Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_E05
(675 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20352-1|AAC16436.1| 334|Homo sapiens malate dehydrogenase prot... 172 8e-43
D55654-1|BAA09513.1| 334|Homo sapiens cytosolic malate dehydrog... 172 8e-43
CR457405-1|CAG33686.1| 334|Homo sapiens MDH1 protein. 172 8e-43
BC001484-1|AAH01484.1| 334|Homo sapiens malate dehydrogenase 1,... 172 8e-43
AC016734-1|AAY14893.1| 334|Homo sapiens unknown protein. 172 8e-43
BC088356-1|AAH88356.1| 518|Homo sapiens malate dehydrogenase 1B... 60 9e-09
BC033509-1|AAH33509.1| 283|Homo sapiens MDH1B protein protein. 54 5e-07
AC008269-1|AAX93274.1| 283|Homo sapiens unknown protein. 54 5e-07
BC040341-1|AAH40341.1| 1063|Homo sapiens KIAA1618 protein. 31 4.9
BC036891-1|AAH36891.1| 1063|Homo sapiens KIAA1618 protein. 31 4.9
AB046838-1|BAB13444.1| 1415|Homo sapiens KIAA1618 protein protein. 31 4.9
>U20352-1|AAC16436.1| 334|Homo sapiens malate dehydrogenase
protein.
Length = 334
Score = 172 bits (419), Expect = 8e-43
Identities = 83/159 (52%), Positives = 105/159 (66%), Gaps = 2/159 (1%)
Frame = -3
Query: 673 IGVPVKDXKRVIIWGNHSSTQFPDASNAVAIVGGAQKSVSEIINDDAYLKGAFVTTVQKR 494
+GV D K VIIWGNHSSTQ+PD ++A + G + V E + DD++LKG FVTTVQ+R
Sbjct: 171 LGVTANDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQR 230
Query: 493 GAAVIXXXXXXXXXXXXXXXSDHMRD-WFLGTEDRWVSMGVVSDG-SYGTPRDVVYSFPV 320
GAAVI DH+RD WF E +VSMGV+SDG SYG P D++YSFPV
Sbjct: 231 GAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPV 290
Query: 319 TVTNGKWKIVEGLTISDFARQMLDATGKELVEEKQEALD 203
+ N WK VEGL I+DF+R+ +D T KEL EEK+ A +
Sbjct: 291 VIKNKTWKFVEGLPINDFSREKMDLTAKELTEEKESAFE 329
>D55654-1|BAA09513.1| 334|Homo sapiens cytosolic malate
dehydrogenase protein.
Length = 334
Score = 172 bits (419), Expect = 8e-43
Identities = 83/159 (52%), Positives = 105/159 (66%), Gaps = 2/159 (1%)
Frame = -3
Query: 673 IGVPVKDXKRVIIWGNHSSTQFPDASNAVAIVGGAQKSVSEIINDDAYLKGAFVTTVQKR 494
+GV D K VIIWGNHSSTQ+PD ++A + G + V E + DD++LKG FVTTVQ+R
Sbjct: 171 LGVTANDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQR 230
Query: 493 GAAVIXXXXXXXXXXXXXXXSDHMRD-WFLGTEDRWVSMGVVSDG-SYGTPRDVVYSFPV 320
GAAVI DH+RD WF E +VSMGV+SDG SYG P D++YSFPV
Sbjct: 231 GAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPV 290
Query: 319 TVTNGKWKIVEGLTISDFARQMLDATGKELVEEKQEALD 203
+ N WK VEGL I+DF+R+ +D T KEL EEK+ A +
Sbjct: 291 VIKNKTWKFVEGLPINDFSREKMDLTAKELTEEKESAFE 329
>CR457405-1|CAG33686.1| 334|Homo sapiens MDH1 protein.
Length = 334
Score = 172 bits (419), Expect = 8e-43
Identities = 83/159 (52%), Positives = 105/159 (66%), Gaps = 2/159 (1%)
Frame = -3
Query: 673 IGVPVKDXKRVIIWGNHSSTQFPDASNAVAIVGGAQKSVSEIINDDAYLKGAFVTTVQKR 494
+GV D K VIIWGNHSSTQ+PD ++A + G + V E + DD++LKG FVTTVQ+R
Sbjct: 171 LGVTANDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQR 230
Query: 493 GAAVIXXXXXXXXXXXXXXXSDHMRD-WFLGTEDRWVSMGVVSDG-SYGTPRDVVYSFPV 320
GAAVI DH+RD WF E +VSMGV+SDG SYG P D++YSFPV
Sbjct: 231 GAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPV 290
Query: 319 TVTNGKWKIVEGLTISDFARQMLDATGKELVEEKQEALD 203
+ N WK VEGL I+DF+R+ +D T KEL EEK+ A +
Sbjct: 291 VIKNKTWKFVEGLPINDFSREKMDLTAKELTEEKESAFE 329
>BC001484-1|AAH01484.1| 334|Homo sapiens malate dehydrogenase 1,
NAD (soluble) protein.
Length = 334
Score = 172 bits (419), Expect = 8e-43
Identities = 83/159 (52%), Positives = 105/159 (66%), Gaps = 2/159 (1%)
Frame = -3
Query: 673 IGVPVKDXKRVIIWGNHSSTQFPDASNAVAIVGGAQKSVSEIINDDAYLKGAFVTTVQKR 494
+GV D K VIIWGNHSSTQ+PD ++A + G + V E + DD++LKG FVTTVQ+R
Sbjct: 171 LGVTANDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQR 230
Query: 493 GAAVIXXXXXXXXXXXXXXXSDHMRD-WFLGTEDRWVSMGVVSDG-SYGTPRDVVYSFPV 320
GAAVI DH+RD WF E +VSMGV+SDG SYG P D++YSFPV
Sbjct: 231 GAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPV 290
Query: 319 TVTNGKWKIVEGLTISDFARQMLDATGKELVEEKQEALD 203
+ N WK VEGL I+DF+R+ +D T KEL EEK+ A +
Sbjct: 291 VIKNKTWKFVEGLPINDFSREKMDLTAKELTEEKESAFE 329
>AC016734-1|AAY14893.1| 334|Homo sapiens unknown protein.
Length = 334
Score = 172 bits (419), Expect = 8e-43
Identities = 83/159 (52%), Positives = 105/159 (66%), Gaps = 2/159 (1%)
Frame = -3
Query: 673 IGVPVKDXKRVIIWGNHSSTQFPDASNAVAIVGGAQKSVSEIINDDAYLKGAFVTTVQKR 494
+GV D K VIIWGNHSSTQ+PD ++A + G + V E + DD++LKG FVTTVQ+R
Sbjct: 171 LGVTANDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQR 230
Query: 493 GAAVIXXXXXXXXXXXXXXXSDHMRD-WFLGTEDRWVSMGVVSDG-SYGTPRDVVYSFPV 320
GAAVI DH+RD WF E +VSMGV+SDG SYG P D++YSFPV
Sbjct: 231 GAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPV 290
Query: 319 TVTNGKWKIVEGLTISDFARQMLDATGKELVEEKQEALD 203
+ N WK VEGL I+DF+R+ +D T KEL EEK+ A +
Sbjct: 291 VIKNKTWKFVEGLPINDFSREKMDLTAKELTEEKESAFE 329
>BC088356-1|AAH88356.1| 518|Homo sapiens malate dehydrogenase 1B,
NAD (soluble) protein.
Length = 518
Score = 59.7 bits (138), Expect = 9e-09
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Frame = -3
Query: 649 KRVIIWGNHSSTQFPDASNA------VAIVGGAQKS--VSEIINDDAYLKGAFVTTVQKR 494
K VIIWGN S + D AI G S V +I D ++K FV ++
Sbjct: 306 KDVIIWGNISGNNYVDLRKTRVYRYESAIWGPLHYSRPVLNLIFDSEWVKREFVAILKN- 364
Query: 493 GAAVIXXXXXXXXXXXXXXXSDHMRDWFLGTED-RWVSMGVVSDGSYGTPRDVVYSFPVT 317
+ + ++ W+ G+ VS+G++S+G +G P+ +V+S PV
Sbjct: 365 ---LTTTGRQFGGILAAHSIATTLKYWYHGSPPGEIVSLGILSEGQFGIPKGIVFSMPVK 421
Query: 316 VTNGKWKIVEGLTISDFARQMLDATGKELVEEKQEAL 206
NG W ++ L + + Q++ +L++EK AL
Sbjct: 422 FENGTWVVLTDLKDVEISEQIMTRMTSDLIQEKLVAL 458
>BC033509-1|AAH33509.1| 283|Homo sapiens MDH1B protein protein.
Length = 283
Score = 54.0 bits (124), Expect = 5e-07
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -3
Query: 424 MRDWFLGTED-RWVSMGVVSDGSYGTPRDVVYSFPVTVTNGKWKIVEGLTISDFARQMLD 248
++ W+ G+ VS+G++S+G +G P+ +V+S PV NG W ++ L + + Q++
Sbjct: 172 LKYWYHGSPPGEIVSLGILSEGQFGIPKGIVFSMPVKFENGTWVVLTDLKDVEISEQIMT 231
Query: 247 ATGKELVEEKQEAL 206
+L++EK AL
Sbjct: 232 RMTSDLIQEKLVAL 245
>AC008269-1|AAX93274.1| 283|Homo sapiens unknown protein.
Length = 283
Score = 54.0 bits (124), Expect = 5e-07
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -3
Query: 424 MRDWFLGTED-RWVSMGVVSDGSYGTPRDVVYSFPVTVTNGKWKIVEGLTISDFARQMLD 248
++ W+ G+ VS+G++S+G +G P+ +V+S PV NG W ++ L + + Q++
Sbjct: 172 LKYWYHGSPPGEIVSLGILSEGQFGIPKGIVFSMPVKFENGTWVVLTDLKDVEISEQIMT 231
Query: 247 ATGKELVEEKQEAL 206
+L++EK AL
Sbjct: 232 RMTSDLIQEKLVAL 245
>BC040341-1|AAH40341.1| 1063|Homo sapiens KIAA1618 protein.
Length = 1063
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 301 WKIVEGLTISDFARQMLDATG-KELVEEKQEALDV 200
W +EGL+ S F QMLD + + + EKQ L +
Sbjct: 719 WAALEGLSFSPFREQMLDTSSLLQFMREKQHLLSI 753
>BC036891-1|AAH36891.1| 1063|Homo sapiens KIAA1618 protein.
Length = 1063
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 301 WKIVEGLTISDFARQMLDATG-KELVEEKQEALDV 200
W +EGL+ S F QMLD + + + EKQ L +
Sbjct: 719 WAALEGLSFSPFREQMLDTSSLLQFMREKQHLLSI 753
>AB046838-1|BAB13444.1| 1415|Homo sapiens KIAA1618 protein protein.
Length = 1415
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 301 WKIVEGLTISDFARQMLDATG-KELVEEKQEALDV 200
W +EGL+ S F QMLD + + + EKQ L +
Sbjct: 584 WAALEGLSFSPFREQMLDTSSLLQFMREKQHLLSI 618
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,368,030
Number of Sequences: 237096
Number of extensions: 1928929
Number of successful extensions: 3308
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3297
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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