Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_F12
         (692 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z5J9 Cluster: Putative uncharacterized protein; n=3; ...    35   2.2  
UniRef50_Q7NC07 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  
UniRef50_Q33565 Cluster: CR3 protein; n=2; Trypanosoma brucei|Re...    33   6.6  
UniRef50_Q23Q77 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  
UniRef50_Q5CRF2 Cluster: Putative uncharacterized protein; n=2; ...    33   8.8  
UniRef50_Q4N8H7 Cluster: Putative uncharacterized protein; n=1; ...    33   8.8  
UniRef50_A5K0J2 Cluster: Putative uncharacterized protein; n=1; ...    33   8.8  

>UniRef50_Q4Z5J9 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 504

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 554 SFYFESCFYKTRRSQNGS*VFTEVNYFGSMLLAIPCLCTILS 679
           SFYF  C   ++  +  + V  ++NYF   L   PC C  LS
Sbjct: 436 SFYFSQCTKGSKNEKIKNEVTNQINYFDKRLYTKPCKCMFLS 477


>UniRef50_Q7NC07 Cluster: Putative uncharacterized protein; n=1;
           Mycoplasma gallisepticum|Rep: Putative uncharacterized
           protein - Mycoplasma gallisepticum
          Length = 630

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 197 YVNMDLLPYLSTLNFNSIS*NYCCNVNNILLYDLLNASTKKSRVNYNPRNPSFFCEI 367
           Y  +D+  + +   FN+   NY  N++N L Y+ L+A T   ++N N   P +   I
Sbjct: 291 YQMIDIFNFKNQNIFNTFQSNYTTNLDNYLYYNKLDAPTYSYQLNENNVLPRYLVNI 347


>UniRef50_Q33565 Cluster: CR3 protein; n=2; Trypanosoma brucei|Rep:
           CR3 protein - Trypanosoma brucei
          Length = 70

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = -3

Query: 198 YLLVCYFFCTSM--DIFICLV-SFLFLIYF*CNLINSRPI*CKRIFFEMNLHFVNFDCTY 28
           Y L  +FFC     D+F+CL+ SF FL+ F C L N   + C   FF      ++FD   
Sbjct: 11  YCLFVHFFCFLFVCDLFLCLLFSFCFLLDF-CFLFNMGLLLCLFFFF-----ILSFDMCI 64

Query: 27  VTVFLI 10
             +F+I
Sbjct: 65  KLLFII 70


>UniRef50_Q23Q77 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 497

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +2

Query: 224 LSTLNFNSIS*NYCCNVNNILLYDLLNASTKKSRVNYN-PRNPSFFCEICNFKEGCTVFT 400
           ++T N      N+    +  ++Y  LN      R + N  RNP FF +   FKE    F 
Sbjct: 247 ITTENIRLYDENFRIFYDENIIYIYLNYKLILQRFSINRTRNPYFFFDFSYFKE--RFFA 304

Query: 401 KQSVTKNGKGMFKWLSNN 454
           +Q+V ++ K  +   SNN
Sbjct: 305 RQNVIEDQKDKYNMQSNN 322


>UniRef50_Q5CRF2 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 838

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 22/71 (30%), Positives = 31/71 (43%)
 Frame = +2

Query: 191 SKYVNMDLLPYLSTLNFNSIS*NYCCNVNNILLYDLLNASTKKSRVNYNPRNPSFFCEIC 370
           SKY N D   Y S    N     Y   +NN L  + +  S   +    N +NP  F EI 
Sbjct: 756 SKYDNFDHKRYRSYYKDNDHE--YLFQLNNFLNIECIYKSKLFTEAGNNIKNPQIFNEIV 813

Query: 371 NFKEGCTVFTK 403
           +F   C+ ++K
Sbjct: 814 DFDRLCSKWSK 824


>UniRef50_Q4N8H7 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 729

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
 Frame = +2

Query: 164 IEVQKK*HTSKYVNMDLLPYLSTLNFNSIS*NYCCNVNNILLYDLLNASTK--------- 316
           IEV +  +TS  VN++  PY ++  FN    N       + LY   N ST+         
Sbjct: 473 IEVNQPYNTSTRVNVNQ-PYNTSTRFNLDPSNPTRTTTRVNLYQPYNTSTRVNLNPSNPT 531

Query: 317 --KSRVNYNPRNPSFFCEICNFKEGCTVFTKQSVTKNGKGMFKWLSN 451
              +RVN NP NP+      N  +  T  T   V+ N     + ++N
Sbjct: 532 RTSTRVNLNPSNPTRTSTRVNINQPTTTRTSTRVSVNQPTRTRTITN 578


>UniRef50_A5K0J2 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1561

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 257  NYCCNVNNILLYDLLNASTKKSRVNYNPRNPSFFCEICNFKEG 385
            NY C VNN         S K+  +N++ R   FFC  CN   G
Sbjct: 1505 NYKCTVNNCSKEFSSEFSLKEHIINFHHRVKRFFCSKCNMSFG 1547


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,856,311
Number of Sequences: 1657284
Number of extensions: 10459873
Number of successful extensions: 23063
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23041
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)