Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_E23
(798 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 32 0.11
SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subu... 31 0.25
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.0
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 28 1.3
SPBC36.12c |git7||SGT1-like protein Git7|Schizosaccharomyces pom... 28 1.3
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 1.8
SPBC19G7.14c |cog5||Golgi transport complex subunit Cog5 |Schizo... 27 2.4
SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr 3|||M... 27 2.4
SPAC27E2.11c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 3.1
SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta... 27 4.1
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 27 4.1
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 27 4.1
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 27 4.1
SPAC23A1.16c |||DUF408 family protein|Schizosaccharomyces pombe|... 27 4.1
SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding p... 27 4.1
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 26 5.4
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 26 5.4
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 26 5.4
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 26 5.4
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 5.4
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 26 5.4
SPBC4F6.09 |str1||siderophore-iron transporter Str1 |Schizosacch... 26 5.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.2
SPCC338.02 |mug112||sequence orphan|Schizosaccharomyces pombe|ch... 26 7.2
SPCC1235.10c |sec6||exocyst complex subunit Sec6|Schizosaccharom... 26 7.2
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 25 9.5
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 9.5
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 9.5
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 25 9.5
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T T + +S T GT +E TAGTIT++
Sbjct: 479 TSGTVEVVEPTAGTITETIVSGSKTFTSTFPASGTTSGTVEVVEPTAGTITET 531
Score = 30.7 bits (66), Expect = 0.25
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T T + ++ T GT +E TAGTIT++
Sbjct: 689 TSGTVEVVEPTAGTITETIVSGSKTFTSTFPANGTTSGTVEVVEPTAGTITET 741
Score = 29.5 bits (63), Expect = 0.58
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + T T + ++ T GT +E TAGTIT++
Sbjct: 409 TSGTVEVVEPTAGTITKTIVSGSKTFTSTFPANGTTSGTVEVVEPTAGTITET 461
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + ++ T GT +E TAGTIT++
Sbjct: 514 TSGTVEVVEPTAGTITETIVSGSKAFTSTFPANGTTSGTVEVVEPTAGTITET 566
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + ++ T GT +E TAGTIT++
Sbjct: 654 TSGTVEVVEPTAGTITETIVSGSKAFTSTFPANGTTSGTVEVVEPTAGTITET 706
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + ++ T GT +E TAGTIT++
Sbjct: 374 TSGTVEVVEPTAGTITETIVSGSKAFTSTFPANGTTSGTVEVVEPTAGTITKT 426
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + + + T GT +E TAGT+T++
Sbjct: 899 TSGTVEIVAPTAGTVTETIVSGSIPFTSTIPAQGTTSGTVEVVEPTAGTVTET 951
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + + + T GT +E TAGT+T++
Sbjct: 969 TSGTVEIVAPTAGTVTETIVSGSIPFTSTIPAQGTTSGTVEVVEPTAGTVTET 1021
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + +S T GT +E TAGTIT++
Sbjct: 339 TSGTVEVVEPTAGTVTETIVSGSVGYTSTFPASGTTSGTVEVVEPTAGTITET 391
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + +S T GT +E TAGT+T++
Sbjct: 549 TSGTVEVVEPTAGTITETIVSGSVGYTSTFPASGTTSGTVEVVEPTAGTVTET 601
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + +S T GT +E TAGTIT++
Sbjct: 619 TSGTVEVVEPTAGTVTETIVSGSVGYTSTFPASGTTSGTVEVVEPTAGTITET 671
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + +S T GT +E TAGT+T++
Sbjct: 724 TSGTVEVVEPTAGTITETIVSGSVGYTSTFPASGTTSGTVEVVEPTAGTVTET 776
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + +S T GT +E TAGT+T++
Sbjct: 584 TSGTVEVVEPTAGTVTETIVSGSVGYTSTFPASGTTSGTVEVVEPTAGTVTET 636
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + ++ T GT +E TAGTIT++
Sbjct: 234 TSGTVEVVEPTAGTITETIVSGSVGYTSTFPANGTTSGTVEVVEPTAGTITET 286
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + ++ T GT +E TAGTIT++
Sbjct: 269 TSGTVEVVEPTAGTITETIVSGSVGYTSTFPANGTTSGTVEVVEPTAGTITET 321
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + ++ T GT +E TAGTIT++
Sbjct: 444 TSGTVEVVEPTAGTITETIVSGSVGYTSTFPANGTTSGTVEVVEPTAGTITET 496
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
+SG E + + + +T + ++ T GT +E TAGT+T++
Sbjct: 304 TSGTVEVVEPTAGTITETIVSGSVGYTSTFPANGTTSGTVEVVEPTAGTVTET 356
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQS 186
SSG + + + +T + + + T GT +E TAGT+T++
Sbjct: 794 SSGAVIVVEPTAGTVTETIVSGSIPFTSTIPAQGTTSGTVEVVEPTAGTVTET 846
>SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subunit
Rpc82 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 30.7 bits (66), Expect = 0.25
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = -2
Query: 545 DTKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMD 366
D Y L+ H++A L +DA IEKA+R D+ K + Q +K +
Sbjct: 507 DRAYSLLLDELYHVIARLYMRLRDARAQRAQLIEKAERIDI-------KGNEEQYLQKFE 559
Query: 365 KDGLVKMSSGVTEQLLSVSR 306
+ L K+ S + LL SR
Sbjct: 560 QAELKKLYSYEEKLLLQASR 579
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.7 bits (61), Expect = 1.0
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = -2
Query: 449 IEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMSS-GVTEQLLSVSRQLADTTQKSQN 273
I K +++ K S S ++ KK+ + + S V +Q S ++ + + +S++
Sbjct: 32 ITKEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESES 91
Query: 272 TLDNLVSSSSTVHGTQSELENTAGTITQSSKLXEEI 165
+ SSSS + SE E+++ + SS+ EE+
Sbjct: 92 SSSESESSSSESESSSSESESSSSE-SSSSESEEEV 126
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -2
Query: 392 VRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLV 255
++ +K ++ V SS E +VSR L+ T +K + LDN +
Sbjct: 438 IQALRKNINNASTVFNSSNTAESSDNVSRSLSSTERKKRRELDNAI 483
>SPBC36.12c |git7||SGT1-like protein Git7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2
Query: 563 MVKKXGDTKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLK 417
+ KK DT +S R L LL++++ + I FA++ ++EDL K
Sbjct: 68 LAKKKSDTGLIGYCQSLRGLAYYLLEQYQSSAICFGFALKHLKKEDLTK 116
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 379 FLCRTDDFSLS-LHFNKSSLCAFSIANILFILASLNSLRRQAKRCLCDSNSVSYF 540
FL D S L+F+++SL + + FI S + ++ K D NS+SYF
Sbjct: 947 FLVEPDFLPASILYFDRASLASTNAYTDPFIPYSTDYTKKNPKEPTADVNSLSYF 1001
>SPBC19G7.14c |cog5||Golgi transport complex subunit Cog5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 411
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -2
Query: 323 LLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLXEEIRT 159
L V RQ+ D + TL VSSS QS L++ G + Q + E IR+
Sbjct: 49 LKEVERQITDLIVHEETTLTKNVSSSL---NAQSYLQDIEGKLEQLMLVYERIRS 100
>SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 609
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 281 SQNTLDNLVSSSSTVHGTQSELENTAGTIT 192
S+ L S+S ++ GT +E TAGT+T
Sbjct: 193 SEEFTTTLASASGSISGTVEVIEPTAGTVT 222
>SPAC27E2.11c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 81
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -2
Query: 347 MSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSS 183
M S V V+ LA S N +S+ T +GT T+ T TQSS
Sbjct: 1 MYSRVLSVAAIVTMALAVQAANSTAPYGNTTNSTGTTNGTNGTNTTTSSTATQSS 55
>SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -2
Query: 530 TELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSSV 390
TEL+ L + E K+ ++S+F Q+ +LL +D EK+ +
Sbjct: 62 TELKFISKYLQISIPETKEGPVSSLFKAVSEQKPELLGNTDFEKAQI 108
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 506 LLACLLKEFKDANINSMFAIEKAQREDL 423
+L C+LKE+ D + S FA+ A + L
Sbjct: 917 ILECMLKEYYDTFLKSPFAVPNAVQAQL 944
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 317 SVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSS 183
S S + TT++ QN+ LV SS+ VH S L+N I ++
Sbjct: 444 SFSTKTLATTKEIQNS-PTLVESSTVVHHDPSYLQNQTSEINDTN 487
>SPBC1347.09 |||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 284
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 461 SMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMS 342
S AI K +L+ DN ++S+R K D+D L+ S
Sbjct: 24 STLAISKVISSKILQFEDNSETSLRHDLPKYDQDRLLLTS 63
>SPAC23A1.16c |||DUF408 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 113 LFGGVPVHCTEEAFLIVCDYSFEIA 39
++GG+ +C+++ FL C Y E++
Sbjct: 107 VYGGLNYYCSKDCFLKSCQYMVELS 131
>SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding
protein 1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 567
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +3
Query: 90 MYRHTAKKNKNAKNMITLSVNSLRPYFFX*FARLRNRSCCIFQFRLCSMHC 242
+Y + K ++K +I + N + Y F F ++ CI LC C
Sbjct: 314 LYTNRFGKVSSSKAIIDMETNLCKGYGFACFEEEKSALICISAMTLCGYQC 364
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 26.2 bits (55), Expect = 5.4
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = -2
Query: 533 DTELESQRHLLACLLKEFKDANINSMFAIEKAQR-EDLLKCSDNEKSSVRQRKKKMDKDG 357
+ EL ++ L A L E + F E + LLK D K ++ + +++
Sbjct: 325 EQELPLEKELPAALPTEIPGVGDLAFFKQEDVKYFGKLLKVEDEAKLTIAELRERKILRL 384
Query: 356 LVKMSSGVTEQLLSVSRQLAD 294
L+K+ +G S RQL D
Sbjct: 385 LLKVKNGTPPMRKSALRQLTD 405
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 5 LFHKFIIKCIHVLFQNYSHKRLKK 76
L FI CI + F+N +H+ L+K
Sbjct: 1598 LLDSFIEDCIRMFFENGNHQELRK 1621
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 5.4
Identities = 26/92 (28%), Positives = 42/92 (45%)
Frame = -2
Query: 488 KEFKDANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVS 309
KE ++ N + EK + + L S +V ++D +VK Q VS
Sbjct: 180 KEEREKIANELAHQEKQKERNKLLKSGRRNKAVLSFGDEVDMP-IVKKP---LRQKTPVS 235
Query: 308 RQLADTTQKSQNTLDNLVSSSSTVHGTQSELE 213
R TT+ S++ L+SSSS++H T S +
Sbjct: 236 RSSDTTTELSKD----LISSSSSIHSTYSSAQ 263
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 26.2 bits (55), Expect = 5.4
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -2
Query: 479 KDANINSMF--AIEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSR 306
+D+ +N F A+ A+ ++L C +N+ S K++ + +V M + LLSV
Sbjct: 615 QDSIVNGDFEKAVLSAKEMEVL-CENNDLS------KQLTSEEIVHMKLLIQLGLLSVKV 667
Query: 305 QLADTTQKSQNTLDNLVSS 249
+ D S T++NL+ S
Sbjct: 668 KNGDYENSSFETIENLIES 686
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -2
Query: 527 ELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNE-KSSVRQRKKKMDK 363
+LE +R L L + +A + ++F+ + ++ED LK S+NE ++ R+ K ++K
Sbjct: 385 KLEEERALHEEKLMKM-EAEMKTIFSQKVQEKEDRLKQSENELRTRHREMKAALEK 439
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = -2
Query: 335 VTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLXEEIRT 159
+T + LSV + TT + + ++ T GT + TAGT+T+++ E+ T
Sbjct: 190 ITSKYLSVGT-ITLTTISGSDLYTSTFPANGTTSGTVEVVIPTAGTVTETAVSGSELYT 247
>SPBC4F6.09 |str1||siderophore-iron transporter Str1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 377 KKMDKDGLVKMSSGVTEQLLSVSRQLADT 291
KK+D GL+ M++G+ LLS+S DT
Sbjct: 295 KKLDIIGLILMTAGLALVLLSISLASYDT 323
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -2
Query: 347 MSSGVTEQLLSVSRQLADTTQKSQ--NTLDNLVSSSSTVHGTQSELENTAGTITQSS 183
+SS + SVS + T + +T + +SSSS V + S +++ T+T SS
Sbjct: 178 LSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSS 234
>SPCC338.02 |mug112||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 125
Score = 25.8 bits (54), Expect = 7.2
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +1
Query: 58 SQTIKKASSVQCTGTPPKRIKMQKT*SLCP*ILYVRISSXSLLDCVIVPAVFSNSDCVPC 237
S+ K ++CT P KR K S P + ISS L D V+ P +F+ + C
Sbjct: 15 SKVFSKGKKLRCTCFP-KRKKEASERSCFPFLDTETISSCDLSDDVLSPKLFAKNS-YRC 72
Query: 238 TVELDETK 261
+ L ETK
Sbjct: 73 S--LKETK 78
>SPCC1235.10c |sec6||exocyst complex subunit
Sec6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 730
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +1
Query: 367 SIFFFLCRTDDFSLSLHFNKSSLCAFSIANILFILASLNSLRRQAKR 507
+I FF T ++ H N S + +++I++I+ S+ + R
Sbjct: 410 TIIFFQMITQQINIISHTNNSDVVGIVLSSIMYIMQSMQDQWKSVMR 456
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -2
Query: 491 LKEFKDANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDK 363
+KEF + MF + +RE+ +K +++Q+K + ++
Sbjct: 273 IKEFSKCDFTQMFHHFEQKREEKKSMPKEQKKAIKQKKDEEEE 315
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = -2
Query: 344 SSGVTEQLLSV---SRQLADTTQKSQNTLDNLVSSSSTV-HGTQSELENTAGTITQSSK 180
SS ++E + S+ S + + S +T L SSSST+ T+SE + + + + +SK
Sbjct: 962 SSTLSESISSINTNSLTVKPESSLSSSTTSGLTSSSSTIPSSTRSESNSESASTSSASK 1020
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.4 bits (53), Expect = 9.5
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Frame = -2
Query: 464 NSMFAIEKAQREDLLKCSDNEKSSVRQRKKK----------MDKDGLVK-MSSGVTE--Q 324
NS+ A K +E L KC+ NE+ S + K + KD L++ +S+ ++E
Sbjct: 274 NSLRAECKTLQEKLEKCAINEEDSKLLEELKHNVANYSDAIVHKDKLIEDLSTRISEFDN 333
Query: 323 LLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSK 180
L S L+ +K + L N + S + S+LE + +S++
Sbjct: 334 LKSERDTLSIKNEKLEKLLRNTIGSLKDSRTSNSQLEEEMVELKESNR 381
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 669 DILECRESMEKLNELNEKGRAKITEVREELENLYLY 562
+ ++ ES KLN++ EK + I+++ NL+LY
Sbjct: 280 ETIQSLESHYKLNQVGEKEYSTISDLCFSKGNLFLY 315
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,263,160
Number of Sequences: 5004
Number of extensions: 66290
Number of successful extensions: 270
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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