Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_E23
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68315-2|CAA92668.1| 535|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 36 0.044
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 36 0.044
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 36 0.044
U13019-7|AAC24445.2| 689|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical p... 33 0.31
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 32 0.55
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr... 32 0.55
AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical ... 31 0.96
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF068716-1|AAC17747.1| 247|Caenorhabditis elegans Hypothetical ... 31 1.3
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 30 1.7
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 30 1.7
Z69383-10|CAM06587.1| 222|Caenorhabditis elegans Hypothetical p... 29 3.9
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 29 3.9
U61949-8|AAU05569.1| 332|Caenorhabditis elegans Hypothetical pr... 29 3.9
U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 29 3.9
U21317-1|AAA62524.2| 627|Caenorhabditis elegans Na/h exchanger ... 29 5.1
AF497824-1|AAM18102.1| 644|Caenorhabditis elegans putative Na-H... 29 5.1
AF016677-7|AAB66144.1| 292|Caenorhabditis elegans Hypothetical ... 29 5.1
AF016670-9|AAB66107.2| 701|Caenorhabditis elegans Hypothetical ... 29 5.1
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 29 5.1
Z81130-5|CAB03420.1| 361|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 28 6.7
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 28 6.7
Z82268-2|CAD89737.1| 389|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z82268-1|CAB05197.3| 508|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z37139-4|CAA85488.1| 231|Caenorhabditis elegans Hypothetical pr... 28 8.9
U55366-1|AAA97980.2| 430|Caenorhabditis elegans Suppressor of c... 28 8.9
AF419335-1|AAL15971.1| 430|Caenorhabditis elegans multisubstrat... 28 8.9
>Z68315-2|CAA92668.1| 535|Caenorhabditis elegans Hypothetical
protein F28C6.2 protein.
Length = 535
Score = 35.9 bits (79), Expect = 0.034
Identities = 25/85 (29%), Positives = 41/85 (48%)
Frame = -2
Query: 389 RQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELEN 210
RQRK L + ++ + L S+S + +Q L+ L+SS + + L+N
Sbjct: 304 RQRKVTCFSPFLEEEATALARDLDSISEEFLPINIIAQEMLEKLMSSGNNLDVCHRMLKN 363
Query: 209 TAGTITQSSKLXEEIRT*RIYGQSD 135
T TIT+ K E+R +I GQ +
Sbjct: 364 TTATITRVIKTL-EVRQPKITGQEE 387
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 35.5 bits (78), Expect = 0.044
Identities = 27/135 (20%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Frame = -2
Query: 560 VKKXGD--TKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSSVR 387
+K+ G+ + + E+E +R + KDA +NS +E ++E S++ + VR
Sbjct: 581 IKRKGERFVEMEKEMEEERQKATDRTLKLKDALVNSEKNLETIKKE-----SEDREKIVR 635
Query: 386 QRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENT 207
++ ++++ +++ ++L + ++++ ++ S +TV +SEL
Sbjct: 636 EKDAHLEEN---------KKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSEL 686
Query: 206 AGTITQSSKLXEEIR 162
G +T+S+ EE++
Sbjct: 687 KGKLTESNSFIEELK 701
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 35.5 bits (78), Expect = 0.044
Identities = 27/135 (20%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Frame = -2
Query: 560 VKKXGD--TKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSSVR 387
+K+ G+ + + E+E +R + KDA +NS +E ++E S++ + VR
Sbjct: 583 IKRKGERFVEMEKEMEEERQKATDRTLKLKDALVNSEKNLETIKKE-----SEDREKIVR 637
Query: 386 QRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENT 207
++ ++++ +++ ++L + ++++ ++ S +TV +SEL
Sbjct: 638 EKDAHLEEN---------KKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSEL 688
Query: 206 AGTITQSSKLXEEIR 162
G +T+S+ EE++
Sbjct: 689 KGKLTESNSFIEELK 703
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 35.5 bits (78), Expect = 0.044
Identities = 27/135 (20%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Frame = -2
Query: 560 VKKXGD--TKYDTELESQRHLLACLLKEFKDANINSMFAIEKAQREDLLKCSDNEKSSVR 387
+K+ G+ + + E+E +R + KDA +NS +E ++E S++ + VR
Sbjct: 583 IKRKGERFVEMEKEMEEERQKATDRTLKLKDALVNSEKNLETIKKE-----SEDREKIVR 637
Query: 386 QRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELENT 207
++ ++++ +++ ++L + ++++ ++ S +TV +SEL
Sbjct: 638 EKDAHLEEN---------KKRIEDAVQKLEEAEKRARELEASVSSRDTTVSTKESELSEL 688
Query: 206 AGTITQSSKLXEEIR 162
G +T+S+ EE++
Sbjct: 689 KGKLTESNSFIEELK 703
>U13019-7|AAC24445.2| 689|Caenorhabditis elegans Hypothetical
protein T12A2.6 protein.
Length = 689
Score = 33.1 bits (72), Expect = 0.24
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -1
Query: 795 GFESXGPISSIVVAKLENPDVVYQNFVKRLAKYHFQVK 682
GF P +SI++++L PD+VYQ ++ +++K
Sbjct: 78 GFSKSLPFNSIILSQLSIPDIVYQQLIRAFELTRWEIK 115
>Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical
protein B0464.5a protein.
Length = 1003
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/91 (23%), Positives = 46/91 (50%)
Frame = -2
Query: 476 DANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLA 297
DA S+ ++ + ++ + + + +S K +KD LV + + L V + A
Sbjct: 218 DATEESIDSVSSIESQEAEESATEDLASCHSNDDKNEKDVLVDEDTSKYDNL-PVEMRSA 276
Query: 296 DTTQKSQNTLDNLVSSSSTVHGTQSELENTA 204
++S+ T+D+ VSSS++ T + +++A
Sbjct: 277 KEGEESEGTIDSSVSSSTSSSSTGDDGDDSA 307
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/68 (30%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Frame = -2
Query: 452 AIEKAQREDLLKCSD----NEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQ 285
A++KA+ E++++ D N KS+V + KK ++K+ K+ +T++L ++ L +TT
Sbjct: 305 ALQKAE-EEVVQTIDQTVKNIKSNVNEVKKDVEKNIAEKVDD-ITKELEKSAKSLEETTD 362
Query: 284 KSQNTLDN 261
K + +DN
Sbjct: 363 KIGSKIDN 370
>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
protein C27A2.1 protein.
Length = 1076
Score = 31.9 bits (69), Expect = 0.55
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = -2
Query: 557 KKXGDTKYDTELESQRHLLACLLKEFKDAN-INSMFAIEKAQREDLLKCSDNEKSSVRQR 381
KK TK+ TEL S+ L L E D + I +A +++ +L+ ++S+R
Sbjct: 671 KKQVHTKWKTELASEMAKLEALENEVVDISAIEEEYA--NVEKKAILETKKMLENSIRWH 728
Query: 380 KKKMDKD---GLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNL 258
K+ +DK G+ ++S + + ++ S A+T + L ++
Sbjct: 729 KEIIDKHRLIGIFELSESICKSRVNKSNSEAETHRSKLEDLKSV 772
>AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical
protein F19B10.4 protein.
Length = 464
Score = 31.1 bits (67), Expect = 0.96
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -1
Query: 738 DVVYQNFVKRLAKYHFQVKAIIQDILECRESMEKLNELNEKGR-AKITEVREELENL 571
D + NF K +Y + + + + + E R+++E+ N N+ K+ E+REEL+NL
Sbjct: 253 DEMKMNFKKFTREYEKEKRELEKQMDEQRQTLEQDNARNQSEYDMKMREMREELQNL 309
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = -2
Query: 431 EDLLKCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQK 282
EDL+K D+++ + ++ KMD + ++K V ++ SV +++ D ++
Sbjct: 192 EDLIKWMDDKEKEICEKYSKMDFEVMMKYRKTVEIEMKSVEQRIKDLKEQ 241
>AF068716-1|AAC17747.1| 247|Caenorhabditis elegans Hypothetical
protein F26D11.4 protein.
Length = 247
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = -2
Query: 467 INSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTT 288
+NS ++ A +ED+ K +NEK + K +D V +S + Q A
Sbjct: 79 LNSFIDVKDATQEDIKKYEENEKDGICMLHKNLDLHPYVLLSGHRNRECNQPIIQFASLD 138
Query: 287 QKSQN 273
+K +N
Sbjct: 139 KKCKN 143
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 485 EFKDANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDKD 360
+F D ++S A+EK + +D K S+ E S+ Q+K + DKD
Sbjct: 565 DFMDLLVDSDEALEKVELKDQ-KVSEQETSAKDQKKSEADKD 605
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/40 (35%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = -1
Query: 687 VKAIIQDILECRESMEK-LNELNEKGRAKITEVREELENL 571
VK++ ++LE ++S++K L ++ E + + +++EELENL
Sbjct: 35 VKSLCAELLEEQKSLKKRLQKVEENQKIENAKIKEELENL 74
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 485 EFKDANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDKD 360
+F D ++S A+EK + +D K S+ E S+ Q+K + DKD
Sbjct: 565 DFMDLLVDSDEALEKVELKDQ-KVSEQETSAKDQKKSEADKD 605
>Z69383-10|CAM06587.1| 222|Caenorhabditis elegans Hypothetical
protein F13E9.14 protein.
Length = 222
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -2
Query: 344 SSGVTEQLLSVSRQL-ADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLXEE 168
++GV+EQ + + A + QN L + SS ++ ++ LEN T+ + EE
Sbjct: 113 TNGVSEQYSEFTANVTAKLEELKQNVTSVLTNLSSVLNSLETILENEDQTVAAQKQAIEE 172
Query: 167 IR 162
+R
Sbjct: 173 LR 174
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Frame = -2
Query: 488 KEFKDANINSMFAIEKAQREDLLKCSDNE----KSSVRQRKKKMDKDGLVKMSSGVTEQL 321
KEFK+ + N++ + K+++ + +NE K +R K +M K L++ L
Sbjct: 296 KEFKEYHRNNLLKMAKSRKAVMTYHQNNERERKKDEIRNEKLRMQK--LMQEDEEGYRAL 353
Query: 320 LSVSR--QLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLXEEIR 162
L + +L Q++ +D+L S T+ + + I + +++ EE R
Sbjct: 354 LDEKKDQRLVYLLQQTDEYVDSLCSLVRQHQNTEKKKKKEDKKIEKGNQMDEEAR 408
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Frame = -2
Query: 488 KEFKDANINSMFAIEKAQREDLLKCSDNE----KSSVRQRKKKMDKDGLVKMSSGVTEQL 321
KEFK+ + N++ + K+++ + +NE K +R K +M K L++ L
Sbjct: 296 KEFKEYHRNNLLKMAKSRKAVMTYHQNNERERKKDEIRNEKLRMQK--LMQEDEEGYRAL 353
Query: 320 LSVSR--QLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLXEEIR 162
L + +L Q++ +D+L S T+ + + I + +++ EE R
Sbjct: 354 LDEKKDQRLVYLLQQTDEYVDSLCSLVRQHQNTEKKKKKEDKKIEKGNQMDEEAR 408
>U61949-8|AAU05569.1| 332|Caenorhabditis elegans Hypothetical
protein F49E8.7b protein.
Length = 332
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = -2
Query: 482 FKDANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQ 303
F++ I S F A + D CSD+EK + Q K K + K++ + + L++ S +
Sbjct: 36 FQELAIASFFLENTAHKLDY-SCSDDEKKFLDQIKMKFGTTKVDKLTMVLPDILMAYSEE 94
Query: 302 LAD 294
L +
Sbjct: 95 LVE 97
>U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical
protein F49E8.7a protein.
Length = 510
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = -2
Query: 482 FKDANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQ 303
F++ I S F A + D CSD+EK + Q K K + K++ + + L++ S +
Sbjct: 214 FQELAIASFFLENTAHKLDY-SCSDDEKKFLDQIKMKFGTTKVDKLTMVLPDILMAYSEE 272
Query: 302 LAD 294
L +
Sbjct: 273 LVE 275
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Frame = -2
Query: 488 KEFKDANINSMFAIEKAQREDLLKCSDNE----KSSVRQRKKKMDKDGLVKMSSGVTEQL 321
KEFK+ + N++ + K+++ + +NE K +R K +M K L++ L
Sbjct: 296 KEFKEYHRNNLLKMAKSRKAVMTYHQNNERERKKDEIRNEKLRMQK--LMQEDEEGYRAL 353
Query: 320 LSVSR--QLADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLXEEIR 162
L + +L Q++ +D+L S T+ + + I + +++ EE R
Sbjct: 354 LDEKKDQRLVYLLQQTDEYVDSLCSLVRQHQNTEKKKKKEDKKIEKGNQMDEEAR 408
>U21317-1|AAA62524.2| 627|Caenorhabditis elegans Na/h exchanger
protein 2 protein.
Length = 627
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = -2
Query: 392 VRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELE 213
VR+ K +D+D K++ G + ++ L + T+ NT+ + VSS+S + T+ E
Sbjct: 511 VRKYKHLVDEDAK-KIARGDLNSNMVFTKALIEHTRSRTNTMIDGVSSTSKIDFTKHMKE 569
Query: 212 NTAGTI 195
N T+
Sbjct: 570 NFGVTV 575
>AF497824-1|AAM18102.1| 644|Caenorhabditis elegans putative Na-H
exchanger isoform 2 protein.
Length = 644
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = -2
Query: 392 VRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQNTLDNLVSSSSTVHGTQSELE 213
VR+ K +D+D K++ G + ++ L + T+ NT+ + VSS+S + T+ E
Sbjct: 528 VRKYKHLVDEDAK-KIARGDLNSNMVFTKALIEHTRSRTNTMIDGVSSTSKIDFTKHMKE 586
Query: 212 NTAGTI 195
N T+
Sbjct: 587 NFGVTV 592
>AF016677-7|AAB66144.1| 292|Caenorhabditis elegans Hypothetical
protein ZK1240.8 protein.
Length = 292
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 675 IQDILECRESMEKLNELNEKGRAKITEVREELENLYLY 562
I+D+LECR KLN E ++ E RE + N L+
Sbjct: 138 IRDVLECRLKQMKLNA--ESFTVQLEEFREAMSNRQLF 173
>AF016670-9|AAB66107.2| 701|Caenorhabditis elegans Hypothetical
protein K02F6.9 protein.
Length = 701
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = -1
Query: 753 KLENPDVVYQNFVKRLAKYH--FQVKAIIQDILECRESM-EKLNELNEK-GRAKITEVRE 586
K+EN V+ + FVK A+Y F ++ LE RE + KLN ++ K G + TE +
Sbjct: 384 KIENLKVIEEMFVKIKAEYEQIFTENEYLE--LEIREFLIRKLNAIDGKFGLDQYTEGKP 441
Query: 585 ELENLY 568
LE +Y
Sbjct: 442 LLEKMY 447
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 28.7 bits (61), Expect = 5.1
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = -2
Query: 452 AIEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLADTTQKSQN 273
AIE Q E+ S E+ R R+K+ D + SS VT LA T S+N
Sbjct: 244 AIEDTQSEESSADSSEERERARSRRKRKD-----EASSAVTSD-EEDQEDLA--TTDSEN 295
Query: 272 TLDNLVSSSSTVHGT-QSELENTAGTITQSSKLXEEIR 162
+ N SS++ + T Q +LE A + +L EE R
Sbjct: 296 PVINGASSAAALSKTLQRKLEKQA-MKREKQRLKEEER 332
>Z81130-5|CAB03420.1| 361|Caenorhabditis elegans Hypothetical
protein T23G11.7a protein.
Length = 361
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = -1
Query: 678 IIQDILECRESMEKLNELNEK---GRAKITEVREEL 580
I Q + C + EK+ ++N+K G+ K++EV EEL
Sbjct: 95 IEQKNVSCEKLREKIAKINQKILIGKGKLSEVNEEL 130
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 712 EIG*VSFSSQSNYPGYPGMQGIDGE 638
E G F PGYPG QG +GE
Sbjct: 881 ECGEDGFPGSPGQPGYPGQQGREGE 905
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 712 EIG*VSFSSQSNYPGYPGMQGIDGE 638
E G F PGYPG QG +GE
Sbjct: 1138 ECGEDGFPGSPGQPGYPGQQGREGE 1162
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 712 EIG*VSFSSQSNYPGYPGMQGIDGE 638
E G F PGYPG QG +GE
Sbjct: 1137 ECGEDGFPGSPGQPGYPGQQGREGE 1161
>Z82268-2|CAD89737.1| 389|Caenorhabditis elegans Hypothetical
protein F52B11.1b protein.
Length = 389
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -2
Query: 302 LADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLXEEI 165
+ D+ Q S SSS++ HG + + +T+ + + SSK +E+
Sbjct: 323 IIDSEQMSLFNKSQSTSSSASAHGATTPISSTSSSSSSSSKNDDEM 368
>Z82268-1|CAB05197.3| 508|Caenorhabditis elegans Hypothetical
protein F52B11.1a protein.
Length = 508
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -2
Query: 302 LADTTQKSQNTLDNLVSSSSTVHGTQSELENTAGTITQSSKLXEEI 165
+ D+ Q S SSS++ HG + + +T+ + + SSK +E+
Sbjct: 442 IIDSEQMSLFNKSQSTSSSASAHGATTPISSTSSSSSSSSKNDDEM 487
>Z37139-4|CAA85488.1| 231|Caenorhabditis elegans Hypothetical
protein C14B1.8 protein.
Length = 231
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/82 (26%), Positives = 44/82 (53%)
Frame = -2
Query: 473 ANINSMFAIEKAQREDLLKCSDNEKSSVRQRKKKMDKDGLVKMSSGVTEQLLSVSRQLAD 294
+ I+SM+ EK LL+ D + +V ++K+ + L + + + L +RQL +
Sbjct: 41 SRISSMYKYEK-----LLQ--DMQDLTVNGNRRKLILNDLQRENKQIMA-LQDENRQLRE 92
Query: 293 TTQKSQNTLDNLVSSSSTVHGT 228
TTQ+ T+ N++ S + + G+
Sbjct: 93 TTQEYLATMRNILDSHAEIEGS 114
>U55366-1|AAA97980.2| 430|Caenorhabditis elegans Suppressor of clr
protein 1 protein.
Length = 430
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -3
Query: 289 HKRVKILWIIWFHLVLQCMEHNRNWKIQQERLRNRANXLKKYGRREFTDKV 137
+K K W+ + VL C + RN E +R N LKK + EF +V
Sbjct: 20 YKLFKTKWVEHY-FVLHCRDRERNLFAIDEFKTSRKNDLKKRFKLEFVIRV 69
>AF419335-1|AAL15971.1| 430|Caenorhabditis elegans multisubstrate
adaptor proteinSOC-1 protein.
Length = 430
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -3
Query: 289 HKRVKILWIIWFHLVLQCMEHNRNWKIQQERLRNRANXLKKYGRREFTDKV 137
+K K W+ + VL C + RN E +R N LKK + EF +V
Sbjct: 20 YKLFKTKWVEHY-FVLHCRDRERNLFAIDEFKTSRKNDLKKRFKLEFVIRV 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,892,984
Number of Sequences: 27780
Number of extensions: 368960
Number of successful extensions: 1873
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1850
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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