Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_F06
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.21 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.6  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   6.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   6.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   6.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   6.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = -1

Query: 723 VFFYQYYYIPACVKFFIL*SLEVLI*ICTGCFNIYIVIMLC 601
           ++++ Y ++  C  F I  ++ +L  +C   F   ++I+LC
Sbjct: 258 IYYFYYMHLLFCCAFIIF-TMHLLFLLCIYYFYCALIILLC 297


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 272 FFFIAYLQSFTLLIVESDF 216
           F+F  Y+ S+TLL V S F
Sbjct: 56  FYFSFYITSYTLLSVYSLF 74


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +1

Query: 421 ICRLFFLNCSSK 456
           +C L+F+NC++K
Sbjct: 221 LCSLWFINCTAK 232


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 272 FFFIAYLQSFTLLIVESDF 216
           F+F  Y+ S+TLL V S F
Sbjct: 56  FYFSFYITSYTLLSVYSLF 74


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +1

Query: 421 ICRLFFLNCSSK 456
           +C L+F+NC++K
Sbjct: 221 LCSLWFINCTAK 232


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 315 NTILPSINSSKWCSNKY 365
           N I PSIN    C N Y
Sbjct: 360 NLISPSINDDGTCGNGY 376


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 315 NTILPSINSSKWCSNKY 365
           N I PSIN    C N Y
Sbjct: 361 NLISPSINDDGTCGNGY 377


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 315 NTILPSINSSKWCSNKY 365
           N I PSIN    C N Y
Sbjct: 361 NLISPSINDDGTCGNGY 377


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 21  TEITGCQRTRH*VNL 65
           TE+T C + +H VNL
Sbjct: 222 TELTFCNKIKHLVNL 236


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +2

Query: 581 HNIYRLRHNIITM*ILKHPVHIYISTSSDHKIKNLTQ 691
           + IY+  +NI+ + +  + V+I  +     K+  +TQ
Sbjct: 40  YKIYKYTYNIVAVSLTAYMVYITTNLRITQKLSIVTQ 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,291
Number of Sequences: 336
Number of extensions: 3466
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)