Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_F07
         (723 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16961-1|CAA34835.1|  502|Drosophila melanogaster protein ( Dros...    31   2.1  
AY118681-1|AAM50541.1|  585|Drosophila melanogaster AT10577p pro...    31   2.1  
AE014296-2595|AAF49568.2|  500|Drosophila melanogaster CG6117-PA...    30   3.7  
AE014296-2594|AAN11771.2|  583|Drosophila melanogaster CG6117-PB...    30   3.7  
BT010298-1|AAQ23616.1|  854|Drosophila melanogaster LD10043p pro...    29   6.4  
AE014296-446|AAF47640.1|  854|Drosophila melanogaster CG9004-PA ...    29   6.4  

>X16961-1|CAA34835.1|  502|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. protein kinase DC2.
           ).
          Length = 502

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -3

Query: 688 SRDHDQDQKEEPTQGPYEDDEGMVGD-DPAAYLTNEAHDAPVGDEIASTAEPDATEHS 518
           S DHD D  EE  +   ++ EG   D D A + ++E+ +   G+E     + D +E S
Sbjct: 119 SADHDNDVDEEDEEDDEDEGEGNGRDADDATHDSSESIEEDDGNETDDEEDDDESEES 176


>AY118681-1|AAM50541.1|  585|Drosophila melanogaster AT10577p
           protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -3

Query: 688 SRDHDQDQKEEPTQGPYEDDEGMVGD-DPAAYLTNEAHDAPVGDEIASTAEPDATEHS 518
           S DHD D  EE  +   ++ EG   D D A + ++E+ +   G+E     + D +E S
Sbjct: 202 SADHDNDVDEEDEEDDEDEGEGNGRDADDATHDSSESIEEDDGNETDDEEDDDESEES 259


>AE014296-2595|AAF49568.2|  500|Drosophila melanogaster CG6117-PA,
           isoform A protein.
          Length = 500

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -3

Query: 688 SRDHDQDQKEEPTQGPYEDDEGMVGD-DPAAYLTNEAHDAPVGDEIASTAEPDATEHS 518
           S DHD D  EE  +    + EG   D D A + ++E+ +   G+E     + D +E S
Sbjct: 117 SADHDNDVDEEDEEDDENEGEGNGRDADDATHDSSESIEEDDGNETDDEEDDDESEES 174


>AE014296-2594|AAN11771.2|  583|Drosophila melanogaster CG6117-PB,
           isoform B protein.
          Length = 583

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -3

Query: 688 SRDHDQDQKEEPTQGPYEDDEGMVGD-DPAAYLTNEAHDAPVGDEIASTAEPDATEHS 518
           S DHD D  EE  +    + EG   D D A + ++E+ +   G+E     + D +E S
Sbjct: 200 SADHDNDVDEEDEEDDENEGEGNGRDADDATHDSSESIEEDDGNETDDEEDDDESEES 257


>BT010298-1|AAQ23616.1|  854|Drosophila melanogaster LD10043p
           protein.
          Length = 854

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -3

Query: 682 DHDQDQKEEPTQGPYEDDEGMVGDDPAAYLTNEAHDAPVGDE 557
           + D++ ++EP     EDD G  G+D    LT E   +    E
Sbjct: 245 EEDKEDRDEPMDNFSEDDSGSEGEDDDEDLTGEEEQSEEDSE 286


>AE014296-446|AAF47640.1|  854|Drosophila melanogaster CG9004-PA
           protein.
          Length = 854

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -3

Query: 682 DHDQDQKEEPTQGPYEDDEGMVGDDPAAYLTNEAHDAPVGDE 557
           + D++ ++EP     EDD G  G+D    LT E   +    E
Sbjct: 245 EEDKEDRDEPMDNFSEDDSGSEGEDDDEDLTGEEEQSEEDSE 286


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,768,863
Number of Sequences: 53049
Number of extensions: 491026
Number of successful extensions: 1573
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)