Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_E24
         (720 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CA3B4 Cluster: hypothetical protein TTHERM_0052...    40   0.082
UniRef50_UPI0000F2BEBB Cluster: PREDICTED: similar to olfactory ...    36   1.3  
UniRef50_Q59YC7 Cluster: Potential COP9 signalosome subunit CSN2...    34   4.1  
UniRef50_UPI0000E4A817 Cluster: PREDICTED: similar to MGC53218 p...    33   5.4  
UniRef50_Q552W8 Cluster: Putative uncharacterized protein; n=2; ...    33   7.1  
UniRef50_UPI0000583CE4 Cluster: PREDICTED: hypothetical protein;...    33   9.4  
UniRef50_Q05FF8 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  

>UniRef50_UPI00006CA3B4 Cluster: hypothetical protein
           TTHERM_00525120; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00525120 - Tetrahymena
           thermophila SB210
          Length = 258

 Score = 39.5 bits (88), Expect = 0.082
 Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
 Frame = -2

Query: 545 LGSNKFMKLLK--RLQGNPCVERIIIILHKDCMAHSSKLRIHMNYIANAVISFDSNNVLK 372
           + S +  +LL+  ++Q +P  E + + L ++   +  KL I M Y+    I     N+LK
Sbjct: 158 VNSKELFELLRVNQIQKDPLTEALKLFLDQNGELNKGKLNIMMKYLGYGQIDTKEMNILK 217

Query: 371 ALINIKKGAKFIKTE--EIFSLCSK 303
            +++I +  K  + +  E+FS C+K
Sbjct: 218 DILDIDQDGKITQEDLKEVFSGCNK 242


>UniRef50_UPI0000F2BEBB Cluster: PREDICTED: similar to olfactory
           receptor MOR256-19; n=1; Monodelphis domestica|Rep:
           PREDICTED: similar to olfactory receptor MOR256-19 -
           Monodelphis domestica
          Length = 420

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 19/74 (25%), Positives = 39/74 (52%)
 Frame = -2

Query: 584 TMIVDSVHQMFYSLGSNKFMKLLKRLQGNPCVERIIIILHKDCMAHSSKLRIHMNYIANA 405
           T++  +++ + Y+L +      LKRL G   V+  ++  ++    H S  R H+NY +  
Sbjct: 348 TVVTPTLNPLIYTLRNKDMKGALKRLLGKAVVKLPLLSCYRSFFNHLSFERFHLNYTSKW 407

Query: 404 VISFDSNNVLKALI 363
           +I+  SN V ++ +
Sbjct: 408 LINL-SNCVFRSTL 420


>UniRef50_Q59YC7 Cluster: Potential COP9 signalosome subunit CSN2;
           n=1; Candida albicans|Rep: Potential COP9 signalosome
           subunit CSN2 - Candida albicans (Yeast)
          Length = 747

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 224 LSTFKIEVDQTEKLQKYNLKLPYMSKIHEGESKI 123
           L T  IE+D   K+ ++NL LP M++++   SKI
Sbjct: 243 LQTIAIEIDYLTKINQFNLNLPRMNQLYRMSSKI 276


>UniRef50_UPI0000E4A817 Cluster: PREDICTED: similar to MGC53218
           protein; n=3; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to MGC53218 protein -
           Strongylocentrotus purpuratus
          Length = 319

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
 Frame = -2

Query: 572 DSVHQMFYSLGSNKFMKLLKRLQGNPCVERIIIILHKDCM----AHSSKLR---IH-MNY 417
           D++ Q+   L S+K+    K + GN  +   +I+ HKDCM    AH + ++   +H  N 
Sbjct: 16  DNLKQLSILLRSHKYDIAQKDIHGNSPLHLSVILGHKDCMHLLLAHGAPVKSKNVHGWNP 75

Query: 416 IANAVISFDSNNVLKALINIKKGAK 342
           +A A+   D N +   L  +K+ ++
Sbjct: 76  LAEAISYGDRNTISLLLRKLKQQSR 100


>UniRef50_Q552W8 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 975

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 27/117 (23%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
 Frame = -2

Query: 710 INFHIYEHQEELWKEAFKNK-SNVKVYSEYQ--DXKYDIYTK--IPCTMIVDSVHQMFYS 546
           +N  I +H E+L+ + F+NK  N++++ + +  + +YD ++K  +   +   +++ M + 
Sbjct: 1   MNESISDHNEKLFWKVFRNKYLNIEIFKQLESTEIEYDSFSKYSVSSKIKYKNIYSMEFM 60

Query: 545 LGSNKFMKLLKRLQGNPCVERIIIILHKDCMAHSSKLRIHMNYIANAVISFDSNNVL 375
           +  N F  L+ ++  N       +I  K  +A   KL ++     N+  + D+NN L
Sbjct: 61  INKNLFDLLVNKIINNE-----YVIYEKKAIASLIKLSVN-----NSNNNNDNNNKL 107


>UniRef50_UPI0000583CE4 Cluster: PREDICTED: hypothetical protein;
           n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 383

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 118 TSQMLLMTGMKKILMTILIFKICYQPYHYVFAMR 17
           TS       +K ILM + +F +C+ PYH V  MR
Sbjct: 275 TSLRYKKRAIKMILMVVGLFSVCWLPYHVVVLMR 308


>UniRef50_Q05FF8 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Carsonella ruddii PV|Rep: Putative
           uncharacterized protein - Carsonella ruddii (strain PV)
          Length = 337

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +1

Query: 289 FNVLVLLHNEKISSVFINLAPFLILINAFKTLLL 390
           FN+ +L+ N    +VF+NL  FL +IN +K  +L
Sbjct: 272 FNIKILIKNISYFTVFVNLKKFLSIINYYKNEVL 305


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,305,942
Number of Sequences: 1657284
Number of extensions: 10151605
Number of successful extensions: 30156
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30148
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)