Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_E10
         (625 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0611 + 24347384-24350015,24350126-24350497,24350561-243508...    29   3.0  
03_05_0916 - 28762214-28762414,28763144-28763242,28763573-287639...    28   5.2  

>02_04_0611 +
           24347384-24350015,24350126-24350497,24350561-24350805,
           24350997-24351059,24351919-24352422
          Length = 1271

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +3

Query: 282 LYFLILLVKLDVTYNYCVRWRPSDGVYGNITS 377
           L +L LL KLD++YN      P+ GV+ N+TS
Sbjct: 562 LGYLPLLSKLDLSYNNLQGEVPTVGVFRNVTS 593


>03_05_0916 -
           28762214-28762414,28763144-28763242,28763573-28763998,
           28764259-28764501,28764706-28764927,28765392-28765721,
           28767380-28767800,28768292-28768404,28769224-28769367,
           28769439-28769570,28769802-28770013,28770983-28771505
          Length = 1021

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
 Frame = -3

Query: 566 SSFIIELSKCLSYCNI-VCKEYIDK 495
           SS  IEL K L+YC++ +CKE++++
Sbjct: 547 SSGAIELLKGLNYCDLKICKEFLEE 571


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,394,018
Number of Sequences: 37544
Number of extensions: 189937
Number of successful extensions: 359
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)