+ RG AA G V A R A G G G +G PL G G+P
Sbjct: 49 HGRIWRGSAARGGARLGVATVARRRNAAGGSGGGPVAGSSTWQGGGGSGGAPL--GSGVP 106
Query: 47 WPGSERK 27
GS+ +
Sbjct: 107 AAGSDSR 113
>03_04_0155 - 17773121-17773576,17773744-17774322
Length = 344
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = -3
Query: 251 EAAXQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSGP 72
EAA +G A + +G G E +R HGR +R H SG G +G+G
Sbjct: 45 EAARRGGAAAAVRQGGRVLGRSGGEEDRLL-----LHGRRTKGRR---HRSGKGRSGAGV 96
Query: 71 LHRGPGLPWPGS 36
G G W G+
Sbjct: 97 GLAGVGWGWAGT 108
>02_03_0109 -
15333228-15334793,15335255-15335392,15335496-15335771,
15336357-15336422,15338140-15338487
Length = 797
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 743 SGASKQTACTALVARGSASDVATHDQKTFAR 651
+ A K AC ALV+RG A+D + + AR
Sbjct: 630 AAAGKLEACRALVSRGGAADAGSETALSVAR 660
>01_05_0131 + 18440524-18440718,18440802-18441080
Length = 157
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -3
Query: 209 GEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSGPLHRGPGLPWPGSER 30
G AS L R A +RP+ S + + G + PG +G + G WP +R
Sbjct: 30 GGGASFLSPRRGRGAARNRPDLCRLAGSSEEEVGGGAVPGGVTAGEVRLRDGWIWPDDDR 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,743,130
Number of Sequences: 37544
Number of extensions: 511953
Number of successful extensions: 2123
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2120
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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