Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_F07
(723 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131078-1|BAC85128.1| 1386|Homo sapiens FLJ00274 protein protein. 33 1.4
CR457340-1|CAG33621.1| 350|Homo sapiens DKFZP566H073 protein. 31 4.2
BC010139-1|AAH10139.1| 350|Homo sapiens ring finger protein 167... 31 4.2
AL834284-1|CAD38958.1| 349|Homo sapiens hypothetical protein pr... 31 4.2
AL079315-1|CAB45281.1| 158|Homo sapiens hypothetical protein pr... 31 4.2
AL050060-1|CAB43253.1| 324|Homo sapiens hypothetical protein pr... 31 4.2
AK025329-1|BAB15113.1| 350|Homo sapiens protein ( Homo sapiens ... 31 4.2
Z33622-1|CAA83916.1| 737|Homo sapiens muscle glycogen synthase ... 31 5.5
U32573-1|AAB60385.1| 736|Homo sapiens UDP glucose:glycogen 4-al... 31 5.5
J04501-1|AAA88046.1| 737|Homo sapiens glycogen synthase protein. 31 5.5
BC007688-1|AAH07688.1| 737|Homo sapiens glycogen synthase 1 (mu... 31 5.5
BC003182-1|AAH03182.1| 673|Homo sapiens GYS1 protein protein. 31 5.5
BC002617-1|AAH02617.1| 737|Homo sapiens glycogen synthase 1 (mu... 31 5.5
AK223579-1|BAD97299.1| 737|Homo sapiens glycogen synthase 1 (mu... 31 5.5
>AK131078-1|BAC85128.1| 1386|Homo sapiens FLJ00274 protein protein.
Length = 1386
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -3
Query: 691 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLTNEAHDAPVGDEIASTAEPDATE 524
H DQ+ + P +G +D+EG DPA D P +++ AE + E
Sbjct: 122 HIHGEDQEPPDTPGEGEEDDEEGCASTDPAGADEGSGPDRPT-EDMGQDAEDTSEE 176
>CR457340-1|CAG33621.1| 350|Homo sapiens DKFZP566H073 protein.
Length = 350
Score = 31.1 bits (67), Expect = 4.2
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 691 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLT 590
H D+DQ+EE TQG E DEG D PA+ T
Sbjct: 276 HRGPGDEDQEEE-TQGQEEGDEGEPRDHPASERT 308
>BC010139-1|AAH10139.1| 350|Homo sapiens ring finger protein 167
protein.
Length = 350
Score = 31.1 bits (67), Expect = 4.2
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 691 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLT 590
H D+DQ+EE TQG E DEG D PA+ T
Sbjct: 276 HRGPGDEDQEEE-TQGQEEGDEGEPRDHPASERT 308
>AL834284-1|CAD38958.1| 349|Homo sapiens hypothetical protein
protein.
Length = 349
Score = 31.1 bits (67), Expect = 4.2
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 691 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLT 590
H D+DQ+EE TQG E DEG D PA+ T
Sbjct: 275 HRGPGDEDQEEE-TQGQEEGDEGEPRDHPASERT 307
>AL079315-1|CAB45281.1| 158|Homo sapiens hypothetical protein
protein.
Length = 158
Score = 31.1 bits (67), Expect = 4.2
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 691 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLT 590
H D+DQ+EE TQG E DEG D PA+ T
Sbjct: 84 HRGPGDEDQEEE-TQGQEEGDEGEPRDHPASERT 116
>AL050060-1|CAB43253.1| 324|Homo sapiens hypothetical protein
protein.
Length = 324
Score = 31.1 bits (67), Expect = 4.2
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 691 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLT 590
H D+DQ+EE TQG E DEG D PA+ T
Sbjct: 250 HRGPGDEDQEEE-TQGQEEGDEGEPRDHPASERT 282
>AK025329-1|BAB15113.1| 350|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21676 fis, clone COL09164. ).
Length = 350
Score = 31.1 bits (67), Expect = 4.2
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 691 HSRDHDQDQKEEPTQGPYEDDEGMVGDDPAAYLT 590
H D+DQ+EE TQG E DEG D PA+ T
Sbjct: 276 HRGPGDEDQEEE-TQGQEEGDEGEPRDHPASERT 308
>Z33622-1|CAA83916.1| 737|Homo sapiens muscle glycogen synthase
protein.
Length = 737
Score = 30.7 bits (66), Expect = 5.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 718 LPLFASXDAHSRDHDQDQKEEPTQGPYEDDEGMVGDDPAA 599
+P S HS H + +E+P GP E+D +D A
Sbjct: 642 VPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEA 681
>U32573-1|AAB60385.1| 736|Homo sapiens UDP glucose:glycogen
4-alpha-D- glycosytransferase protein.
Length = 736
Score = 30.7 bits (66), Expect = 5.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 718 LPLFASXDAHSRDHDQDQKEEPTQGPYEDDEGMVGDDPAA 599
+P S HS H + +E+P GP E+D +D A
Sbjct: 641 VPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEA 680
>J04501-1|AAA88046.1| 737|Homo sapiens glycogen synthase protein.
Length = 737
Score = 30.7 bits (66), Expect = 5.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 718 LPLFASXDAHSRDHDQDQKEEPTQGPYEDDEGMVGDDPAA 599
+P S HS H + +E+P GP E+D +D A
Sbjct: 642 VPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEA 681
>BC007688-1|AAH07688.1| 737|Homo sapiens glycogen synthase 1
(muscle) protein.
Length = 737
Score = 30.7 bits (66), Expect = 5.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 718 LPLFASXDAHSRDHDQDQKEEPTQGPYEDDEGMVGDDPAA 599
+P S HS H + +E+P GP E+D +D A
Sbjct: 642 VPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEA 681
>BC003182-1|AAH03182.1| 673|Homo sapiens GYS1 protein protein.
Length = 673
Score = 30.7 bits (66), Expect = 5.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 718 LPLFASXDAHSRDHDQDQKEEPTQGPYEDDEGMVGDDPAA 599
+P S HS H + +E+P GP E+D +D A
Sbjct: 578 VPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEA 617
>BC002617-1|AAH02617.1| 737|Homo sapiens glycogen synthase 1
(muscle) protein.
Length = 737
Score = 30.7 bits (66), Expect = 5.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 718 LPLFASXDAHSRDHDQDQKEEPTQGPYEDDEGMVGDDPAA 599
+P S HS H + +E+P GP E+D +D A
Sbjct: 642 VPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEA 681
>AK223579-1|BAD97299.1| 737|Homo sapiens glycogen synthase 1
(muscle) variant protein.
Length = 737
Score = 30.7 bits (66), Expect = 5.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 718 LPLFASXDAHSRDHDQDQKEEPTQGPYEDDEGMVGDDPAA 599
+P S HS H + +E+P GP E+D +D A
Sbjct: 642 VPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDEDEEA 681
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,123,060
Number of Sequences: 237096
Number of extensions: 1486868
Number of successful extensions: 7178
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7178
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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