Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_E09
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    29   0.16 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   6.0  
AY745215-1|AAU93482.1|   56|Anopheles gambiae cytochrome P450 pr...    23   7.9  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   7.9  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 28.7 bits (61), Expect = 0.16
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 362 NIASNI*NPPTILLKKSKSPKNIGVEFFINIDNSLIR 472
           N AS I N  T L+   + PK+      IN+ NS+IR
Sbjct: 748 NKASRITNALTCLMPNKRGPKSRSRRQLINVGNSIIR 784


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 250  FKELKLIKLTIVMFILSIVIIMC*TSLVHRCRSI 351
            + EL+ I L  VMF   I+II     L+HR  +I
Sbjct: 976  YLELEPIGLVFVMFFGLILIIQFVAMLMHRFGTI 1009


>AY745215-1|AAU93482.1|   56|Anopheles gambiae cytochrome P450
           protein.
          Length = 56

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 501 VNFIGNFILALMRELSMLIKNS 436
           VN I N  L LM+EL    KNS
Sbjct: 23  VNIIRNMSLDLMKELKENYKNS 44


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 470 RARMKFPIKFTKETLPVTIAITNASKNVKNSLAFRI 577
           RAR++ P K  K+ +   + ++    N+K + A  +
Sbjct: 324 RARVRLPAKAAKQLVGQKLTVSCCISNIKEAPAINL 359


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,742
Number of Sequences: 2352
Number of extensions: 10784
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)