Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_E07
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    88   2e-19
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.3  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   8.3  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 88.2 bits (209), Expect = 2e-19
 Identities = 41/106 (38%), Positives = 62/106 (58%)
 Frame = -1

Query: 455 VIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRG 276
           ++FV++ +    LA L+++  FP   IH +  Q ER      FK  +  +L+AT++  RG
Sbjct: 427 LVFVETKRNADYLASLMSETQFPTTSIHGDRLQREREMALYDFKSGRMDVLIATSVAARG 486

Query: 275 MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEND 138
           +DI+ VN V NYD+P+  D Y+HR+ R GR G KG A +    E D
Sbjct: 487 LDIKNVNHVVNYDLPKSIDDYVHRIGRTGRVGNKGRATSFYDPEAD 532


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 352 SSWVIFLWIPMAGKFWSV 405
           SS +IF+WI   G+ WSV
Sbjct: 84  SSGIIFVWIKYEGR-WSV 100


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 426 HSSGTTAHRPELPCHWYPQK 367
           HS GT+ HR  LP  +  Q+
Sbjct: 139 HSFGTSTHRHHLPQQYQQQQ 158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,183
Number of Sequences: 2352
Number of extensions: 13359
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)