Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_F15
(823 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b... 111 4e-24
BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+ transp... 110 5e-24
BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+ transp... 110 5e-24
AY871272-1|AAX11428.1| 256|Homo sapiens cell proliferation-indu... 110 5e-24
AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+ transp... 110 5e-24
AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+ transp... 110 5e-24
BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+ transp... 107 4e-23
AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+ transp... 73 2e-12
U04270-1|AAA62473.1| 1159|Homo sapiens putative potassium channe... 34 0.54
DQ784808-1|ABQ01243.1| 1159|Homo sapiens potassium voltage-gated... 34 0.54
DQ525913-1|ABF71886.1| 1159|Homo sapiens voltage-gated potassium... 34 0.54
BC004311-1|AAH04311.2| 444|Homo sapiens KCNH2 protein protein. 34 0.54
AK097414-1|BAC05041.1| 455|Homo sapiens protein ( Homo sapiens ... 34 0.54
AJ512214-1|CAD54447.1| 819|Homo sapiens potassium channel 1b pr... 34 0.54
AJ010538-1|CAA09232.1| 1133|Homo sapiens ether-a-go-go-related p... 34 0.54
AF363636-1|AAL37559.1| 1159|Homo sapiens ether-a-go-go-related K... 34 0.54
AB009071-1|BAA37096.1| 1159|Homo sapiens HERG protein. 34 0.54
AL049712-6|CAI22420.2| 906|Homo sapiens transmembrane channel-l... 34 0.71
AF417580-1|AAL86401.2| 906|Homo sapiens transmembrane channel-l... 34 0.71
BC119788-1|AAI19789.1| 626|Homo sapiens APOB48R protein protein. 33 1.6
BC119786-1|AAI19787.1| 1088|Homo sapiens apolipoprotein B48 rece... 33 1.6
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 33 1.6
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 33 1.6
AF141334-1|AAF78765.1| 1076|Homo sapiens placenta apolipoprotein... 33 1.6
AF141333-1|AAF76256.1| 1088|Homo sapiens apolipoprotein B48 rece... 33 1.6
AF141332-1|AAF76255.1| 1088|Homo sapiens apolipoprotein B48 rece... 33 1.6
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 33 1.6
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc... 33 1.6
X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 ... 32 2.9
BC092492-1|AAH92492.1| 405|Homo sapiens PHC2 protein protein. 32 2.9
BC068573-1|AAH68573.1| 405|Homo sapiens PHC2 protein protein. 32 2.9
AK091779-1|BAC03745.1| 204|Homo sapiens protein ( Homo sapiens ... 28 3.2
Z98949-1|CAI17892.1| 2566|Homo sapiens protein ( Human DNA seque... 31 3.8
M95610-1|AAA80977.1| 675|Homo sapiens alpha-2 IX collagen protein. 31 3.8
AY077700-1|AAL75811.1| 2568|Homo sapiens myosin-like protein pro... 31 3.8
AL080245-1|CAI16965.1| 2566|Homo sapiens protein ( Human DNA seq... 31 3.8
AL079300-1|CAI17881.1| 2566|Homo sapiens protein ( Human DNA seq... 31 3.8
AL050341-6|CAB81611.1| 689|Homo sapiens collagen type IX alpha ... 31 3.8
AL022329-3|CAI17968.1| 2566|Homo sapiens protein ( Human DNA seq... 31 3.8
AJ310932-1|CAC70714.3| 2567|Homo sapiens myosin heavy chain prot... 31 3.8
AJ310931-1|CAC70712.2| 2567|Homo sapiens myosin heavy chain prot... 31 3.8
AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha ... 31 3.8
AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha ... 31 3.8
AF019406-1|AAC33512.1| 689|Homo sapiens collagen type IX alpha ... 31 3.8
AB075376-1|BAC16363.1| 2567|Homo sapiens bk125H2.1 protein. 31 3.8
BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein. 31 5.0
BC042075-1|AAH42075.1| 854|Homo sapiens COL22A1 protein protein. 31 5.0
AK097078-1|BAC04942.1| 666|Homo sapiens protein ( Homo sapiens ... 31 6.7
AK090421-1|BAC03402.1| 246|Homo sapiens FLJ00330 protein protein. 31 6.7
AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII colla... 31 6.7
M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein. 30 8.8
M60832-1|AAA62822.1| 635|Homo sapiens alpha-2 type VIII collage... 30 8.8
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 30 8.8
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 30 8.8
BC103911-1|AAI03912.1| 753|Homo sapiens transcription elongatio... 30 8.8
AY358755-1|AAQ89115.1| 159|Homo sapiens GRPR5811 protein. 30 8.8
AL844853-14|CAI41862.1| 333|Homo sapiens RD RNA binding protein... 30 8.8
AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collag... 30 8.8
AB030834-1|BAA90665.1| 753|Homo sapiens transcription factor El... 30 8.8
>X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b
protein.
Length = 256
Score = 111 bits (266), Expect = 4e-24
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Frame = -3
Query: 767 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 606
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 605 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 429
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLVLYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 428 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 249
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Score = 63.7 bits (148), Expect = 8e-10
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1
Query: 229 LMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADL 56
L Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+ QEK+ + +CIADL
Sbjct: 186 LYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
>BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 110 bits (265), Expect = 5e-24
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Frame = -3
Query: 767 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 606
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 605 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 429
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 428 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 249
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Score = 63.7 bits (148), Expect = 8e-10
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1
Query: 229 LMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADL 56
L Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+ QEK+ + +CIADL
Sbjct: 186 LYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
>BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 110 bits (265), Expect = 5e-24
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Frame = -3
Query: 767 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 606
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 605 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 429
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 428 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 249
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Score = 63.7 bits (148), Expect = 8e-10
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1
Query: 229 LMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADL 56
L Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+ QEK+ + +CIADL
Sbjct: 186 LYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
>AY871272-1|AAX11428.1| 256|Homo sapiens cell
proliferation-inducing protein 47 protein.
Length = 256
Score = 110 bits (265), Expect = 5e-24
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Frame = -3
Query: 767 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 606
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 605 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 429
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 428 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 249
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Score = 63.7 bits (148), Expect = 8e-10
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1
Query: 229 LMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADL 56
L Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+ QEK+ + +CIADL
Sbjct: 186 LYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
>AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 110 bits (265), Expect = 5e-24
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Frame = -3
Query: 767 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 606
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 605 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 429
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 428 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 249
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Score = 63.7 bits (148), Expect = 8e-10
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1
Query: 229 LMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADL 56
L Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+ QEK+ + +CIADL
Sbjct: 186 LYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
>AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit b
isoform 1 pr protein.
Length = 256
Score = 110 bits (265), Expect = 5e-24
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Frame = -3
Query: 767 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 606
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 605 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 429
EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 428 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 249
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Score = 63.3 bits (147), Expect = 1e-09
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1
Query: 229 LMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADL 56
L Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+ QEK+ + +CIADL
Sbjct: 186 LYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVGKHVVQSISTQQEKETIAKCIADL 243
>BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 256
Score = 107 bits (258), Expect = 4e-23
Identities = 69/180 (38%), Positives = 99/180 (55%), Gaps = 7/180 (3%)
Frame = -3
Query: 767 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 606
MLSRV L + A+ + A + G T H + PV P GKVR G IP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 605 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 429
EE+FQF + KTGVTGPY G GL Y SK IYV+ E ++ LS+L VMVY K+GP
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKGIYVISAETFTALSVLGVMVY-GIKKYGPF 119
Query: 428 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 249
+A + DK E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 179
Score = 62.5 bits (145), Expect = 2e-09
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = -1
Query: 229 LMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADL 56
L Y EV+ RLDY + N+ RR Q+HM++W+ +V ++I+ QEK+ + +CIADL
Sbjct: 186 LYRVYKEVRNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
>AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit B1
protein.
Length = 195
Score = 72.5 bits (170), Expect = 2e-12
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = -3
Query: 581 SKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPKLAAWLDKE 405
S GPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP +A + DK
Sbjct: 8 SAAATAGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPFVADFADKL 66
Query: 404 VEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 249
E + E + +++ +++AI+ EK++Q Q + L ++ N+ + LE
Sbjct: 67 NEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALE 118
Score = 63.7 bits (148), Expect = 8e-10
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -1
Query: 229 LMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADL 56
L Y EVK RLDY + N+ RR Q+HM++W+ +V ++I+ QEK+ + +CIADL
Sbjct: 125 LYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 182
>U04270-1|AAA62473.1| 1159|Homo sapiens putative potassium channel
subunit protein.
Length = 1159
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 131 DSEQRDQGHHSGPGEAGSGPLHRG-PGLPW 45
D+EQ + GPG AG+GP RG PG PW
Sbjct: 898 DTEQPGEVSALGPGRAGAGPSSRGRPGGPW 927
>DQ784808-1|ABQ01243.1| 1159|Homo sapiens potassium voltage-gated
channel subfamily H member 2 protein.
Length = 1159
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 131 DSEQRDQGHHSGPGEAGSGPLHRG-PGLPW 45
D+EQ + GPG AG+GP RG PG PW
Sbjct: 898 DTEQPGEVSALGPGRAGAGPSSRGRPGGPW 927
>DQ525913-1|ABF71886.1| 1159|Homo sapiens voltage-gated potassium
channel KV11.1 transcript variant 1 protein.
Length = 1159
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 131 DSEQRDQGHHSGPGEAGSGPLHRG-PGLPW 45
D+EQ + GPG AG+GP RG PG PW
Sbjct: 898 DTEQPGEVSALGPGRAGAGPSSRGRPGGPW 927
>BC004311-1|AAH04311.2| 444|Homo sapiens KCNH2 protein protein.
Length = 444
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 131 DSEQRDQGHHSGPGEAGSGPLHRG-PGLPW 45
D+EQ + GPG AG+GP RG PG PW
Sbjct: 183 DTEQPGEVSALGPGRAGAGPSSRGRPGGPW 212
>AK097414-1|BAC05041.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ40095 fis, clone TESTI2003940, weakly similar to
EBNA-1 NUCLEAR PROTEIN. ).
Length = 455
Score = 34.3 bits (75), Expect = 0.54
Identities = 37/123 (30%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Frame = -3
Query: 380 NEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRGEA 201
N G N E T+Q RAQ +E ++E+V EAA GEA V +A
Sbjct: 53 NHGTNPETTTSGGCHSPEDTQQNRAQLKEEKKMREQEDVETGGEAAGAGEADVGAGGEDA 112
Query: 200 ASGLP-----AREVERGAPSRPEAHGRLDSEQRDQGHHSGPGE--AGSGPLHRGPGLPWP 42
SG +V G + E +E G GE AG+G GPG
Sbjct: 113 GSGAEDVGPGGEDVGAGREAAAEGGENAGAEDVAAGGEDAGGEEDAGAGEEDMGPGEDAR 172
Query: 41 GSE 33
G E
Sbjct: 173 GGE 175
>AJ512214-1|CAD54447.1| 819|Homo sapiens potassium channel 1b
protein protein.
Length = 819
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 131 DSEQRDQGHHSGPGEAGSGPLHRG-PGLPW 45
D+EQ + GPG AG+GP RG PG PW
Sbjct: 558 DTEQPGEVSALGPGRAGAGPSSRGRPGGPW 587
>AJ010538-1|CAA09232.1| 1133|Homo sapiens ether-a-go-go-related
protein protein.
Length = 1133
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 131 DSEQRDQGHHSGPGEAGSGPLHRG-PGLPW 45
D+EQ + GPG AG+GP RG PG PW
Sbjct: 872 DTEQPGEVSALGPGRAGAGPSSRGRPGGPW 901
>AF363636-1|AAL37559.1| 1159|Homo sapiens ether-a-go-go-related K+
channel protein protein.
Length = 1159
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 131 DSEQRDQGHHSGPGEAGSGPLHRG-PGLPW 45
D+EQ + GPG AG+GP RG PG PW
Sbjct: 898 DTEQPGEVSALGPGRAGAGPSSRGRPGGPW 927
>AB009071-1|BAA37096.1| 1159|Homo sapiens HERG protein.
Length = 1159
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 131 DSEQRDQGHHSGPGEAGSGPLHRG-PGLPW 45
D+EQ + GPG AG+GP RG PG PW
Sbjct: 898 DTEQPGEVSALGPGRAGAGPSSRGRPGGPW 927
>AL049712-6|CAI22420.2| 906|Homo sapiens transmembrane channel-like
2 protein.
Length = 906
Score = 33.9 bits (74), Expect = 0.71
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 224 VRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGHHSGPGEAGS--GPLHRGPGL 51
V+ L+ EA G+ R V+ G+P + GR S +R PG G+ R G
Sbjct: 5 VKGLKEEARGGVKGR-VKSGSPHTGDRLGRRSSSKRALKAEGTPGRRGAQRSQKERAGGS 63
Query: 50 PWPGSERKR 24
P PGS R++
Sbjct: 64 PSPGSPRRK 72
>AF417580-1|AAL86401.2| 906|Homo sapiens transmembrane channel-like
protein 2 protein.
Length = 906
Score = 33.9 bits (74), Expect = 0.71
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 224 VRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGHHSGPGEAGS--GPLHRGPGL 51
V+ L+ EA G+ R V+ G+P + GR S +R PG G+ R G
Sbjct: 5 VKGLKEEARGGVKGR-VKSGSPHTGDRLGRRSSSKRALKAEGTPGRRGAQRSQKERAGGS 63
Query: 50 PWPGSERKR 24
P PGS R++
Sbjct: 64 PSPGSPRRK 72
>BC119788-1|AAI19789.1| 626|Homo sapiens APOB48R protein protein.
Length = 626
Score = 32.7 bits (71), Expect = 1.6
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Frame = -3
Query: 638 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 459
E + G + EW HS T GP G +E E E L+L
Sbjct: 67 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 126
Query: 458 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 294
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 127 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 186
Query: 293 LLIQAK--KENVLLQL-EAAXQG 234
L +A+ +E+ L ++ EA +G
Sbjct: 187 LAAEAEGDRESELSEVPEAGGEG 209
>BC119786-1|AAI19787.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 32.7 bits (71), Expect = 1.6
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Frame = -3
Query: 638 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 459
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 458 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 294
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 293 LLIQAK--KENVLLQL-EAAXQG 234
L +A+ +E+ L ++ EA +G
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEG 671
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = -3
Query: 419 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 249
W K+ + E+E E ++T+ +L+ + + ++ AQG+ L+QA KEN+ Q+E
Sbjct: 1304 WEGKQ-NSLESELME-LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVE 1358
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 32.7 bits (71), Expect = 1.6
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = -3
Query: 308 AQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRG-EAASGLPAREVERGAPSRPEAHGRL 132
AQG L K E + + + G+ +R G + G+P +G P P+ L
Sbjct: 530 AQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTPGVKGLPG-PKGELAL 588
Query: 131 DSEQRDQGHHSGPGEAGSGPLHRGPGLPWPG 39
E+ DQG PG GS P GP P PG
Sbjct: 589 SGEKGDQGPPGDPGSPGS-PGPAGPAGP-PG 617
>AF141334-1|AAF78765.1| 1076|Homo sapiens placenta apolipoprotein
B48 receptor type 2 protein.
Length = 1076
Score = 32.7 bits (71), Expect = 1.6
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Frame = -3
Query: 638 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 459
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 458 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 294
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 293 LLIQAK--KENVLLQL-EAAXQG 234
L +A+ +E+ L ++ EA +G
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEG 671
>AF141333-1|AAF76256.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 32.7 bits (71), Expect = 1.6
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Frame = -3
Query: 638 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 459
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 458 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 294
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 293 LLIQAK--KENVLLQL-EAAXQG 234
L +A+ +E+ L ++ EA +G
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEG 671
>AF141332-1|AAF76255.1| 1088|Homo sapiens apolipoprotein B48
receptor protein.
Length = 1088
Score = 32.7 bits (71), Expect = 1.6
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Frame = -3
Query: 638 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 459
E + G + EW HS T GP G +E E E L+L
Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588
Query: 458 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGE-KTEQWRAQGQE 294
++ GP+ A + E EA W + ++ EDA +GE + E+ A GQ
Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648
Query: 293 LLIQAK--KENVLLQL-EAAXQG 234
L +A+ +E+ L ++ EA +G
Sbjct: 649 LAAEAEGDRESELSEVPEAGGEG 671
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = -3
Query: 419 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 249
W K+ + E+E E ++T+ +L+ + + ++ AQG+ L+QA KEN+ Q+E
Sbjct: 1304 WEGKQ-NSLESELME-LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVE 1358
>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome associated
protein protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = -3
Query: 419 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE 249
W K+ + E+E E ++T+ +L+ + + ++ AQG+ L+QA KEN+ Q+E
Sbjct: 1304 WEGKQ-NSLESELME-LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVE 1358
>X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3
chain protein.
Length = 1670
Score = 31.9 bits (69), Expect = 2.9
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = -3
Query: 308 AQGQELLIQAKKENVLLQLEAAXQGEAHVRLLRG-EAASGLPAREVERGAPSRPEAHGRL 132
AQG L K E + + + G+ +R G + G+P +G P P+ L
Sbjct: 530 AQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRKGLDGIPGTLGVKGLPG-PKGELAL 588
Query: 131 DSEQRDQGHHSGPGEAGSGPLHRGPGLPWPG 39
E+ DQG PG GS P GP P PG
Sbjct: 589 SGEKGDQGPPGDPGSPGS-PGPAGPAGP-PG 617
>BC092492-1|AAH92492.1| 405|Homo sapiens PHC2 protein protein.
Length = 405
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Frame = -3
Query: 188 PAREVERGAPSRPEAHGR-LDSEQRDQGHHSGPGEAGS------GPLHRGPGLPW 45
PAR V AP +P A R L +E+R P G+ GP GP PW
Sbjct: 10 PARPVRSDAPRQPRAPARRLPAERRRPARARDPARVGARPRGCVGPARPGPAGPW 64
>BC068573-1|AAH68573.1| 405|Homo sapiens PHC2 protein protein.
Length = 405
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Frame = -3
Query: 188 PAREVERGAPSRPEAHGR-LDSEQRDQGHHSGPGEAGS------GPLHRGPGLPW 45
PAR V AP +P A R L +E+R P G+ GP GP PW
Sbjct: 10 PARPVRSDAPRQPRAPARRLPAERRRPARARDPARVGARPRGCVGPARPGPAGPW 64
>AK091779-1|BAC03745.1| 204|Homo sapiens protein ( Homo sapiens
cDNA FLJ34460 fis, clone HLUNG2002942. ).
Length = 204
Score = 27.9 bits (59), Expect(2) = 3.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 366 PNRESTGGRNRGREDGAVARAGTGAPH 286
P + GGR +G+E A R G +PH
Sbjct: 60 PGQPRQGGRGKGQEASAQTRYGGNSPH 86
Score = 22.6 bits (46), Expect(2) = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 312 ARAGTGAPHPGQ 277
AR G PHPGQ
Sbjct: 105 ARRARGCPHPGQ 116
>Z98949-1|CAI17892.1| 2566|Homo sapiens protein ( Human DNA sequence
from clone CTA-125H2 on chromosome 22q11-12. ).
Length = 2566
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 82 PASPGPE*WPWSRCSLSSRPCASGRDGA 165
PA+PG WP SR + PC+ DGA
Sbjct: 429 PAAPGKGGWPGSRGQEAEEPCSRAGDGA 456
>M95610-1|AAA80977.1| 675|Homo sapiens alpha-2 IX collagen protein.
Length = 675
Score = 31.5 bits (68), Expect = 3.8
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -3
Query: 209 GEAASGLPAREVERGAPSRPEAHGR-LDSEQRDQGHHSGPGEAGSGPLHRGPGLP 48
GE G P G P P G+ ++ + D+G PGEAG L GLP
Sbjct: 593 GEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLP 647
>AY077700-1|AAL75811.1| 2568|Homo sapiens myosin-like protein
protein.
Length = 2568
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 82 PASPGPE*WPWSRCSLSSRPCASGRDGA 165
PA+PG WP SR + PC+ DGA
Sbjct: 429 PAAPGKGGWPGSRGQEAEEPCSRAGDGA 456
>AL080245-1|CAI16965.1| 2566|Homo sapiens protein ( Human DNA
sequence from clone RP11-89B2 on chromosome 22. ).
Length = 2566
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 82 PASPGPE*WPWSRCSLSSRPCASGRDGA 165
PA+PG WP SR + PC+ DGA
Sbjct: 429 PAAPGKGGWPGSRGQEAEEPCSRAGDGA 456
>AL079300-1|CAI17881.1| 2566|Homo sapiens protein ( Human DNA
sequence from clone CTA-109D1 on chromosome 22. ).
Length = 2566
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 82 PASPGPE*WPWSRCSLSSRPCASGRDGA 165
PA+PG WP SR + PC+ DGA
Sbjct: 429 PAAPGKGGWPGSRGQEAEEPCSRAGDGA 456
>AL050341-6|CAB81611.1| 689|Homo sapiens collagen type IX alpha 2
protein.
Length = 689
Score = 31.5 bits (68), Expect = 3.8
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -3
Query: 209 GEAASGLPAREVERGAPSRPEAHGR-LDSEQRDQGHHSGPGEAGSGPLHRGPGLP 48
GE G P G P P G+ ++ + D+G PGEAG L GLP
Sbjct: 607 GEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLP 661
>AL022329-3|CAI17968.1| 2566|Homo sapiens protein ( Human DNA
sequence from clone CTA-407F11 on chromosome 22q12. ).
Length = 2566
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 82 PASPGPE*WPWSRCSLSSRPCASGRDGA 165
PA+PG WP SR + PC+ DGA
Sbjct: 429 PAAPGKGGWPGSRGQEAEEPCSRAGDGA 456
>AJ310932-1|CAC70714.3| 2567|Homo sapiens myosin heavy chain
protein.
Length = 2567
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 82 PASPGPE*WPWSRCSLSSRPCASGRDGA 165
PA+PG WP SR + PC+ DGA
Sbjct: 429 PAAPGKGGWPGSRGQEAEEPCSRAGDGA 456
>AJ310931-1|CAC70712.2| 2567|Homo sapiens myosin heavy chain
protein.
Length = 2567
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 82 PASPGPE*WPWSRCSLSSRPCASGRDGA 165
PA+PG WP SR + PC+ DGA
Sbjct: 429 PAAPGKGGWPGSRGQEAEEPCSRAGDGA 456
>AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha I
chain, short form protein.
Length = 678
Score = 31.5 bits (68), Expect = 3.8
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = -3
Query: 236 GEAHVRLLRG-EAASGLPAREVERGAPSRPEAHGR--LDSEQRDQGHHSGPGEAGSGPLH 66
GEA + RG E A G+P +G P GR + +G PG G LH
Sbjct: 268 GEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLH 327
Query: 65 RGPGLPW-PGSE 33
PG+P PG++
Sbjct: 328 GLPGVPGIPGAK 339
>AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha I
chain, long form protein.
Length = 921
Score = 31.5 bits (68), Expect = 3.8
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = -3
Query: 236 GEAHVRLLRG-EAASGLPAREVERGAPSRPEAHGR--LDSEQRDQGHHSGPGEAGSGPLH 66
GEA + RG E A G+P +G P GR + +G PG G LH
Sbjct: 511 GEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLH 570
Query: 65 RGPGLPW-PGSE 33
PG+P PG++
Sbjct: 571 GLPGVPGIPGAK 582
>AF019406-1|AAC33512.1| 689|Homo sapiens collagen type IX alpha 2
chain protein.
Length = 689
Score = 31.5 bits (68), Expect = 3.8
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -3
Query: 209 GEAASGLPAREVERGAPSRPEAHGR-LDSEQRDQGHHSGPGEAGSGPLHRGPGLP 48
GE G P G P P G+ ++ + D+G PGEAG L GLP
Sbjct: 607 GEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLP 661
>AB075376-1|BAC16363.1| 2567|Homo sapiens bk125H2.1 protein.
Length = 2567
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 82 PASPGPE*WPWSRCSLSSRPCASGRDGA 165
PA+PG WP SR + PC+ DGA
Sbjct: 429 PAAPGKGGWPGSRGQEAEEPCSRAGDGA 456
>BC131805-1|AAI31806.1| 913|Homo sapiens CCDC46 protein protein.
Length = 913
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 413 DKEVEATENEWNEGRNQTVKALEDAIEGEKTE-QWRAQGQELLIQAKKENVLLQLEAAXQ 237
D ++EA N WN G + K +E EK + Q + I +K N + +L+ +
Sbjct: 201 DSDIEARLNSWNLGLDMKTKMMEAKFHEEKLKLQQKHDADVQKILERKNNEIEELKTLYR 260
Query: 236 GEAH 225
+ H
Sbjct: 261 SKQH 264
>BC042075-1|AAH42075.1| 854|Homo sapiens COL22A1 protein protein.
Length = 854
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = -3
Query: 197 SGLPAREVERGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSGPLHRGPGLPWPGSER 30
+G P E G P +P G + +QG PGE G L PG P E+
Sbjct: 15 NGEPGERGEDGLPGKPGLRGEIG----EQGLAGRPGEKGEAGLPGAPGFPGVRGEK 66
>AK097078-1|BAC04942.1| 666|Homo sapiens protein ( Homo sapiens
cDNA FLJ39759 fis, clone SMINT2019153, weakly similar to
ATP-DEPENDENT RNA HELICASE DBP73D. ).
Length = 666
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 2/79 (2%)
Frame = -3
Query: 257 QLEAAXQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGR-LDSEQRD-QGHHSGPGEA 84
Q EAA E R R + E G+P P+ R D E + + PGE
Sbjct: 53 QTEAAASTEPATRRRR-RPRRRRRVNDAEPGSPEAPQGKRRKADGEDAGAESNEEAPGEP 111
Query: 83 GSGPLHRGPGLPWPGSERK 27
+G PG P GS +
Sbjct: 112 SAGSSEEAPGEPSAGSSEE 130
>AK090421-1|BAC03402.1| 246|Homo sapiens FLJ00330 protein protein.
Length = 246
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -3
Query: 182 REVERGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSGPLHRGPGLP 48
R E AP+ P + R S +G SGPGEA L PG P
Sbjct: 11 RYPEAAAPALPTSTLRGTSSPARKGDLSGPGEAAGSRLLAAPGPP 55
>AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII collagen
protein.
Length = 1626
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = -3
Query: 194 GLPAREVERGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSGPLHRGPGLPWPGSER 30
G P E G P +P G + +QG PGE G L PG P E+
Sbjct: 768 GEPGERGEDGLPGKPGLRGEIG----EQGLAGRPGEKGEAGLPGAPGFPGVRGEK 818
>M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein.
Length = 625
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 170 RGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSGPLHRG-PGLPW-PGSE 33
RG P P + D R + GPGE G P G PGLP PG +
Sbjct: 574 RGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQ 621
>M60832-1|AAA62822.1| 635|Homo sapiens alpha-2 type VIII collagen
protein.
Length = 635
Score = 30.3 bits (65), Expect = 8.8
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = -3
Query: 194 GLPAREVERGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSGPLHRGPGLPWP 42
GLP + E G P P GR E G PG GS + PGLP P
Sbjct: 413 GLPGLKGEPGLPG-PPGEGRA-GEPGTAGPRGPPGVPGSPGITGPPGLPGP 461
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 170 RGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSGPLHRG-PGLPW-PGSE 33
RG P P + D R + GPGE G P G PGLP PG +
Sbjct: 1388 RGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQ 1435
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 170 RGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSGPLHRG-PGLPW-PGSE 33
RG P P + D R + GPGE G P G PGLP PG +
Sbjct: 1388 RGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQ 1435
>BC103911-1|AAI03912.1| 753|Homo sapiens transcription elongation
factor B polypeptide 3B (elongin A2) protein.
Length = 753
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 25 RFRSLPGQGKPGPRCNGPEPASPGPE 102
R+R+ P + P P GPEPA+PG +
Sbjct: 167 RYRASPTRTAPLPMPEGPEPAAPGKQ 192
>AY358755-1|AAQ89115.1| 159|Homo sapiens GRPR5811 protein.
Length = 159
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 40 PGQGKPGPRCNGPEPASPGP 99
PG PG RC P P+ PGP
Sbjct: 29 PGPPVPGHRCGRPRPSCPGP 48
>AL844853-14|CAI41862.1| 333|Homo sapiens RD RNA binding protein
protein.
Length = 333
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Frame = -3
Query: 209 GEAASGLPAREVERGAPSRPEAHGRLD---SEQRDQGHHSGPGEAGSGPLHRGPGLPWPG 39
G A P R + G R AH S RD+ H GP R P
Sbjct: 150 GPGAGDGPPRSFDWGYEERSGAHSSASPPRSRSRDRSHERNRDRDREGPFRRSDSFPERR 209
Query: 38 SERK-RTLFMY 9
+ RK TL++Y
Sbjct: 210 APRKGNTLYVY 220
>AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collagen
precursor variant protein.
Length = 1027
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 170 RGAPSRPEAHGRLDSEQRDQGHHSGPGEAGSGPLHRG-PGLPW-PGSE 33
RG P P + D R + GPGE G P G PGLP PG +
Sbjct: 27 RGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQ 74
>AB030834-1|BAA90665.1| 753|Homo sapiens transcription factor
Elongin A2 protein.
Length = 753
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 25 RFRSLPGQGKPGPRCNGPEPASPGPE 102
R+R+ P + P P GPEPA+PG +
Sbjct: 167 RYRASPTRTAPLPMPEGPEPAAPGKQ 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,232,945
Number of Sequences: 237096
Number of extensions: 2907132
Number of successful extensions: 14914
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 12696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14877
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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