Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_E11
(578 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 44 1e-05
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 38 0.001
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 31 0.12
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 31 0.12
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 30 0.21
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.49
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 27 1.5
SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces pombe... 27 1.5
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 26 3.5
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 26 4.6
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 4.6
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 25 6.1
SPBC2G2.06c |apl1||AP-2 adaptor complex subunit Apl1 |Schizosacc... 25 6.1
SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosacch... 25 6.1
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 25 8.0
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 25 8.0
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 25 8.0
SPAC3A12.18 |zwf1|SPAC9.01|glucose-6-phosphate 1-dehydrogenase |... 25 8.0
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 44.4 bits (100), Expect = 1e-05
Identities = 48/173 (27%), Positives = 70/173 (40%), Gaps = 1/173 (0%)
Frame = -1
Query: 524 GSITSEDDVKKALDITKDKFGRLDTLVN-CAGQSITHQIYNFNKDLPSTLADFTKIINVN 348
G + D+ + +D K G +D LVN A Q + I +D+ D T N+
Sbjct: 100 GKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSI----EDIDDEQWDLTFKTNI- 154
Query: 347 TVGTFNTIRLSAGLIGKNEPDANGQRGVIVNTASTIAYEGDIGQXXXXXXXXAIIGMTLP 168
F+ ++ I + ++ IVN +S AY G AI T
Sbjct: 155 ----FSFFWVTKAAISHMKSGSS-----IVNCSSINAYVGRPDLLDYTSTKGAITAFTRG 205
Query: 167 IARDLASKGIRVVTIAPGIFDTPLTSYLPEKMKEFIKRMTPFPSRLGKPEEFA 9
++ A GIRV +APG TPL S K K + P R+G+P E A
Sbjct: 206 LSNQYAQHGIRVNAVAPGPIYTPLVSSTFPKEKIELSDQVPL-GRMGQPVEVA 257
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 37.5 bits (83), Expect = 0.001
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Frame = -1
Query: 458 LDTLVNCAGQSITHQIYNFNKDLPSTLADFTKIINVNTVGTFNTIRLSAGLIGKNEPDAN 279
+DT+V+ AG + + + ++ + II N V + I+LS I + + N
Sbjct: 76 IDTVVHAAG------VLQSSLCVRTSEKEIDSIICTNLV---SAIKLSKMAILEWFRNKN 126
Query: 278 GQRG-VIVNTASTIAYEGDIGQXXXXXXXXAIIGMTLPIARDLASKGIRVVTIAPGIFDT 102
+R +I+N +S ++ G + T +A ++ASKGIRV I+PG DT
Sbjct: 127 SERDRLILNISSRLSTYALPGTSVYAASKAGLESFTKVLAAEVASKGIRVNAISPGYVDT 186
Query: 101 PLTS 90
P+ S
Sbjct: 187 PMLS 190
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 31.1 bits (67), Expect = 0.12
Identities = 31/139 (22%), Positives = 56/139 (40%)
Frame = -1
Query: 518 ITSEDDVKKALDITKDKFGRLDTLVNCAGQSITHQIYNFNKDLPSTLADFTKIINVNTVG 339
+ + +KK+++ FGR+D L+N AG S+ + + +T I N N G
Sbjct: 23 VNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLES------TTEEQIHNIFNTNVFG 76
Query: 338 TFNTIRLSAGLIGKNEPDANGQRGVIVNTASTIAYEGDIGQXXXXXXXXAIIGMTLPIAR 159
I+ + + G+I+N +S AI G++ +
Sbjct: 77 ALEVIKAITPIF------RSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTW 130
Query: 158 DLASKGIRVVTIAPGIFDT 102
++ S G++V I PG T
Sbjct: 131 EMQSIGVKVKIIEPGFTAT 149
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 31.1 bits (67), Expect = 0.12
Identities = 31/139 (22%), Positives = 56/139 (40%)
Frame = -1
Query: 518 ITSEDDVKKALDITKDKFGRLDTLVNCAGQSITHQIYNFNKDLPSTLADFTKIINVNTVG 339
+ + +KK+++ FGR+D L+N AG S+ + + +T I N N G
Sbjct: 23 VNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLES------TTEEQIHNIFNTNVFG 76
Query: 338 TFNTIRLSAGLIGKNEPDANGQRGVIVNTASTIAYEGDIGQXXXXXXXXAIIGMTLPIAR 159
I+ + + G+I+N +S AI G++ +
Sbjct: 77 ALEVIKAITPIF------RSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTW 130
Query: 158 DLASKGIRVVTIAPGIFDT 102
++ S G++V I PG T
Sbjct: 131 EMQSIGVKVKIIEPGFTAT 149
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 30.3 bits (65), Expect = 0.21
Identities = 31/158 (19%), Positives = 63/158 (39%), Gaps = 2/158 (1%)
Frame = -1
Query: 569 KEVTKEIGDDAIAVTGSITSEDDVKKALDITKDKFGRLDTLVNCAGQSI-THQIYNFNKD 393
KE+ + + + ++ + ++ +F +D L+N AG ++ T ++ + N D
Sbjct: 49 KELESKYEVSVLPLKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNID 108
Query: 392 LPSTLADFTKIINVNTVGTFNTIRLSAGLI-GKNEPDANGQRGVIVNTASTIAYEGDIGQ 216
D +I N +G R + KN+ D I+N S E +G
Sbjct: 109 ------DAVTMITTNVLGMMAMTRAVLPIFYSKNKGD-------ILNVGSIAGRESYVGG 155
Query: 215 XXXXXXXXAIIGMTLPIARDLASKGIRVVTIAPGIFDT 102
A+ T + ++ IR++ + PG+ +T
Sbjct: 156 SVYCSTKSALAQFTSALRKETIDTRIRIMEVDPGLVET 193
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.1 bits (62), Expect = 0.49
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Frame = +1
Query: 283 ASGSFLPISPADNLIVLNVPTVLTLIIFVKSANVLGKSLLKL*I*CVIDCPAQLTSVSSL 462
+S S + S + + +L+ PT T + + S++++ S L + P +S+S+
Sbjct: 609 SSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSS-SISTIPIS-SSLSTY 666
Query: 463 PNLSLVMSSAFLTSSSDVI---DPVTAIASSPISXVTSL 570
+ + SS ++SSS +I PV + +SSPI +SL
Sbjct: 667 SSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPSSSSL 705
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 176 TLPIARDLASKGIRVVTIAPGIFDTPLTSYLP 81
++ +A+ L GI V++ PG+ T LT Y P
Sbjct: 224 SIALAKRLEKYGIYSVSLHPGVIRTELTRYSP 255
>SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 356 NVNTVGTFNTIRLSAGLIGKN-EPDANGQRGVIVNTAST 243
N +T G F+T SAGL G++ +P + G+ NT +T
Sbjct: 170 NTSTFGQFSTQPASAGLFGQSTQPSGSTGFGLSNNTQTT 208
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 26.2 bits (55), Expect = 3.5
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +1
Query: 433 PAQLTSVSSLPNLSLVMSSAFLTSSSDVIDPVTAIASSPISXVTS 567
P+ ++S +S+P++S +SS+ TSS T+++SS S V S
Sbjct: 141 PSAVSSTTSIPSISSTISSSVSTSS------FTSLSSSGFSTVLS 179
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 25.8 bits (54), Expect = 4.6
Identities = 31/150 (20%), Positives = 60/150 (40%)
Frame = -1
Query: 545 DDAIAVTGSITSEDDVKKALDITKDKFGRLDTLVNCAGQSITHQIYNFNKDLPSTLADFT 366
D + V G +T K +++ KFG+LD+++ AG + K + + ++
Sbjct: 52 DSFVHVKGDVTEVG--KASIETAIKKFGKLDSVILNAG-----VLEPIAKIADADINEWR 104
Query: 365 KIINVNTVGTFNTIRLSAGLIGKNEPDANGQRGVIVNTASTIAYEGDIGQXXXXXXXXAI 186
K+ ++N T++ + P +G IV +S A AI
Sbjct: 105 KLFDINFFSVVETVKYAI-------PHLRKTKGTIVIVSSGAAVRVFPAWAAYCCSKAAI 157
Query: 185 IGMTLPIARDLASKGIRVVTIAPGIFDTPL 96
+ + + + I V + PG+ DTP+
Sbjct: 158 NMLVMNLGSE--EPDIMSVAVRPGVVDTPM 185
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.8 bits (54), Expect = 4.6
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +1
Query: 277 PLASGSFLPIS-PADNLIVLNVPTVLTLIIFVKSANVLGKSLLKL*I*CVIDCPAQLTSV 453
P+ S + + S P + LN T +T + S+ + S + + I L +
Sbjct: 3371 PITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV-VNSSTPITSSTALNTS 3429
Query: 454 SSLPNLSLVMSSAFLTSSSDVIDPVTAIASSPI 552
+ + + ++V SS +TSSS V++ TAIASS I
Sbjct: 3430 TPITSSTVVNSSTPITSSS-VLNSSTAIASSSI 3461
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 25.4 bits (53), Expect = 6.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 261 YNSSLAISVWFILTNQSSR*PNCVECSNSV 350
YNS +S + TN S R PN +E + +
Sbjct: 361 YNSGETMSTYLNQTNTSGRSPNSMEATEQI 390
>SPBC2G2.06c |apl1||AP-2 adaptor complex subunit Apl1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 677
Score = 25.4 bits (53), Expect = 6.1
Identities = 19/81 (23%), Positives = 34/81 (41%)
Frame = +3
Query: 321 PNCVECSNSVDIDNFCKICQCTG*IFIKVINLMCY*LSSTID*CIKSAKFVFGYVQCFFN 500
P VE ++ +D++ K +C G + IK+ + S I+ +V
Sbjct: 356 PEFVEYASEIDVELVRKSVKCIGYLAIKIEERKNDCIDSLIELMNTKVTYVIQEAVIVIR 415
Query: 501 IILRCY*SRHSYSIIPYFFXN 563
ILR Y + S++P + N
Sbjct: 416 DILRKYPGSYK-SLVPILYEN 435
>SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 469
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 22 GLPNLEGNGVIRLMNSFIFSGKYDVRGVSNIP-GAMVTTRM 141
G+P + G+++ +N F+ G Y V + P G + TT M
Sbjct: 349 GVPFDDAKGIVKNVNGFVRPGIYTSGWVKHGPIGVIATTMM 389
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 25.0 bits (52), Expect = 8.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 262 ITPLWPLASGSFLPISPADNLIVLNVP 342
+ PL P SGS PA NL +NVP
Sbjct: 1017 VKPLLPPRSGSSSSGVPAPNLTPVNVP 1043
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 113 IFDTPLTSYLPEKMKEFIKRMTPFPSRLGK 24
++ PL + + E + F KR+TP+ R+ +
Sbjct: 578 VYIAPLKALVQEMVNNFSKRLTPYNIRVAE 607
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 25.0 bits (52), Expect = 8.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 147 KRHSSCYHSTRYI*HAPNVIFTRENEGIHQAYDSIPLE 34
KR + + +YI VI TR + + Q YDSI L+
Sbjct: 405 KRLAESNDTAQYIRPLQQVILTRLFQQLSQVYDSISLK 442
>SPAC3A12.18 |zwf1|SPAC9.01|glucose-6-phosphate 1-dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 500
Score = 25.0 bits (52), Expect = 8.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 92 SYLPEKMKEFIKRMTPFPSRLGKPEEF 12
S EK++EF KR + + KPE+F
Sbjct: 75 SQAKEKLEEFKKRCSYYRGSYDKPEDF 101
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,205,405
Number of Sequences: 5004
Number of extensions: 42903
Number of successful extensions: 165
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 248115846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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