Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_E23
(798 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 31 0.054
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 28 0.29
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 27 0.89
Z49815-1|CAA89969.1| 237|Anopheles gambiae serine proteinase pr... 26 1.6
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 26 1.6
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 2.7
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 25 3.6
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 25 3.6
AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid transpo... 24 4.7
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 24 6.3
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 30.7 bits (66), Expect = 0.054
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = -2
Query: 392 VRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELE 213
+R ++ +D++G S+ +QL S S + Q S ++L + S SST +GT SE
Sbjct: 160 IRSLQRMLDENGGELPSNKQQQQLTSAS----SSNQLSNSSLCSASSGSSTYYGTMSEPS 215
Query: 212 NTA 204
N +
Sbjct: 216 NAS 218
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 28.3 bits (60), Expect = 0.29
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = -2
Query: 446 EKAQREDLLKCSDNEKSSVRQRKKKMD--KDGLVKMSSGVTEQLLSVSRQLADTTQKSQN 273
E+ +D L N+K+ + + KK++ K+ +K + + + + L + +
Sbjct: 409 EQKSDQDRLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAE 468
Query: 272 TLDNLVSSSSTVHGTQSELEN 210
++ +S +H QSEL+N
Sbjct: 469 LSQDVGTSKERIHELQSELDN 489
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 26.6 bits (56), Expect = 0.89
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 741 PDVVYQNFVKRLAKYHFQVKAIIQDILECRESMEK 637
PD VY + K+L H Q+ A +LE + K
Sbjct: 478 PDFVYNFWYKKLITIHEQIAACFNTVLEDSRKLPK 512
>Z49815-1|CAA89969.1| 237|Anopheles gambiae serine proteinase
protein.
Length = 237
Score = 25.8 bits (54), Expect = 1.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 733 GLSEFREEIG*VSFSSQSNYPGYPGM 656
G S FRE +G VS+ P YPG+
Sbjct: 186 GDSNFRELVGIVSWGEGCARPNYPGV 211
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 25.8 bits (54), Expect = 1.6
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 669 DILECRES-MEKLNELNEKGRAKITEVREELENLYLYGKEXRGYKI 535
+I +CR +E ++N RAK +E RE+L LY+ + KI
Sbjct: 277 EIAQCRSHCIEARRKMN---RAKSSEQREDLRRLYILARSNLKRKI 319
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 25.0 bits (52), Expect = 2.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 712 EIG*VSFSSQSNYPGYPGMQGIDG 641
E G S Q+ PG PG++G DG
Sbjct: 306 EPGAASEKGQNGEPGVPGLRGNDG 329
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 24.6 bits (51), Expect = 3.6
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = -2
Query: 389 RQRKKKMDKDGLVKMSSGVTEQLLSVS---RQLADTTQKSQNTLDNLVSSSSTVHGTQSE 219
+Q+K+K K L+++S G E SVS R+ D + D ++ T ++
Sbjct: 376 QQQKRKRPKPELIEISPGQNETFESVSLKIRKAVDDNGTHKELKDFIIMGRRT---DKAL 432
Query: 218 LENTAGTITQSSKLXEEIRT 159
L T ++ + ++IRT
Sbjct: 433 LRLTLARSANATLILQQIRT 452
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 24.6 bits (51), Expect = 3.6
Identities = 18/102 (17%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Frame = -2
Query: 479 KDANINSMFAIEKAQREDLLKCSDNEKSSVRQR----KKKMDK-DGLVKMSSGVTEQLLS 315
+DA + ++K +++ + D + + R R K +D +++ + L++
Sbjct: 1034 RDAPYKRLVLVDKKRQKKYKRNLDELRQATRLRVDAKSKSLDSCSDILQEVPNLNRDLIN 1093
Query: 314 VSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQ 189
+ RQ+ ++ S+N + S G L+ G +T+
Sbjct: 1094 LFRQMPKVSELSENETEYSSSDQLMGGGKPGPLKEVNGVVTR 1135
>AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid
transporter Ag_AAT8 protein.
Length = 636
Score = 24.2 bits (50), Expect = 4.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 251 MKPNYPKYFDSFVWCPLAACLRKVIALSHLMTF*PIHPYPSFSFF 385
+KP + K +D VWC AA + +LS + F I Y S++ F
Sbjct: 314 LKPQWDKIYDPKVWC--AAVTQCFFSLS--ICFGNIIMYSSYNKF 354
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.8 bits (49), Expect = 6.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 676 YPGYPGMQGIDGE 638
YPG PG +G+ GE
Sbjct: 484 YPGQPGPEGLRGE 496
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,577
Number of Sequences: 2352
Number of extensions: 16648
Number of successful extensions: 49
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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