Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_F05
         (814 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0001555A0E Cluster: PREDICTED: similar to ankyrin re...    37   0.53 
UniRef50_UPI0000E1F5C0 Cluster: PREDICTED: hypothetical protein;...    37   0.53 
UniRef50_A0TCH5 Cluster: LigA; n=1; Burkholderia ambifaria MC40-...    36   0.92 
UniRef50_A7DLE4 Cluster: Endonuclease III; n=2; Methylobacterium...    34   3.7  
UniRef50_UPI0000E4919E Cluster: PREDICTED: hypothetical protein;...    34   4.9  
UniRef50_Q1EA29 Cluster: Putative uncharacterized protein; n=1; ...    34   4.9  
UniRef50_Q1GL83 Cluster: Periplasmic solute binding protein; n=6...    33   6.5  
UniRef50_Q5KIX7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_Q3BKF6 Cluster: Putative uncharacterized protein; n=3; ...    33   8.6  

>UniRef50_UPI0001555A0E Cluster: PREDICTED: similar to ankyrin
           repeat and FYVE domain containing 1, partial; n=1;
           Ornithorhynchus anatinus|Rep: PREDICTED: similar to
           ankyrin repeat and FYVE domain containing 1, partial -
           Ornithorhynchus anatinus
          Length = 619

 Score = 37.1 bits (82), Expect = 0.53
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +3

Query: 621 WRPARQSMRSRLQXERREP-R*SDTRPDRLPPYPXHLRTDPEWVLPSGPGRDRGN-ERPX 794
           W    ++++   +  R  P    D  PD LPP    LR      +P+G GR RG  ERP 
Sbjct: 397 WSLLHRAIQRGKEAARERPLTPGDRPPDHLPPSRTTLRVSSTSPIPAGEGRGRGGFERPR 456

Query: 795 LANS 806
           L +S
Sbjct: 457 LGDS 460


>UniRef50_UPI0000E1F5C0 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 274

 Score = 37.1 bits (82), Expect = 0.53
 Identities = 23/63 (36%), Positives = 26/63 (41%)
 Frame = +3

Query: 603 RGRSARWRPARQSMRSRLQXERREPR*SDTRPDRLPPYPXHLRTDPEWVLPSGPGRDRGN 782
           RG      PA  S R R + + R PR     P R  P P HLR    W LP G     G+
Sbjct: 7   RGGHTLHNPAAASARGRRRGQPR-PRQDGRGPGRRTPPPRHLRPTALWPLPGGSAAPPGD 65

Query: 783 ERP 791
             P
Sbjct: 66  ACP 68


>UniRef50_A0TCH5 Cluster: LigA; n=1; Burkholderia ambifaria
           MC40-6|Rep: LigA - Burkholderia ambifaria MC40-6
          Length = 832

 Score = 36.3 bits (80), Expect = 0.92
 Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
 Frame = +3

Query: 549 RTTTKPDFNKRGAPTCRWR-GRSARWRPARQSMRSRLQXER----REPR*SDTRPDRLPP 713
           R   +P   +  A TCRW   RSAR RP R + R+R +  R    R PR   TRP R  P
Sbjct: 732 RAARRPPVARGRAATCRWTPRRSARSRP-RATRRTRRRASRARRSRRPRTPPTRPSRPAP 790


>UniRef50_A7DLE4 Cluster: Endonuclease III; n=2; Methylobacterium
           extorquens PA1|Rep: Endonuclease III - Methylobacterium
           extorquens PA1
          Length = 372

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +3

Query: 576 KRGAPTCRWRG--RSARWRPARQSMRSRLQXERREPR*SDTRP 698
           +R AP CR R   RSAR RPA +  RSR + +   P  S +RP
Sbjct: 19  RRRAPACRGRRSRRSARSRPASRRSRSRERRDSTTPSRSGSRP 61


>UniRef50_UPI0000E4919E Cluster: PREDICTED: hypothetical protein; n=1;
            Strongylocentrotus purpuratus|Rep: PREDICTED:
            hypothetical protein - Strongylocentrotus purpuratus
          Length = 2051

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
 Frame = +3

Query: 549  RTTTKPDFNKRGAPTCRWRGRSARWRPARQSMRSRLQXERREPR*SDTRPDRLPPYPXHL 728
            R+   PD   R +P  R R RS   R  R   RS  Q  R+  R  D+ P +   Y    
Sbjct: 1515 RSYRSPDRRSRRSPERR-RSRSPDKRKRRSRSRSISQDRRKRRR--DSPPRKRNSYSPSK 1571

Query: 729  RTDPEWVLPS-GPGRDRGNERP 791
            R  P     S  P RD+GN  P
Sbjct: 1572 RRSPSKSKNSRSPSRDKGNRSP 1593


>UniRef50_Q1EA29 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 744

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
 Frame = -2

Query: 795 AADAHSRDHDQDQKEEPTQGPYEDXEG-MVGDD--PAAYLTNEAHDAPXGDEIASTAEPD 625
           A D+ +   + + KE+P+ G  ED +G +V DD  P++   N+  +     E A+TAEP 
Sbjct: 334 AQDSQATSEESEGKEDPSTGLEEDGDGEIVVDDIPPSSMTQNDTPNDTTSSE-ANTAEPQ 392

Query: 624 A 622
           A
Sbjct: 393 A 393


>UniRef50_Q1GL83 Cluster: Periplasmic solute binding protein; n=6;
           Proteobacteria|Rep: Periplasmic solute binding protein -
           Silicibacter sp. (strain TM1040)
          Length = 378

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
 Frame = -2

Query: 813 DSHYSRAADAHSRD-HDQDQKEEPTQGPYEDXEGMVGDDPAAYLTNEAHDAPXGDEIAST 637
           D+H   A D H  + HD D  +        D +    D  A     +AHDA   D   + 
Sbjct: 135 DAHEDHAHDGHGHEEHDHDDHKGHDDHGAHDHDDHAHDQDAHGHDEDAHDAHDHDSHETA 194

Query: 636 AEPDATEHSVHASGMLAPPAY*SP 565
            +     H  HA   + P A+ +P
Sbjct: 195 HDDHGHGHDDHAHDGVDPHAWLAP 218


>UniRef50_Q5KIX7 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 482

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -2

Query: 807 HYSRAADAHSRDHDQDQKEEPTQGPYEDXEGMVGD-DPAAYLTNEAHDAPXGDEIASTAE 631
           +Y+    +++  H+Q Q   P  GPY D E   G  DP  Y  N  + AP  + ++++ E
Sbjct: 316 YYAATTPSNTDIHNQPQ---PEMGPYHDYEDPAGGYDP--YAVNMVNLAPSNERLSTSTE 370

Query: 630 P 628
           P
Sbjct: 371 P 371


>UniRef50_Q3BKF6 Cluster: Putative uncharacterized protein; n=3;
           Magnetospirillum gryphiswaldense|Rep: Putative
           uncharacterized protein - Magnetospirillum
           gryphiswaldense
          Length = 270

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +3

Query: 603 RGRSARWRPARQSMRSRLQXE-RREPR*SDTRPDRLPPYPXHLRTDPEWVLPSGPGRDRG 779
           R   A+  PAR   R       RR+PR     P  +PP    LR  P+ + PSGP R R 
Sbjct: 189 RPAPAKPPPARVRKRRICPSNGRRQPRLWPWPPRPVPPRRQLLRLRPKTMAPSGPDRPRA 248

Query: 780 NER 788
           + R
Sbjct: 249 SPR 251


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,481,716
Number of Sequences: 1657284
Number of extensions: 11232422
Number of successful extensions: 27847
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27775
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)