Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_E23
(798 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0200 - 26681968-26682181,26683269-26683383,26683495-266835... 40 0.002
02_05_0958 + 33073302-33073442,33073839-33073913,33074382-330744... 33 0.20
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 31 0.80
09_06_0269 - 21947847-21947904,21947988-21948169,21948268-219489... 31 1.1
04_01_0508 + 6647812-6647820,6647864-6648226,6649351-6650673,665... 30 2.5
02_01_0521 + 3768072-3768239,3768280-3768337,3769197-3769659,376... 29 3.2
12_01_1072 - 11106298-11106660,11109176-11109463,11109537-11110403 29 4.3
04_03_0250 - 13477020-13477550,13477572-13477933,13478026-134786... 29 4.3
05_01_0580 + 5210002-5210170,5210466-5210524,5210883-5211668,521... 29 5.7
03_01_0617 + 4532651-4532893,4534713-4534939,4535077-4535150,453... 29 5.7
11_03_0088 - 9780355-9780558,9780636-9780725,9783905-9784073,978... 28 7.5
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 28 7.5
08_02_0686 + 20047804-20048262,20049107-20049409 28 9.9
02_04_0597 - 24198112-24198462,24199249-24199389,24200322-242005... 28 9.9
02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916 28 9.9
>02_05_0200 -
26681968-26682181,26683269-26683383,26683495-26683531,
26683619-26683694,26683995-26684050,26684161-26684230,
26684320-26684624
Length = 290
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = -2
Query: 524 LESQRHLLACLLKEFKDANINSMFAIEKAQREDL-LKCSDNEKSSVRQRKKKMDKDGLVK 348
L+S + L ++AN+ + I+KA +E+ L E+S++R+R + K G+
Sbjct: 93 LQSWKEQYQKLRMRLRNANLQANANIKKAAQEERELLLGGGEESTIRRRNLQT-KAGMTS 151
Query: 347 MSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELE 213
+ +TE L + + ++S NTL S+S + + E +
Sbjct: 152 AAESITESLRRSRQLMVQEVERSANTLATFDESTSVLRKAEGEYQ 196
>02_05_0958 +
33073302-33073442,33073839-33073913,33074382-33074497,
33076863-33076977,33077100-33077228,33078907-33078954,
33079343-33079469,33079634-33079789,33080031-33080287,
33080431-33080580,33080660-33080714,33080793-33081088,
33081252-33081335,33081869-33081941,33082164-33082291,
33082905-33083090,33083179-33083316,33083394-33083519,
33083705-33083965
Length = 886
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -2
Query: 284 KSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLXEEIRT*RIYGQSDHVFCIFILFG 105
KSQ T+ + S+ + + SE+ N +GT TQ + L E R Y H +C+ +LF
Sbjct: 524 KSQ-TIQRMYSAKDSFVTSSSEISNLSGT-TQETALSPE-NVPRNYEAISHTYCLMLLFS 580
Query: 104 GVPVHCTE 81
C E
Sbjct: 581 EDKKSCLE 588
>12_02_0953 -
24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 31.5 bits (68), Expect = 0.80
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = -1
Query: 696 HFQVKAIIQDILECRESMEKLNELNEKGRAKITEVREELENLYLYGKE 553
+F++K Q++ CR ++ E N+K +I +++ EL N++ +E
Sbjct: 837 NFELKRTSQELETCRGELQACLEANKKLAREIADLQNELSNIHSSNRE 884
>09_06_0269 -
21947847-21947904,21947988-21948169,21948268-21948963,
21949378-21950021,21950441-21950543,21950618-21950812,
21951308-21951931
Length = 833
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = -2
Query: 449 IEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQ-- 276
IE+ R K D+ + + G +K S + +QL + R+ A+ Q
Sbjct: 465 IEQFPRAQKSKSIDSTVTDITSHGTHTCCLGAMKELSHIRKQLQEMERKQANIFDMLQEF 524
Query: 275 --NTLDNLVSSSSTVHGTQSELENTAGTITQS 186
N+++N+ S VH ++ ++ T TITQS
Sbjct: 525 MSNSVENMSVLSMKVHNLENAVDKTVYTITQS 556
>04_01_0508 +
6647812-6647820,6647864-6648226,6649351-6650673,
6653569-6653766,6654485-6654568,6655175-6655920,
6656480-6657341
Length = 1194
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = -2
Query: 452 AIE-KAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQ---LLSVSRQLADTTQ 285
AIE + + + L+ + + K D+ ++ + S +T+ LL +S Q + T
Sbjct: 486 AIEMEGKARERLQILSEATGVILDKLKHKDRLAIIPVQSSLTKHGASLLEMSDQGREQTF 545
Query: 284 KSQNTLDNLVSSSSTVHGTQSELENTAGTI 195
+ NLV+ ST H TQ+ E T+
Sbjct: 546 TKIQSFINLVARKSTKHATQTWREKLKNTV 575
>02_01_0521 +
3768072-3768239,3768280-3768337,3769197-3769659,
3769736-3769990,3770763-3770934,3772260-3772910,
3773659-3774045,3774123-3774155,3774239-3774307,
3774388-3774463,3775135-3775223,3775442-3775615,
3775693-3775821
Length = 907
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = -1
Query: 735 VVYQNFVKRLAKYHFQVKAIIQDILECRESMEKLNE 628
+ Q++ K L +FQ++A +QD LE + ME++N+
Sbjct: 634 IATQSYQKML---YFQIEAAVQDCLELLKEMERMND 666
>12_01_1072 - 11106298-11106660,11109176-11109463,11109537-11110403
Length = 505
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -2
Query: 500 ACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVK 348
A LL+ D +N ++ E R + + D+E + ++RK+ + K G V+
Sbjct: 11 ARLLQRQADGRVNRVYTGELPSRSNPSRAGDDEAGTSKKRKRAVAKGGQVR 61
>04_03_0250 -
13477020-13477550,13477572-13477933,13478026-13478682,
13480142-13480232
Length = 546
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 494 LLKEFKDANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVK 348
LL+ D +N +FA E R + D+E + R+RK+ + K G ++
Sbjct: 275 LLQRQADGRVNRVFAGELPSRLKPSQVGDDEAGTSRKRKRAIVKGGQIR 323
>05_01_0580 +
5210002-5210170,5210466-5210524,5210883-5211668,
5211898-5212737
Length = 617
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/82 (30%), Positives = 46/82 (56%)
Frame = -2
Query: 395 SVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSEL 216
S+++R+K ++ L S G+ EQ ++V R+L + Q NT+++ + + + QSE
Sbjct: 167 SLQEREKTLELQLLE--SYGLQEQDVAV-RELEN--QLKINTVESKLYTLK-IESLQSEN 220
Query: 215 ENTAGTITQSSKLXEEIRT*RI 150
E +T+SSKL E+ R+
Sbjct: 221 ERLQAQLTESSKLASELEAARM 242
>03_01_0617 +
4532651-4532893,4534713-4534939,4535077-4535150,
4535753-4535809,4535940-4536280,4536979-4537047,
4537152-4537219,4537404-4539569,4540101-4540178,
4540326-4540437,4540722-4540772,4540886-4540936
Length = 1178
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 446 EKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQ 324
EK + L +CS NE SSV K K + +S ++EQ
Sbjct: 624 EKGAKPKLKRCSANENSSVMSGSAKRAKADYLGTTSSLSEQ 664
>11_03_0088 -
9780355-9780558,9780636-9780725,9783905-9784073,
9784230-9784638,9784725-9785562
Length = 569
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -2
Query: 500 ACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVK 348
A LL+ D +N ++ E R + + D+E + ++RK+ + K G V+
Sbjct: 303 ARLLQRQADGRMNHVYTGELPSRSNPSRAGDDEAGTSKKRKRAVAKGGQVR 353
>04_04_1630 - 34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 545 DTKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQR 432
+ K D + E+ R LL KE + A +NS EKAQR
Sbjct: 1436 EEKGDDDAENLRDLLQKARKELEVARLNSTMFEEKAQR 1473
>08_02_0686 + 20047804-20048262,20049107-20049409
Length = 253
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = -1
Query: 621 EKGRAKITEVREELEN 574
++GRA++ EVR+ELEN
Sbjct: 141 DRGRAQVVEVRDELEN 156
>02_04_0597 - 24198112-24198462,24199249-24199389,24200322-24200537,
24200626-24201561,24201655-24201816,24202026-24202304,
24202399-24203171,24206142-24207363
Length = 1359
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 413 SDNEKSSVRQRKK-KMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTV 237
+++E ++ R + K +KD V+ ++EQ+L + QL + + L + +
Sbjct: 1114 TESEAANAHLRSELKAEKDRFVREKKELSEQMLEMENQLEWVRSEKDEQIVKLTADKKNL 1173
Query: 236 HGTQSELE 213
H E E
Sbjct: 1174 HDRLHEAE 1181
>02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916
Length = 722
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -2
Query: 542 TKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDK 363
TK + E+ S R L L+ +D + EK + + L DN + K +
Sbjct: 549 TKSEEEIMSMRTRLGKALETARDMENRNAQLEEKVRELEALMDKDNNYRGGKDTKAYKEN 608
Query: 362 DGL---VKMSSG 336
DGL VK SSG
Sbjct: 609 DGLHLHVKESSG 620
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,380,196
Number of Sequences: 37544
Number of extensions: 366447
Number of successful extensions: 989
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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