Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_E13
(720 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 291 9e-78
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 232 7e-60
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 189 5e-47
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 166 6e-40
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 143 3e-33
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 131 1e-29
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 130 3e-29
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 129 6e-29
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 123 5e-27
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 116 4e-25
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 112 1e-23
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 111 1e-23
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 111 2e-23
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 103 4e-21
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 92 1e-17
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 91 2e-17
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 89 1e-16
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 83 5e-15
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 66 1e-09
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 64 3e-09
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 63 8e-09
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 58 2e-07
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 58 2e-07
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 58 3e-07
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 52 1e-05
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 52 2e-05
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 49 1e-04
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 48 2e-04
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 48 3e-04
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 46 0.001
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 46 0.001
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 46 0.001
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 42 0.015
UniRef50_Q5AGI4 Cluster: Putative uncharacterized protein; n=2; ... 40 0.062
UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Re... 38 0.33
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 38 0.33
UniRef50_A6GVL2 Cluster: Putative cell surface protein SprD; n=1... 37 0.58
UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila pseudoobscu... 37 0.58
UniRef50_A6SNX0 Cluster: Predicted protein; n=1; Botryotinia fuc... 37 0.58
UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_Q9C5C0 Cluster: Mitogen-activated protein kinase 18; n=... 35 1.8
UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 1... 35 1.8
UniRef50_UPI000150A5BE Cluster: hypothetical protein TTHERM_0006... 35 2.3
UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_Q6NE17 Cluster: Putative erythrocyte-binding protein MA... 34 3.1
UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr prote... 34 4.1
UniRef50_Q4SP98 Cluster: Chromosome 15 SCAF14542, whole genome s... 33 5.4
UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_A2G612 Cluster: SNF7 family protein; n=2; Trichomonas v... 33 7.1
UniRef50_Q9PQ05 Cluster: Unique hypothetical membrane lipoprotei... 33 9.4
UniRef50_Q1MQI5 Cluster: Outer membrane protein; n=1; Lawsonia i... 33 9.4
UniRef50_Q23MI1 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
UniRef50_A3LNR4 Cluster: Predicted protein; n=5; Saccharomycetal... 33 9.4
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 291 bits (715), Expect = 9e-78
Identities = 139/191 (72%), Positives = 162/191 (84%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
GKGKMRNRRR+ RKGPLI +NKDQG TR+FRNIPGV+ LAPGGH+GRF+I
Sbjct: 57 GKGKMRNRRRLHRKGPLIIYNKDQGLTRSFRNIPGVDMVNVNKLNLLHLAPGGHVGRFMI 116
Query: 535 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR 356
WTQSAF RLD +FGSWKTPSK+KKNFNLPQPKMANTDL+RLLKS+EIR+VLRAP KRV+R
Sbjct: 117 WTQSAFERLDAIFGSWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRRVLRAPIKRVVR 176
Query: 355 ATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKA 176
ATRKLNPLTN KAMLKLNPYAAVLK+KA+L+ +RKN +AL AEK G+KL +PA+KA
Sbjct: 177 ATRKLNPLTNTKAMLKLNPYAAVLKKKAVLDQVKRKNKRALEVAEKRGIKLPDDDPAVKA 236
Query: 175 EKLRERRRKNI 143
KL+E+R K+I
Sbjct: 237 LKLKEKRAKSI 247
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 232 bits (567), Expect = 7e-60
Identities = 111/189 (58%), Positives = 139/189 (73%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
G+G MR+RRRI R+GPL+ ++KD+G +AFRNIPG+E LAPGGH+GRFVI
Sbjct: 195 GRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVI 254
Query: 535 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR 356
WT+SAF RL+ LFG+WK PS KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R
Sbjct: 255 WTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFR 314
Query: 355 ATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKA 176
+ R+LNPLTN + ++KLNPYA VLKR+A L +R K LA A+K ++L+K + A A
Sbjct: 315 SVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQNVELAKSHFANVA 374
Query: 175 EKLRERRRK 149
K R K
Sbjct: 375 TKAAANRAK 383
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 189 bits (461), Expect = 5e-47
Identities = 93/183 (50%), Positives = 118/183 (64%), Gaps = 1/183 (0%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
GKGKMRNRRRIQR+GP I +N+D G +AFRNIPG+ LAPGGH+GRF I
Sbjct: 192 GKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCI 251
Query: 535 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR 356
WT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R
Sbjct: 252 WTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHR 311
Query: 355 ATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMK 179
K NPL N + MLKLNPYA ++R IL R L+ A A + L+ A
Sbjct: 312 RVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAAV 371
Query: 178 AEK 170
A K
Sbjct: 372 AGK 374
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 166 bits (403), Expect = 6e-40
Identities = 88/172 (51%), Positives = 111/172 (64%), Gaps = 3/172 (1%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
GKGKMRNRR +QR+GPL+ +++D G TRAFRNIPGVE LAPGGH+GRF+I
Sbjct: 195 GKGKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELCSVDRLGLLTLAPGGHVGRFII 254
Query: 535 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR 356
WT+SAF +LD +FG+ + S KK + P MA TDLTRL+ SDEI+ L AP IR
Sbjct: 255 WTKSAFEKLDSIFGTSTSKSASKKGWKPPTNIMAQTDLTRLINSDEIQSALNAPKLGAIR 314
Query: 355 --ATRKLNPLTNNKAMLKLNPYAAVLKR-KAILELRRRKNLKALADAEKSGL 209
A K NPL N AM KLNPYA V + +A + R K A ++A +S +
Sbjct: 315 AHAPLKRNPLKNKSAMDKLNPYAKVAREMQARAQEERSKAKAAKSNAARSAV 366
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 143 bits (347), Expect = 3e-33
Identities = 74/157 (47%), Positives = 99/157 (63%), Gaps = 8/157 (5%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGX---TRAFRNIPGVEXXXXXXXXXXXLAPGGHLGR 545
GKGK+R RR QR+GPL+ +N D+ +AFRNIPGVE LAPGGHLGR
Sbjct: 171 GKGKLRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIPGVETSSVYSMNLLQLAPGGHLGR 230
Query: 544 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLR----- 380
F++WT SAFG LD ++GS PS KK+F LP M DL++++ S +I+KVLR
Sbjct: 231 FIVWTSSAFGALDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKIINSSDIQKVLRPVRGG 290
Query: 379 APNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 269
A +KR + +K NPL N + L+LNPYAA ++ +
Sbjct: 291 AVSKRGV--VQKKNPLKNFQVQLRLNPYAATFSKEKL 325
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 131 bits (317), Expect = 1e-29
Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 6/155 (3%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFN---KDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGR 545
GKGK+R RR QR+GPL+ ++ + RAFRN+PGVE LAPGGHLGR
Sbjct: 194 GKGKLRGRRHRQRRGPLVVYDGATDGKELVRAFRNLPGVETCDVYSLNLLQLAPGGHLGR 253
Query: 544 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 365
F+IW+ SAF LD ++G+ PS KK+F LP ++ D+ RL+ S E++ V+RA
Sbjct: 254 FIIWSSSAFKALDNIYGTTTAPSALKKDFLLPSNVVSQADIGRLINSSELQSVIRAAKGS 313
Query: 364 VI--RA-TRKLNPLTNNKAMLKLNPYAAVLKRKAI 269
+ RA +K NPL N + +L+LNPYAA ++ I
Sbjct: 314 ALTKRAGVQKKNPLLNKQVLLRLNPYAAGYSKEKI 348
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 130 bits (314), Expect = 3e-29
Identities = 74/181 (40%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIX-FNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFV 539
G K R ++ RKGPL+ FN++ +AFRN+PGVE LAPGG LGRFV
Sbjct: 193 GISKQRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFV 252
Query: 538 IWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRV 362
IWTQSAF LD LFG+++ S K + L +P + N DL R++ S++++ KV A +V
Sbjct: 253 IWTQSAFAHLDKLFGTYRYASVLKDGYQLLRPLLTNPDLARIINSNQVQEKVQPAKTTKV 312
Query: 361 IRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAM 182
+ +K NPL N KAM +LNPYA + A+ ++ A G K K+N A+
Sbjct: 313 LHDVQKKNPLKNTKAMDRLNPYAKKQRAAAVAAIK----------ANTKGTKKIKKNKAL 362
Query: 181 K 179
K
Sbjct: 363 K 363
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 129 bits (312), Expect = 6e-29
Identities = 74/183 (40%), Positives = 104/183 (56%), Gaps = 2/183 (1%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIX-FNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFV 539
G K R ++ RKGPL+ FN++ +AFRN+PGVE LAPGG LGRFV
Sbjct: 39 GVSKSRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFV 98
Query: 538 IWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRV 362
IWTQSAF LD LFG+++ S K + L +P + N DL R++ S++++ KV A V
Sbjct: 99 IWTQSAFANLDKLFGTYRYSSILKDGYQLLRPLLTNPDLARIINSNQVQEKVQAAKQTTV 158
Query: 361 IRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAM 182
+ +K NPL N+KA+ +LNPYA ++R A A +G K K+N A+
Sbjct: 159 LHEVQKKNPLKNSKALDRLNPYAK----------KQRAAATAAVKAHTTGTKKIKKNKAL 208
Query: 181 KAE 173
K +
Sbjct: 209 KKQ 211
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 123 bits (296), Expect = 5e-27
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 2/176 (1%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXF-NKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFV 539
G+GKMR R+ +RKGPL+ + N D +AFRNIPGV+ LAPG H+GRF+
Sbjct: 193 GQGKMRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHIGRFI 252
Query: 538 IWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI 359
IWT+SAF +L+ +FG+ K ++ K F + +MA D+ R++ + E K+LRA K V+
Sbjct: 253 IWTESAFKKLNTIFGTQKKMAQGKSGFRIAHAQMAVPDMKRVVVAAEKAKLLRA--KIVL 310
Query: 358 -RATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKR 194
+ ++ NPL N AM+KLNPYA + K + + KA A+ + +K+
Sbjct: 311 PKVPKRANPLKNWAAMVKLNPYAKIASHKLAQVAKAQAAHKAQYAAKMEKILAAKK 366
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 116 bits (280), Expect = 4e-25
Identities = 68/186 (36%), Positives = 97/186 (52%), Gaps = 5/186 (2%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
GKGKMRNRRR+ GPL+ + +D G +A RNI GV+ LAPGG GR I
Sbjct: 195 GKGKMRNRRRVCAVGPLVVYAEDNGIVKAMRNIKGVDTCSVERLNLLRLAPGGTFGRLTI 254
Query: 535 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPN----- 371
+T+ A RL ++GS+ S K + LP+P M N D+TR++ S E++ VLR
Sbjct: 255 FTKGAIKRLQEIYGSYTHGSSSKVGYTLPRPAMTNADITRIINSTEVQSVLRPLRGFRCM 314
Query: 370 KRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRN 191
+ R+ K N LTN LNP L++ A L L A+ +K+ + K++
Sbjct: 315 GSMGRSKTKKNNLTNLTKRACLNPAYTSLRKSARLAQIPGTRLHAIKQRQKAANRALKKS 374
Query: 190 PAMKAE 173
K+E
Sbjct: 375 IKQKSE 380
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 112 bits (269), Expect = 1e-23
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 6/142 (4%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
G GK RNRR QR+G LI ++++G AFRNI GV+ LAPGGHLGRF+I
Sbjct: 192 GSGKARNRRYTQRRGVLIVHDQNEGLANAFRNISGVDISNVXRLNIRDLAPGGHLGRFII 251
Query: 535 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA---PNKR 365
WT+ A+ +LD L+G+ + K + P P + NTDL+R++ S ++ VL+A +K+
Sbjct: 252 WTEGAYKKLDKLYGTRFRTALLKNEYKHPTPSVTNTDLSRIIHSPTVQSVLKARGKQSKK 311
Query: 364 VIRATRKL---NPLTNNKAMLK 308
+I R L + L+ N A +K
Sbjct: 312 IINVRRNLLIASKLSQNNARIK 333
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 111 bits (268), Expect = 1e-23
Identities = 56/152 (36%), Positives = 86/152 (56%)
Frame = -3
Query: 709 GKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWT 530
GKMRNR+ GPLI ++ D G +AFRNIPGV+ LAPGG +GR IW+
Sbjct: 194 GKMRNRKYKISNGPLIIYSXDSGIKKAFRNIPGVDLCNVTKLNLLKLAPGGSIGRLCIWS 253
Query: 529 QSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRAT 350
+ AF +LD ++G KKN+ LP+P + N D+ R++ SD+++ L + T
Sbjct: 254 EDAFKKLDVIYGKTFQKYVTKKNYILPKPIVNNADIYRIINSDQVQASLLDKKSPCKKRT 313
Query: 349 RKLNPLTNNKAMLKLNPYAAVLKRKAILELRR 254
+ N LTN +LNP +L+ A+ ++++
Sbjct: 314 QNKNSLTNFAVRCRLNPAYKLLRALAVRKMKK 345
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 111 bits (267), Expect = 2e-23
Identities = 55/146 (37%), Positives = 88/146 (60%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
G+GKMRNRR I RKGPL+ +N + R FRN+PGV+ LAPG H GR ++
Sbjct: 180 GRGKMRNRRYITRKGPLVIYNTED-VARGFRNLPGVDLCHVSSIRLLELAPGSHPGRLIL 238
Query: 535 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR 356
WT+SAF LD ++ + K+N+ LP+ + TD+ R+L+SD ++K P + +
Sbjct: 239 WTKSAFASLDDVYAA-------KQNYTLPRSCITQTDIERILQSDAVQKTF-VPKRDPLV 290
Query: 355 ATRKLNPLTNNKAMLKLNPYAAVLKR 278
RK++P ++ +A+ +L+P V+ +
Sbjct: 291 IERKVDPFSSKEALARLDPSGTVMPK 316
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 103 bits (247), Expect = 4e-21
Identities = 52/118 (44%), Positives = 71/118 (60%)
Frame = -3
Query: 523 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 344
AF +LD L+G+W + K N+NLP KM NTDL+R+LKS EI++ L+AP K++ R K
Sbjct: 95 AFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQRALQAPRKKIHRRVLK 154
Query: 343 LNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEK 170
NPL N MLKLNPYA ++R I LR+ KN K D + L+ + +K
Sbjct: 155 KNPLKNLGIMLKLNPYAKTMRRNTI--LRQAKNHKLRMDKSAAALEAKSEEKGVPGKK 210
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 91.9 bits (218), Expect = 1e-17
Identities = 59/172 (34%), Positives = 90/172 (52%)
Frame = -3
Query: 712 KGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIW 533
KGK R +KGPL+ +N+D+G +AFRNIPGVE LAP +GR +W
Sbjct: 190 KGKFRRAAYKTKKGPLVIYNEDKGIVKAFRNIPGVETISVKALALAKLAPAAQVGRLTVW 249
Query: 532 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRA 353
T+SAF LD ++ S KK F+LP+ M N D+ ++ SD ++ VL K V+
Sbjct: 250 TESAFKALDGIYES-------KKRFSLPRSIMTNADIEAVITSDAVQSVLN-EKKEVV-- 299
Query: 352 TRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSK 197
PL + KL+ A +KA+ E+ L+A +A+++ ++ K
Sbjct: 300 -----PLPKCRCCKKLSVGACEDWQKALKEV---AELRAAQEAKRTSPEVVK 343
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 91.5 bits (217), Expect = 2e-17
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGX-TRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFV 539
GKGKMRNRR I RKGPLI + + +AFRNIPGVE LAPGGHLGRFV
Sbjct: 55 GKGKMRNRRYISRKGPLIVYGMEGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFV 114
Query: 538 IWTQSAFGRLDPLFGSWKTPSKQKK 464
IWT+S+F +LD ++ S++ ++++
Sbjct: 115 IWTKSSFEKLDSIYRSFEKKLRRRR 139
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 88.6 bits (210), Expect = 1e-16
Identities = 48/114 (42%), Positives = 62/114 (54%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
GKGKMRNRR QRKG LI + FRNI GV+ LAPGG GR +I
Sbjct: 189 GKGKMRNRRYTQRKGILIVHG-ESSEMLGFRNIRGVDQMSIDSLDLLELAPGGVAGRLII 247
Query: 535 WTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 374
WT+SAF +LD +FG + ++ F LP + + DL L SD ++ +L P
Sbjct: 248 WTESAFEKLDKIFGGVEREAELTPGFKLPNRIVTHDDLEELFYSDAVQAILDEP 301
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 83.4 bits (197), Expect = 5e-15
Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = -3
Query: 523 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IRATR 347
AF +LD L+G+W + K N+NLP KM NTDL+R+LK I++ LRAP KR+ R +
Sbjct: 173 AFCKLDDLYGTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQRALRAPRKRIHRRVLK 232
Query: 346 KLNPLTNNKAMLKLNP 299
K NPL N + MLKLNP
Sbjct: 233 KKNPLKNLRLMLKLNP 248
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 65.7 bits (153), Expect = 1e-09
Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Frame = -3
Query: 709 GKMRNRRRIQRKGPLIXFNKDQ-GXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIW 533
G+ R+ R+ + GPLI RAFRNIPGVE LAP G LGR +W
Sbjct: 187 GRARDGRKKRPVGPLIILRATAVEGKRAFRNIPGVEVACVERLNLLKLAPAGALGRLCVW 246
Query: 532 TQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRA 353
++SAF LD +P + N DL+ L++S ++ LRAP + +A
Sbjct: 247 SKSAFEALDDYIKM------------MPTKLLKNADLSALIESTPVQAALRAPREGTPKA 294
Query: 352 TRK 344
TRK
Sbjct: 295 TRK 297
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 64.5 bits (150), Expect = 3e-09
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Frame = -3
Query: 442 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL- 266
KM N+DL+R+LK EI++ L+AP K + K NPLTN + MLKLNP A + R IL
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTNLRIMLKLNPDAKTMHRNTILP 62
Query: 265 ELRRRK-NLKALADAEKSGLKLS---KRNPAMKAEKLRERRRK 149
E R K +K+ ++G +L R A K + RK
Sbjct: 63 EARNHKLQVKSRKQQPRTGSQLGAGCSRGTADKKPAIGREERK 105
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 62.9 bits (146), Expect = 8e-09
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
G+GKMR RR +++K L+ KD G +A +N+PGV+ LAPG H GR +
Sbjct: 179 GRGKMRGRRYVKKKSVLLVVGKDDGVVKAAKNLPGVDAVVVKDLNVELLAPGCHPGRLTV 238
Query: 535 WTQSA 521
WT+SA
Sbjct: 239 WTKSA 243
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
GKGKMRNRR + GPL+ F + ++ RNI ++ LAPGGHLGR I
Sbjct: 186 GKGKMRNRRFKKPTGPLLVFKNN---LKSLRNIANIDCMKISALNLTKLAPGGHLGRLCI 242
Query: 535 WTQSAFGRLDPL 500
W+ AF L+ +
Sbjct: 243 WSSKAFQMLNTI 254
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/70 (40%), Positives = 38/70 (54%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
GKG MR R+ K L+ ++ G +A RNIPGV+ LAPGG GR +
Sbjct: 235 GKGTMRGRKYRTPKSILLVVSQTNGLAKAARNIPGVDIVVAKDLSAEDLAPGGDAGRLTV 294
Query: 535 WTQSAFGRLD 506
WT++A G L+
Sbjct: 295 WTKAAIGALE 304
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/73 (41%), Positives = 39/73 (53%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
GKGK+R R+ KGPL+ D+G + RN GV+ LAPG H GR I
Sbjct: 182 GKGKLRGRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVEVNNINAELLAPGTHAGRLTI 241
Query: 535 WTQSAFGRLDPLF 497
+T+SA +L LF
Sbjct: 242 YTKSAIEKLGDLF 254
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
GKGK R RR ++ K LI ++D+G RN PGV+ LAPG H GR +
Sbjct: 186 GKGKRRGRRYVKPKSVLIVVDEDEGIKLGARNHPGVDVVEAMHLGVEHLAPGAHPGRLTV 245
Query: 535 WTQSAFGRLDPLFG 494
+T A L+ G
Sbjct: 246 FTPGALEVLEERLG 259
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGG 557
G+GKMRNRR + R+GP++ ++G TRAFRNI G++ LAPGG
Sbjct: 191 GRGKMRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLANVSALTLLHLAPGG 242
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQG-XTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFV 539
GKGKMR R+ + GPLI + +A RN+ GV+ LAPG H GR
Sbjct: 188 GKGKMRGRKYKEPIGPLIIVHDSNSPIIKAARNLAGVDVVNAKDVSVIHLAPGAHPGRLT 247
Query: 538 IWTQSAFGRLD 506
I+T+S+ LD
Sbjct: 248 IYTESSIKILD 258
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/69 (40%), Positives = 37/69 (53%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
G+GKMR RR Q K LI ++ +AFR++PGV+ LAPGG GR I
Sbjct: 183 GRGKMRGRRYKQPKSVLIVA-RNSSAMKAFRSLPGVDIASPNSLSIRKLAPGGVGGRLTI 241
Query: 535 WTQSAFGRL 509
+T+ A L
Sbjct: 242 FTEGAIESL 250
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 47.6 bits (108), Expect = 3e-04
Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNK-DQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFV 539
GKGKMR RR + K L+ + + A RN PGV+ LAPGG GR
Sbjct: 209 GKGKMRGRRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVVAVNNLNILVLAPGGVPGRLT 268
Query: 538 IWTQSAFGRLDPLF 497
+WT A +L LF
Sbjct: 269 LWTAPAVEKLRGLF 282
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 46.0 bits (104), Expect = 0.001
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNK-DQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFV 539
GKGK R R I+RKGPLI N ++ +A NIPG++ LAPG GR +
Sbjct: 192 GKGKRRGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDIEEVPNLNVELLAPGAKPGRLL 251
Query: 538 IWTQSAFGRL 509
I ++ A L
Sbjct: 252 IISKDALETL 261
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = -3
Query: 700 RNRRRIQRK--GPLIXFNKDQ-GXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIWT 530
R +R+ +++ GPL+ RAFRNIPGV+ LAP G LGR VI++
Sbjct: 187 RTKRKGKKRPVGPLVVMRSTAVEGKRAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIFS 246
Query: 529 QSAFGRLD 506
+SAF LD
Sbjct: 247 KSAFELLD 254
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 45.6 bits (103), Expect = 0.001
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = -2
Query: 716 W*G*NAQPSSYPA*GAPHNXQQGSGXD--TRLPQHPRCGAPEC*QAEPTEAGSGRSSWTF 543
W +AQP P GAP + + R+PQH R G EC +AEP G+ W
Sbjct: 243 WPRQDAQP---PLRGAPRSDAGDAEQQGHARVPQHLRAGPGECERAEPAAPGARWPRWPL 299
Query: 542 RHLDSVRIRQA*PLIRVMEDTIKTKEELQPAPTEDGQH 429
R LD+V +R A + + ++ +E L A + +H
Sbjct: 300 RDLDAVCVRAAGQDLWHVHGGVRCEEGLHAAGADADEH 337
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 41.9 bits (94), Expect = 0.015
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQG-XTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFV 539
GKGKMR RR K L + A + +PGV+ LAPGGH GR
Sbjct: 194 GKGKMRGRRYKVPKSVLFVLEDPRSPLALAVKGMPGVDVVTPTLLSVLHLAPGGHPGRLT 253
Query: 538 IWTQSAFGRLDPLF 497
I+T A L F
Sbjct: 254 IYTTEALKLLSRRF 267
>UniRef50_Q5AGI4 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 197
Score = 39.9 bits (89), Expect = 0.062
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -3
Query: 385 LRAPNKRV-IRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGL 209
+R +KR+ IR ++K+ + + + M + N +KRK I+ +++R+N+K + +K
Sbjct: 1 MRERSKRIMIRRSKKIMNMKSKRNMKERNKKIMNVKRK-IMNMKKRRNMKKRRNMKKRKN 59
Query: 208 KLSKRNPAMKAEKLRERRRK 149
+RN K +K ER++K
Sbjct: 60 MKKRRNMKRKRKKTMERKKK 79
>UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Rep:
Protein SDA1 homolog - Drosophila melanogaster (Fruit
fly)
Length = 712
Score = 37.5 bits (83), Expect = 0.33
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -3
Query: 475 KQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 305
K+KK+ + K A +L TR+ ++ +++ A K+ + + RK PL ++A +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624
Query: 304 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRKN 146
N + K++ + R + ++A D E+ G K + N +R+ KN
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 37.5 bits (83), Expect = 0.33
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -3
Query: 715 GKGKMRNRRRIQRKGPLIXFNKDQGXTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVI 536
G+G R R+ +R ++ D+ T A RN+ G + LAPGG GR +
Sbjct: 177 GQGSARGRK-YRRPASILFVTSDEPSTAA-RNLAGADVATASEVNTEDLAPGGAPGRLTV 234
Query: 535 WTQSAFGRL 509
+T+SA +
Sbjct: 235 FTESALAEV 243
>UniRef50_A6GVL2 Cluster: Putative cell surface protein SprD; n=1;
Flavobacterium psychrophilum JIP02/86|Rep: Putative cell
surface protein SprD - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 1286
Score = 36.7 bits (81), Expect = 0.58
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = -3
Query: 370 KRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRN 191
K +++AT+K NP T N + K P +R L L+ K+ KA A+AEK +
Sbjct: 310 KPIVKATKKTNPGTKNATVNKKTPADLQKERAEALALKTEKD-KARAEAEKVRKAKELAD 368
Query: 190 PAMKAEKLRERRR 152
KAE L R+
Sbjct: 369 AKEKAEVLAALRK 381
>UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila
pseudoobscura|Rep: GA20803-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 655
Score = 36.7 bits (81), Expect = 0.58
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Frame = -3
Query: 496 GSWKTPSKQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNN 323
G W T + + + K A +L TR+ ++ +++ A K+ + +RK PL +
Sbjct: 502 GQWVTVNHSDGDLKILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTNSRK-RPLEQD 560
Query: 322 KA-MLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRK 149
+A +KLN + K++ + R + ++A D E+ G K + N +R+ K
Sbjct: 561 RAEFVKLNSIEMIFKKRKHDKESRMETVQAGRQDRERFGWKDGRVNEHCSKTNSEKRKTK 620
Query: 148 N 146
N
Sbjct: 621 N 621
>UniRef50_A6SNX0 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 1521
Score = 36.7 bits (81), Expect = 0.58
Identities = 26/91 (28%), Positives = 47/91 (51%)
Frame = -3
Query: 421 TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 242
TRL+ E R+ + A N++ ++A + +N+A L+ A+ KR +E R+RK
Sbjct: 975 TRLISQAE-REEIEA-NRQRVQAAAQARKENSNRARLEGRKAASAKKRT--VEYRKRKEK 1030
Query: 241 KALADAEKSGLKLSKRNPAMKAEKLRERRRK 149
+ + +A K G L + +KL E+R +
Sbjct: 1031 ELIEEAHKEGRILGNSELEARLDKLMEKRER 1061
>UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 966
Score = 35.9 bits (79), Expect = 1.0
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = -3
Query: 448 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 269
Q K AN + RLL S+ + ++P+ ++ KLNP++ N + L LN + L +K++
Sbjct: 330 QHKRANIQV-RLLSSEISKNQSQSPSNNILNQQNKLNPISTNTSQL-LNKQISQLNQKSL 387
Query: 268 LELRRRKNLKALADAEK-SGLKLSKRNPAMKAEKLRERRRKN 146
+ + + ++ A S + S +N ++ R +KN
Sbjct: 388 TQRSQILSKSPISQAANISSMYFSPQNKNSIFQRDRSISQKN 429
>UniRef50_Q9C5C0 Cluster: Mitogen-activated protein kinase 18; n=73;
Viridiplantae|Rep: Mitogen-activated protein kinase 18 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 603
Score = 35.1 bits (77), Expect = 1.8
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = -3
Query: 430 TDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYA-AVLKRKAILELRR 254
TDL KS+ I V ++ + RK NP+T ++ K +P A +L+R + +
Sbjct: 232 TDLLGTPKSETISGVRNDKARKYLTEMRKKNPVTFSQKFSKADPLALRLLQRLLAFDPKD 291
Query: 253 RKN-LKALADAEKSGLKLSKRNPA----MKAEKLRERRR 152
R +ALAD GL +R P+ K E ERRR
Sbjct: 292 RPTPAEALADPYFKGLSKIEREPSSQQISKMEFEFERRR 330
>UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 131;
n=26; Amniota|Rep: Coiled-coil domain-containing protein
131 - Homo sapiens (Human)
Length = 1989
Score = 35.1 bits (77), Expect = 1.8
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = -3
Query: 508 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 335
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 762 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 821
Query: 334 LTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRER 158
+T ++ + LK+ IL ++ LK L E + K S RN K KL E+
Sbjct: 822 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 874
>UniRef50_UPI000150A5BE Cluster: hypothetical protein
TTHERM_00069200; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00069200 - Tetrahymena
thermophila SB210
Length = 560
Score = 34.7 bits (76), Expect = 2.3
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = -3
Query: 478 SKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP----NKRVIRATRKLNPLTNNKAML 311
++ KK L + K + + ++I K++ P NK + +N L+ N
Sbjct: 49 TQNKKKIQLMEDKYTEIERENRILLEKITKIMNPPKTTSNKNQYQDQSVMNRLSRNNNYS 108
Query: 310 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGL-KLSKRNPAMKAEKLRERRRKN 146
+ ++ K+K++ +L RRK L ++ + K L ++ R K E +KN
Sbjct: 109 TIQQ-SSYTKKKSLNQLNRRKELLSIMEENKKILERIKSRKSEYDHRKWEEDHKKN 163
>UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 987
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -3
Query: 286 LKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERR 155
+K K+ ++ ++K KALA E+ +KL KAEKL ERR
Sbjct: 410 IKSKSFRKVEKKKKEKALAKREEELMKLDPEFAKHKAEKLEERR 453
>UniRef50_Q6NE17 Cluster: Putative erythrocyte-binding protein
MAEBL; n=1; Leptospira phage LE1|Rep: Putative
erythrocyte-binding protein MAEBL - Leptospira phage LE1
Length = 859
Score = 34.3 bits (75), Expect = 3.1
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = -3
Query: 469 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 290
KKN +LP+ + +L++++ + + +K I + RK L+ ++ ++ A
Sbjct: 304 KKNSSLPKSQTETKELSKVVNEQDPIETKITQSKNKIDSIRKDKSLSEDEFRTEIEKARA 363
Query: 289 VLKRKAILELRRRKNLKALADAEK 218
L R A+ E + R K+L+D EK
Sbjct: 364 EL-RSAMKEKQARDGFKSLSDLEK 386
>UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr protein;
n=1; Bos taurus|Rep: PREDICTED: similar to Hrnr protein
- Bos taurus
Length = 1606
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 540 SSGLSPHSAGLTPYSGHGRHHQNKRRTSTCPNRR 439
SSG H +GL+ S +G+H R++S+C +R
Sbjct: 566 SSGFGQHGSGLSQSSSYGQHGSTSRQSSSCGQQR 599
>UniRef50_Q4SP98 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 981
Score = 33.5 bits (73), Expect = 5.4
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 559 LPEPASVGSAC*HSG-APHRGCCGRRVSXPDPC 654
LP P G AP RGC G RV PDPC
Sbjct: 687 LPRPQEEAFTLASGGSAPRRGCWGARVCAPDPC 719
>UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1067
Score = 33.1 bits (72), Expect = 7.1
Identities = 22/96 (22%), Positives = 42/96 (43%)
Frame = -3
Query: 529 QSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRAT 350
+S F L + + NLP + + L+ + ++L ++R T
Sbjct: 552 ESQFDNNLSLIDDIENEQSMSNSSNLPLVSNQASAINIKLQEKDFYELLNLESERAAITT 611
Query: 349 RKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 242
+K+N + NNK +LK V + ++ L++ KNL
Sbjct: 612 KKINRIHNNKMVLKSAFEVNVQQSDEVILLKQEKNL 647
>UniRef50_A2G612 Cluster: SNF7 family protein; n=2; Trichomonas
vaginalis G3|Rep: SNF7 family protein - Trichomonas
vaginalis G3
Length = 199
Score = 33.1 bits (72), Expect = 7.1
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = -3
Query: 406 SDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALAD 227
SD++ + + +K + RKL+ LT M L+RKA L+RRK L+
Sbjct: 23 SDQLGRKSESIDKEIAEINRKLSELTKQMKMPSNKSRVPTLRRKATELLKRRKMLEGF-Q 81
Query: 226 AEKSGLKLSKRNPAMKAEKLR 164
+ G + + N A + ++++
Sbjct: 82 GKIDGQRFNIDNMAFQQQQMK 102
>UniRef50_Q9PQ05 Cluster: Unique hypothetical membrane lipoprotein;
n=1; Ureaplasma parvum|Rep: Unique hypothetical membrane
lipoprotein - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 705
Score = 32.7 bits (71), Expect = 9.4
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -3
Query: 370 KRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRN 191
K+ T + A+L + Y+ VLK KA +L+ NLK + D + + L +++
Sbjct: 47 KKFKTTTNSIELFLEGSAVLASHSYSVVLKEKATGDLKTINNLKLVKDNDLNKLIINELK 106
Query: 190 PAMKAE 173
P M E
Sbjct: 107 PNMGYE 112
>UniRef50_Q1MQI5 Cluster: Outer membrane protein; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: Outer membrane protein -
Lawsonia intracellularis (strain PHE/MN1-00)
Length = 601
Score = 32.7 bits (71), Expect = 9.4
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -3
Query: 343 LNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSG 212
LNP+ KA L + PY K+K IL LR R + D K+G
Sbjct: 419 LNPIQGTKATLNVTPYIGKYKKK-ILTLRSRFDFSFYIDVLKTG 461
>UniRef50_Q23MI1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2209
Score = 32.7 bits (71), Expect = 9.4
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = -3
Query: 475 KQKKNFNLPQPKMANTDLTRLLKSDEIR--KVLRAPNKRVIRATR----KLNPLTNNKAM 314
K K +NLP + L RLLK + ++ K L + R ++ +R +PL +N+
Sbjct: 19 KNDKIWNLPPQIIKKKSLLRLLKKNVMKLFKQLTSSTCRYLKFSRYCIANSSPLYSNQIK 78
Query: 313 LKLNPYAAVLKRKAILELRRRK 248
K + AV+ +K + ELR K
Sbjct: 79 FKFSSTDAVVSQKQLEELRNYK 100
>UniRef50_A3LNR4 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 233
Score = 32.7 bits (71), Expect = 9.4
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = -3
Query: 427 DLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRK 248
D+ RLLK D++ +R N+R ++A + L N + LK A K + ++K
Sbjct: 36 DIERLLKKDKLPADVRTENERAVKALKV--ELQNTQFNLKAKQVAK--KYHMVRFFEKKK 91
Query: 247 NLKALADAEKSGLKLSKRNPAMKAEKLRER 158
++ L A K+ +SK + +K R++
Sbjct: 92 AVRKLKQANKNLEDISKTDVRKDIKKARKQ 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,666,855
Number of Sequences: 1657284
Number of extensions: 11018934
Number of successful extensions: 30559
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 29139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30487
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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