Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_E03
(719 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B5D79 Cluster: PREDICTED: similar to ENSANGP000... 196 3e-49
UniRef50_Q96Q11 Cluster: tRNA-nucleotidyltransferase 1, mitochon... 192 7e-48
UniRef50_UPI0000D568E8 Cluster: PREDICTED: similar to CG2100-PA;... 187 2e-46
UniRef50_A7RRV1 Cluster: Predicted protein; n=1; Nematostella ve... 177 3e-43
UniRef50_Q9VNH2 Cluster: CG2100-PA; n=9; Coelomata|Rep: CG2100-P... 173 3e-42
UniRef50_UPI0000DB7A53 Cluster: PREDICTED: similar to CG2100-PA;... 170 3e-41
UniRef50_UPI0000E49DF6 Cluster: PREDICTED: similar to Chain A, C... 157 3e-37
UniRef50_Q93795 Cluster: Putative uncharacterized protein; n=2; ... 128 1e-28
UniRef50_Q0ARR5 Cluster: Polynucleotide adenylyltransferase regi... 78 3e-13
UniRef50_Q40IR0 Cluster: Polynucleotide adenylyltransferase; n=8... 77 4e-13
UniRef50_Q4FPG1 Cluster: Poly(A) Polymerase; n=3; Bacteria|Rep: ... 76 1e-12
UniRef50_Q2GDC2 Cluster: PolyA polymerase family protein; n=1; N... 74 4e-12
UniRef50_Q5NNN0 Cluster: TRNA nucleotidyltransferase; n=3; Sphin... 72 1e-11
UniRef50_Q6G2K6 Cluster: Poly(A) polymerase; n=6; Rhizobiales|Re... 71 2e-11
UniRef50_Q5P9P8 Cluster: Poly (A) polymerase; n=5; Anaplasmatace... 71 4e-11
UniRef50_Q8FZD7 Cluster: PolyA polymerase family protein; n=13; ... 69 9e-11
UniRef50_Q1GRA3 Cluster: Polynucleotide adenylyltransferase regi... 68 2e-10
UniRef50_A0NYQ1 Cluster: Poly(A) polymerase; n=1; Stappia aggreg... 68 2e-10
UniRef50_A4EGY8 Cluster: PolyA polymerase family protein; n=2; R... 65 2e-09
UniRef50_A3UG83 Cluster: Probable poly(A) polymerase; n=1; Ocean... 64 3e-09
UniRef50_Q1GCJ3 Cluster: Polynucleotide adenylyltransferase regi... 64 4e-09
UniRef50_Q9AB26 Cluster: Poly A polymerase family protein; n=3; ... 63 6e-09
UniRef50_A5CCR6 Cluster: PolyA polymerase; n=1; Orientia tsutsug... 63 8e-09
UniRef50_Q92JQ2 Cluster: Poly(A) polymerase [EC:2.7.7.19]; n=14;... 62 1e-08
UniRef50_Q2RXH4 Cluster: Polynucleotide adenylyltransferase regi... 56 7e-07
UniRef50_Q0FDP1 Cluster: Poly A polymerase family protein; n=1; ... 56 9e-07
UniRef50_Q89SD1 Cluster: Poly(A) polymerase; n=11; Bradyrhizobia... 55 2e-06
UniRef50_A0NJB1 Cluster: Polynucleotide adenylyltransferase; n=2... 54 3e-06
UniRef50_Q44038 Cluster: ORFIII; n=1; Acidaminococcus fermentans... 54 4e-06
UniRef50_Q0C5B7 Cluster: TRNA nucleotidyltransferase/poly(A) pol... 54 5e-06
UniRef50_Q0BRM1 Cluster: Poly(A) polymerase; n=2; Acetobacterace... 52 1e-05
UniRef50_A5NWU9 Cluster: Polynucleotide adenylyltransferase regi... 52 1e-05
UniRef50_Q2VZL3 Cluster: TRNA nucleotidyltransferase/poly(A) pol... 51 2e-05
UniRef50_Q1VLB3 Cluster: PolyA polymerase family protein; n=1; P... 51 2e-05
UniRef50_Q2B3W5 Cluster: TRNA nucleotidyltransferase; n=1; Bacil... 48 2e-04
UniRef50_Q7P2R0 Cluster: POLY(A) POLYMERASE; n=3; Fusobacterium ... 48 2e-04
UniRef50_A3VV21 Cluster: Possible poly(A) polymerase; n=1; Parvu... 48 2e-04
UniRef50_Q5FU27 Cluster: Poly(A) polymerase/t-RNA nucleotidyltra... 48 3e-04
UniRef50_A6CRX0 Cluster: tRNA nucleotidyltransferase; n=1; Bacil... 47 4e-04
UniRef50_A0UUV7 Cluster: Metal dependent phosphohydrolase; n=1; ... 47 4e-04
UniRef50_Q41GT8 Cluster: Polynucleotide adenylyltransferase; n=1... 47 5e-04
UniRef50_Q0TV45 Cluster: PolyA polymerase family protein; n=3; C... 46 7e-04
UniRef50_A0LF07 Cluster: Polynucleotide adenylyltransferase regi... 46 7e-04
UniRef50_Q3XW94 Cluster: Polynucleotide adenylyltransferase; n=1... 46 0.001
UniRef50_Q2LST9 Cluster: Poly A polymerase; n=1; Syntrophus acid... 45 0.002
UniRef50_Q1EZ98 Cluster: HDIG; n=1; Clostridium oremlandii OhILA... 44 0.003
UniRef50_Q1ASB2 Cluster: Polynucleotide adenylyltransferase regi... 44 0.003
UniRef50_Q1LJ89 Cluster: Poly(A) polymerase; n=1; Ralstonia meta... 44 0.004
UniRef50_A5Z8C9 Cluster: Putative uncharacterized protein; n=2; ... 44 0.005
UniRef50_Q7TVB1 Cluster: TRNA nucleotidyltransferase/poly(A) pol... 43 0.007
UniRef50_Q6MEY5 Cluster: Putative poly A polymerase; n=1; Candid... 43 0.009
UniRef50_Q126S3 Cluster: Poly(A) polymerase; n=9; Burkholderiale... 43 0.009
UniRef50_A7DHD6 Cluster: Polynucleotide adenylyltransferase regi... 43 0.009
UniRef50_Q9PLM2 Cluster: Poly(A) polymerase family protein; n=7;... 42 0.012
UniRef50_Q7UWK0 Cluster: Poly A polymerase; n=1; Pirellula sp.|R... 42 0.015
UniRef50_Q1FP87 Cluster: TRNA adenylyltransferase; n=4; Clostrid... 42 0.015
UniRef50_A7H723 Cluster: Poly(A) polymerase; n=2; Anaeromyxobact... 42 0.020
UniRef50_Q895R6 Cluster: Poly(A) polymerase; n=9; Clostridium|Re... 41 0.027
UniRef50_Q5ZVA2 Cluster: Poly(A) polymerase I; n=4; Legionella p... 41 0.027
UniRef50_A4XLP3 Cluster: TRNA adenylyltransferase; n=1; Caldicel... 41 0.027
UniRef50_A4J3L2 Cluster: Polynucleotide adenylyltransferase regi... 41 0.027
UniRef50_Q7VFG8 Cluster: Poly(A) polymerase; n=1; Helicobacter h... 41 0.035
UniRef50_Q660G6 Cluster: Polynucleotide adenylyltransferase; n=3... 41 0.035
UniRef50_Q0AB71 Cluster: Poly(A) polymerase; n=1; Alkalilimnicol... 41 0.035
UniRef50_A6P236 Cluster: Putative uncharacterized protein; n=1; ... 41 0.035
UniRef50_A6NVT9 Cluster: Putative uncharacterized protein; n=1; ... 41 0.035
UniRef50_Q6MM27 Cluster: Poly A polymerase; n=1; Bdellovibrio ba... 40 0.062
UniRef50_Q39TB4 Cluster: Polynucleotide adenylyltransferase regi... 40 0.062
UniRef50_Q093R8 Cluster: Poly(A) polymerase; n=2; Cystobacterine... 40 0.062
UniRef50_Q6YRB3 Cluster: TRNA nucleotidyltransferase/polyA polym... 40 0.082
UniRef50_Q31FF3 Cluster: Poly(A) polymerase; n=1; Thiomicrospira... 40 0.082
UniRef50_Q1Q5Z9 Cluster: Similar to poly(A) polymerase; n=2; Can... 39 0.11
UniRef50_A4A0Y5 Cluster: Poly A polymerase; n=1; Blastopirellula... 39 0.11
UniRef50_P42977 Cluster: CCA-adding enzyme; n=3; Bacillus|Rep: C... 39 0.11
UniRef50_Q62HE1 Cluster: PolyA polymerase; n=45; cellular organi... 39 0.14
UniRef50_A6CGS1 Cluster: Metal dependent phosphohydrolase; n=1; ... 39 0.14
UniRef50_Q6MBL7 Cluster: Putative Poly(A) polymerase; n=1; Candi... 38 0.19
UniRef50_Q6AJ41 Cluster: Related to poly(A) polymerase; n=1; Des... 38 0.19
UniRef50_Q8EQD6 Cluster: CCA-adding enzyme; n=1; Oceanobacillus ... 38 0.19
UniRef50_A6DP87 Cluster: Putative poly(A) polymerase; n=1; Lenti... 38 0.25
UniRef50_Q9F7R3 Cluster: Predicted poly(A) polymerase; n=1; uncu... 38 0.33
UniRef50_Q1YQK0 Cluster: Poly(A) polymerase; n=1; gamma proteoba... 38 0.33
UniRef50_Q7U350 Cluster: CCA-adding enzyme; n=2; Candidatus Bloc... 38 0.33
UniRef50_A6VU49 Cluster: Polynucleotide adenylyltransferase regi... 37 0.44
UniRef50_P44439 Cluster: Probable poly(A) polymerase; n=24; Gamm... 37 0.44
UniRef50_A3IG30 Cluster: TRNA nucleotidyltransferase; n=1; Bacil... 37 0.58
UniRef50_A3DF92 Cluster: Metal dependent phosphohydrolase; n=1; ... 37 0.58
UniRef50_A6W2I1 Cluster: Poly(A) polymerase; n=4; Oceanospirilla... 36 0.76
UniRef50_A1RG69 Cluster: Poly(A) polymerase; n=15; Gammaproteoba... 36 0.76
UniRef50_Q2J4B5 Cluster: Metal dependent phosphohydrolase; n=40;... 36 1.0
UniRef50_O25357 Cluster: Poly(A) polymerase; n=4; Helicobacter|R... 36 1.3
UniRef50_Q8SS78 Cluster: TRNA ADENILYL TRANSFERASE; n=1; Encepha... 36 1.3
UniRef50_A2F779 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q8F4S0 Cluster: Poly(A) polymerase; n=4; Leptospira|Rep... 35 2.3
UniRef50_A0CB80 Cluster: Chromosome undetermined scaffold_163, w... 35 2.3
UniRef50_Q8D2W4 Cluster: CCA-adding enzyme; n=1; Wigglesworthia ... 35 2.3
UniRef50_Q9JZY9 Cluster: PolyA polymerase; n=4; Neisseria|Rep: P... 34 3.1
UniRef50_Q1DJQ5 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q49UH8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_A2BUB7 Cluster: Poly A polymerase family; n=5; Prochlor... 33 5.4
UniRef50_UPI0000F1E3A0 Cluster: PREDICTED: hypothetical protein;... 33 7.1
UniRef50_Q3A9F0 Cluster: PolyA polymerase/tRNA nucleotidyltransf... 33 7.1
UniRef50_A0DIL1 Cluster: Chromosome undetermined scaffold_52, wh... 33 7.1
UniRef50_A3LYX2 Cluster: Phosphatidylinositol-4-kinase involved ... 33 7.1
UniRef50_Q10004 Cluster: Uncharacterized protein T05H10.8; n=2; ... 33 7.1
UniRef50_UPI0001597EB8 Cluster: GerBA; n=1; Bacillus amyloliquef... 33 9.4
UniRef50_Q9Z6U2 Cluster: Poly A Polymerase; n=9; Chlamydiaceae|R... 33 9.4
UniRef50_Q832I1 Cluster: Transcriptional regulator; n=1; Enteroc... 33 9.4
UniRef50_Q1IUE8 Cluster: Metal dependent phosphohydrolase; n=2; ... 33 9.4
UniRef50_A6FZN1 Cluster: Poly(A) polymerase; n=1; Plesiocystis p... 33 9.4
UniRef50_A5EW47 Cluster: Potential RTX family protein; n=1; Dich... 33 9.4
UniRef50_A1ZI16 Cluster: Putative YapH protein; n=2; Microscilla... 33 9.4
UniRef50_A0Q3L3 Cluster: PolyA polymerase family protein; n=1; C... 33 9.4
UniRef50_Q5CUM5 Cluster: Replication protein A1 large subunit; n... 33 9.4
UniRef50_Q233K7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
UniRef50_Q8ZRQ8 Cluster: Poly(A) polymerase; n=89; Proteobacteri... 33 9.4
UniRef50_Q49XM7 Cluster: Response regulator arlR; n=97; Bacteria... 33 9.4
>UniRef50_UPI00015B5D79 Cluster: PREDICTED: similar to
ENSANGP00000010598; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000010598 - Nasonia
vitripennis
Length = 575
Score = 196 bits (479), Expect = 3e-49
Identities = 94/217 (43%), Positives = 141/217 (64%), Gaps = 2/217 (0%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K RVAFVG+P R+ ED+LRI RYFRFYG IA PDNH+E+T+ + NV GL ISGER
Sbjct: 157 KRRVAFVGEPAQRICEDFLRIFRYFRFYGRIADVPDNHDEKTITAIKENVKGLEIISGER 216
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRA--HHLNLSPLSY 366
IW E KIL GNF L ++ G +YMG P + N++ + + A +++ L P+S
Sbjct: 217 IWSEWSKILAGNFHRELTLKLIECGCSKYMGLPENLNLEHFNKICLNAQKNNVKLRPISL 276
Query: 365 LAALVKDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMKQKV 186
+AAL+ +EV L R++F +R+L F+V+HR++K+ + P+KPY+ ++L T K
Sbjct: 277 IAALLHTEEEVLQLFMRLRFPNFDRNLALFIVQHREEKLCENPLKPYQRVVLKTIGKVSD 336
Query: 185 AIEYVREVLKYRGDEELLKRLDNWEIPRFPVSGKTLK 75
E+V E+L+Y+G +LL+ + W+ RFP++G +K
Sbjct: 337 VREFVSELLRYKGSLDLLEEFEKWD-SRFPINGGMVK 372
>UniRef50_Q96Q11 Cluster: tRNA-nucleotidyltransferase 1,
mitochondrial precursor; n=37; Deuterostomia|Rep:
tRNA-nucleotidyltransferase 1, mitochondrial precursor -
Homo sapiens (Human)
Length = 434
Score = 192 bits (468), Expect = 7e-48
Identities = 97/233 (41%), Positives = 145/233 (62%), Gaps = 4/233 (1%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
+V FVG R++EDYLRI+RYFRFYG I KP +H+ ETL + N GL ISGERIW
Sbjct: 180 KVRFVGHAKQRIQEDYLRILRYFRFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIW 239
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAAL 354
ELKKIL GN +L+ + ++ V Y+G P + +++E D + K + P++ LA+L
Sbjct: 240 VELKKILVGNHVNHLIHLIYDLDVAPYIGLPANASLEEFDKVSKNVDGFSPKPVTLLASL 299
Query: 353 VKDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKV----SDRPMKPYESLILNTSMKQKV 186
K D+VT L R+K +K E++L F+V++R D + S P+KPY+ I+++ ++
Sbjct: 300 FKVQDDVTKLDLRLKIAKEEKNLGLFIVKNRKDLIKATDSSDPLKPYQDFIIDS--REPD 357
Query: 185 AIEYVREVLKYRGDEELLKRLDNWEIPRFPVSGKTLKECGXPVGKMYGRXIKK 27
A V E+LKY+G+ LLK + W IP FPVSG +++ G GK G +++
Sbjct: 358 ATTRVCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRKVGISSGKEIGALLQQ 410
>UniRef50_UPI0000D568E8 Cluster: PREDICTED: similar to CG2100-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG2100-PA - Tribolium castaneum
Length = 405
Score = 187 bits (456), Expect = 2e-46
Identities = 101/224 (45%), Positives = 130/224 (58%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
+V FVGD R+KEDYLRI+RYFRFYG IA + D HEE TL + N GLGNISGERIW
Sbjct: 164 KVQFVGDAATRIKEDYLRILRYFRFYGRIAKEADKHEEGTLNAIRENKEGLGNISGERIW 223
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAAL 354
EL+KIL+G P PNV+EL + + HL L P++ L A
Sbjct: 224 MELRKILEG--------------------LPERPNVEELKKVWQNCGHLKLHPITLLCAT 263
Query: 353 VKDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMKQKVAIEY 174
+++ D+ L+SR+K S ERDL F+ EHR K +P+ PY+ L+L + K +Y
Sbjct: 264 LRNQDDAVALNSRLKLSVFERDLALFITEHRAPKPHVKPLMPYQQLVL--KINNKNVFQY 321
Query: 173 VREVLKYRGDEELLKRLDNWEIPRFPVSGKTLKECGXPVGKMYG 42
V EVLKY L+ NW IP+FPV+G LKE G G+ G
Sbjct: 322 VVEVLKYINSPH-LEEFQNWTIPKFPVTGNMLKEVGVESGRKMG 364
>UniRef50_A7RRV1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 414
Score = 177 bits (430), Expect = 3e-43
Identities = 95/235 (40%), Positives = 137/235 (58%), Gaps = 4/235 (1%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K V FVGD +R+KEDYLRI+RYFRFYG IA +PDNH+ +TL V+ GL IS ER
Sbjct: 153 KGHVRFVGDARLRIKEDYLRILRYFRFYGKIATEPDNHDPDTLAVIKELAEGLRIISVER 212
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPL--SPNVQELDMLLKRAHHLNLSPLSY 366
IW E+ KIL GN A +LL+ + ++G+ +G P + + E K + +L P++
Sbjct: 213 IWLEVSKILIGNHAQHLLQMLYDLGIASNIGLPTYDASCMTEFHRAWKESQIFSLQPVTL 272
Query: 365 LAALVKDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYES-LILNTSMKQK 189
L LV E +L K S ER+L F+ EHR K + P+KPY+ L+++ S + K
Sbjct: 273 LCCLVNTACEAEILARHWKLSNAERNLGKFITEHRLPKEHETPLKPYQDMLVVSPSAQSK 332
Query: 188 VAIE-YVREVLKYRGDEELLKRLDNWEIPRFPVSGKTLKECGXPVGKMYGRXIKK 27
+ ++ E+L Y+G EL + + W IP FPV+G LK G G +GR + +
Sbjct: 333 ETLRGHITELLHYQGRHELGEAIACWIIPSFPVTGDHLKSIGLKPGPEFGRTLSQ 387
>UniRef50_Q9VNH2 Cluster: CG2100-PA; n=9; Coelomata|Rep: CG2100-PA -
Drosophila melanogaster (Fruit fly)
Length = 477
Score = 173 bits (422), Expect = 3e-42
Identities = 87/219 (39%), Positives = 127/219 (57%), Gaps = 3/219 (1%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
RV FVG+ D+R+KED+LRI+RYFRFYG IA + +NH++ TL + N GL ISGERIW
Sbjct: 212 RVVFVGEADIRIKEDFLRILRYFRFYGRIASEENNHDKATLAAIKENAKGLARISGERIW 271
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNL--SPLSYLA 360
EL+KI+ GNF L M + EY+G P P + E D L K P+ YLA
Sbjct: 272 SELQKIVPGNFGAALFLEMHRCNLFEYIGLPKEPYLDEFDRLCKALDQFEKPHQPILYLA 331
Query: 359 ALVKDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSD-RPMKPYESLILNTSMKQKVA 183
++ +++ +H R+K S ERDL F+ + R+ S ++ Y+ L L +++
Sbjct: 332 GMLHSVEDAMEMHKRLKLSAYERDLARFITQEREKVGSQYTTLRDYQKLCLQKYIQR--- 388
Query: 182 IEYVREVLKYRGDEELLKRLDNWEIPRFPVSGKTLKECG 66
++V ++LKY G EL +L +W P FP+ G L + G
Sbjct: 389 -DFVEQLLKYSGKLELYNQLKSWVKPDFPIRGNALAQRG 426
>UniRef50_UPI0000DB7A53 Cluster: PREDICTED: similar to CG2100-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG2100-PA
- Apis mellifera
Length = 395
Score = 170 bits (413), Expect = 3e-41
Identities = 81/174 (46%), Positives = 116/174 (66%), Gaps = 2/174 (1%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K RV FVG+P R+KEDYLRI+RYFRFYG IA +PD H+E T+ + N+HGL ISGER
Sbjct: 165 KRRVVFVGNPSHRIKEDYLRILRYFRFYGRIAEQPDVHDESTIIAIKENIHGLQRISGER 224
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDML--LKRAHHLNLSPLSY 366
IW E KIL GN+A L ML + Y+G P +PN++ ++ + + ++++L P+++
Sbjct: 225 IWSEWSKILSGNYAKELTLKMLKCNIARYVGLPENPNIENFKIVYDVFKKNNISLQPITF 284
Query: 365 LAALVKDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNT 204
LA ++KD +EV LH+R+K S +RDL FL + +DK S +K Y+S NT
Sbjct: 285 LAVMLKDENEVFQLHNRLKLSAYDRDLALFLTRYWEDKPSIDLLKFYKSPHCNT 338
>UniRef50_UPI0000E49DF6 Cluster: PREDICTED: similar to Chain A,
Crystal Structure Of Human Cca-Adding Enzyme; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Chain A, Crystal Structure Of Human Cca-Adding Enzyme -
Strongylocentrotus purpuratus
Length = 407
Score = 157 bits (381), Expect = 3e-37
Identities = 71/167 (42%), Positives = 110/167 (65%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
+AFVG+ R++EDYLRI+RYFRFYG IA + + H ETL+ + N HGL ISGERIW
Sbjct: 219 IAFVGNAATRIQEDYLRILRYFRFYGRIARESNKHTPETLQSIRENGHGLAGISGERIWM 278
Query: 530 ELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAALV 351
E++KIL GNFA +L+ M ++ + ++G P ++QEL + +R+ L+ P++ L+AL
Sbjct: 279 EVRKILTGNFAADLIHCMYDLDLARHIGIPPEADLQELHKVYQRSQSLHPHPVTILSALF 338
Query: 350 KDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLIL 210
KD ++V + RM+ S ER +++ R DK P+KPY+ +++
Sbjct: 339 KDENDVLTMEQRMRISAEERKTALYVIAERGDKPHKNPLKPYQDIVV 385
>UniRef50_Q93795 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 436
Score = 128 bits (309), Expect = 1e-28
Identities = 78/235 (33%), Positives = 129/235 (54%), Gaps = 15/235 (6%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
R+AFVGD R++EDYLRI+RYFRF+G I+ HE +T++ + N G+ IS ERIW
Sbjct: 160 RIAFVGDARQRIQEDYLRILRYFRFFGRIS-DCTEHEHDTIQAIVENKDGMAGISAERIW 218
Query: 533 GELKKILQGNFAGNLLKTML-NVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAA 357
ELKKI+ G A +LK M+ + +Y+G P N++ + R + P++ +A
Sbjct: 219 TELKKIVVGRMADEVLKAMIEQCELQKYLGLPKECNLERFHTVFNR-FSKTVEPMTMIAC 277
Query: 356 LVKDLDEVTVLHSRMKFSKLERDLLYFLVEHRD-------------DKVSDRPMKP-YES 219
L +D ++ H K S ER L F++ R D++ D ++P +E+
Sbjct: 278 LCEDEHQIAEFHRITKLSNDERLLGEFILSERQSAVENLKNDDWWIDRIVDLEVRPGHEN 337
Query: 218 LILNTSMKQKVAIEYVREVLKYRGDEELLKRLDNWEIPRFPVSGKTLKECGXPVG 54
++Q++ ++ + VL DEE ++ ++N+E P+FP++G+ L E G G
Sbjct: 338 --QQDRLRQRL-VQLAKSVL---ADEERIQMIENFEAPKFPITGRDLMEAGVRKG 386
>UniRef50_Q0ARR5 Cluster: Polynucleotide adenylyltransferase region;
n=1; Maricaulis maris MCS10|Rep: Polynucleotide
adenylyltransferase region - Maricaulis maris (strain
MCS10)
Length = 419
Score = 77.8 bits (183), Expect = 3e-13
Identities = 76/237 (32%), Positives = 111/237 (46%), Gaps = 13/237 (5%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRF---YGXIALKPDNHEEETLRVLXNNVHGLGNISGE 543
R FVGDP++R++EDYLRI+R FRF YG A PD E + + + GL +S E
Sbjct: 160 RFVFVGDPEMRIREDYLRILRLFRFEAWYGRGA--PD---EAAMAAVLKHREGLHKLSVE 214
Query: 542 RIWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYL 363
R+W ELKK+L + M G+ + M ++ +++ L ++ + L+P S L
Sbjct: 215 RVWAELKKLLAAQDPLAAVTAMRESGLLD-MILGVNGSLRVLSGIIAQDVEYGLAPDSML 273
Query: 362 --AALVKDLDE-VTVLHSRMKFSKLERDLLYFLVE--HRDD---KVSDRPMKPYESLILN 207
AAL E + + ++MK SK E L V R+D SD + L
Sbjct: 274 RFAALADGGPERIRTMAAKMKMSKAEAGRLEGAVNPVAREDVRKAWSDSAAAERAIMALG 333
Query: 206 T-SMKQKVAIEYVREVLKYRGDEELLKRL-DNWEIPRFPVSGKTLKECGXPVGKMYG 42
+ + +V +E EV D LL + W+ P FPV G L G G M G
Sbjct: 334 ARAFEDQVRLEAAGEVAPPPRDWTLLAQFAREWKEPEFPVKGGDLILLGYEPGPMLG 390
>UniRef50_Q40IR0 Cluster: Polynucleotide adenylyltransferase; n=8;
Rickettsiales|Rep: Polynucleotide adenylyltransferase -
Ehrlichia chaffeensis str. Sapulpa
Length = 401
Score = 77.0 bits (181), Expect = 4e-13
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 7/238 (2%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K + F+GDP++R++EDYLRI+R FRFY I + +E + + N+S ER
Sbjct: 143 KKHLNFIGDPEIRIQEDYLRILRAFRFYASIC-SQNKLSDEIVHSCTKYSSYINNLSRER 201
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGV-GEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYL 363
I E K+L N LK M V + + F + P++ + L N PL+ L
Sbjct: 202 IRDEFFKLLLCPNLSNTLKIMQKCHVLDKIIPFEVIPDIMSSETL------SNTDPLTKL 255
Query: 362 AALVK------DLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTS 201
AAL++ LD++ +S ++ L+ L + + +S + + +
Sbjct: 256 AALLRTNNNNHSLDKIKASLCLSNYS--QKTLVSLLNNNLELPLSTTAQHKHINKLGKEI 313
Query: 200 MKQKVAIEYVREVLKYRGDEELLKRLDNWEIPRFPVSGKTLKECGXPVGKMYGRXIKK 27
+ I + L Y + ++ D IP FP+SGK L G GK G ++K
Sbjct: 314 YCNLLRIIHAELNLNYHDLMQYIEYADQLIIPEFPISGKDLLNIGYQPGKNLGITLEK 371
>UniRef50_Q4FPG1 Cluster: Poly(A) Polymerase; n=3; Bacteria|Rep:
Poly(A) Polymerase - Pelagibacter ubique
Length = 424
Score = 75.8 bits (178), Expect = 1e-12
Identities = 56/239 (23%), Positives = 116/239 (48%), Gaps = 9/239 (3%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
+ ++ F+G+ + R+KEDYLR++RY RF+ ++ +H+ + ++ + N+ G+ +IS ER
Sbjct: 165 RGKINFIGNVETRIKEDYLRVLRYVRFF--LSYSKHSHDPQVIKAIKKNLSGVSSISSER 222
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDML--LKRAHHLNLSPLSY 366
+ E +K+L+ N L K + + + FP N+ + + + + L + +
Sbjct: 223 LIDEFQKLLKSNGFLKLTKDKDCLEIINLI-FPQIKNISLFNKMNSFAKKNFLEMDFIFL 281
Query: 365 LAALVKD-LDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPM--KPYESLILNTSMK 195
L+ ++ D D V + SK ++ L FL + +K +++ K + +
Sbjct: 282 LSLMIIDGTDNVDYFIYKFNLSKKDQKRLIFLNKFNLEKNTNQTFSEKNLNKIFYFNGRE 341
Query: 194 QKVAIEYVREVLKYRGDEELLKRLDNW---EIPRFPVSGKTLKE-CGXPVGKMYGRXIK 30
+ + Y + + D +L+K ++ + E+P P TL E P GK G+ +K
Sbjct: 342 ALLDVLYFKIFKSKKVDNKLIKMIEIFKKKEMPVMPFKASTLMEKYKIPEGKELGQKLK 400
>UniRef50_Q2GDC2 Cluster: PolyA polymerase family protein; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: PolyA
polymerase family protein - Neorickettsia sennetsu
(strain Miyayama)
Length = 392
Score = 73.7 bits (173), Expect = 4e-12
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
R+ FVG+P R++EDYLRI+R FRF I P EE L + ++SGERI
Sbjct: 145 RLKFVGEPHQRIEEDYLRILRAFRFQASICKTP--LSEEILHACTKYRKKISSLSGERIQ 202
Query: 533 GELKKILQ-GNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAA 357
GE+ K+L NF + + E +G +S LD R +++ L+ L
Sbjct: 203 GEMFKLLSYVNFLSTVFTMQEAKIIDEVLGAKVS--FSGLDYEKSRLIQDHIAALTLLIR 260
Query: 356 LVKDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMKQKVAIE 177
++ + L+SR + SK + + L E +K P K L N ++ + I
Sbjct: 261 NTENSYNLQWLYSRWRISKKVQKAISILSE---EKEMHCPKKTLAKL-GNELTRKLINIL 316
Query: 176 YVREVLKYRGDEELLKRLDNWEIPRFPVSGKTLKECGXPVGKMYGRXIKK 27
Y L ++ + +N E P FPV G+ L G G G+ +K+
Sbjct: 317 YAENKLSDIQRKDFMLVTNNSERPIFPVMGRDLIPLGY-TGPEIGKKLKQ 365
>UniRef50_Q5NNN0 Cluster: TRNA nucleotidyltransferase; n=3;
Sphingomonadaceae|Rep: TRNA nucleotidyltransferase -
Zymomonas mobilis
Length = 406
Score = 72.1 bits (169), Expect = 1e-11
Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 7/228 (3%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
V F+G+P+ R+ ED+LRI+R+FRF+ +N + E L + + L +S ERI
Sbjct: 152 VRFIGNPETRIAEDHLRILRFFRFFARFG--QNNPDPEALAACIKHANDLMALSRERIAS 209
Query: 530 ELKKILQGNFAGNLLKTMLNVGVGE-YMGFPLSPNVQELDMLLKRA--HHLNLSPLSYLA 360
E+ KIL ++ M+ G+ + + + ++ L L++R +HL+ + L LA
Sbjct: 210 EVLKILALPDPLAVISLMIKSGIFKPILPEITADSILPLQRLVERERLYHLSGNALLRLA 269
Query: 359 ALVKDLDEVT-VLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMKQKVA 183
AL+ + E+ + R++FSK ++ L L+ ++K P+ SL ++ +A
Sbjct: 270 ALLPEGAEMARSVAQRLRFSKEQKKYLIALLTAEEEK----PL----SLAWAIGKEEAIA 321
Query: 182 IEYVREVLKYRGDEEL---LKRLDNWEIPRFPVSGKTLKECGXPVGKM 48
R +L R + + + L NWE P FP+ G L G P G +
Sbjct: 322 ----RFLLSDRDEATVNSAIALLKNWERPVFPLKGGDLIAKGLPAGPL 365
>UniRef50_Q6G2K6 Cluster: Poly(A) polymerase; n=6; Rhizobiales|Rep:
Poly(A) polymerase - Bartonella henselae (Rochalimaea
henselae)
Length = 417
Score = 71.3 bits (167), Expect = 2e-11
Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 21/249 (8%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXI-ALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
V F+G + R++EDYLRI+R+FRF+ A +PD + L+ HGL +S ERIW
Sbjct: 153 VRFIGIAEKRIREDYLRILRFFRFFAWYGAGRPD---VQGLKACVCLKHGLQKLSSERIW 209
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSP--NVQELDMLLKRAHHL--NLSPLSY 366
GE+KK+L L M G+ + FP + + + L+K L + PL
Sbjct: 210 GEMKKLLTAPNPIRALLWMRQSGILTLI-FPETEKWGIDAIHSLVKTEQDLGWKVDPLLR 268
Query: 365 LAALV-KDLDEVTVLHSRMKFSKLERDL------LYFLVEHRDDKVSDRPMKPYESLILN 207
L +L+ D + + R+ S E+ L + ++ D + + + +
Sbjct: 269 LESLLPPDPVRLYEMAHRLPLSHKEKTRLKEWAELEIICQNCSDHFLQKLIYFHGRQPVL 328
Query: 206 TSMKQKVAIEYVREVLKYRGDEELLK-----RL----DNWEIPRFPVSGKTLKECGXPVG 54
+ +A +V +VLK G+E L K RL W+IP FP+SGK L + G G
Sbjct: 329 DQLSLSLAAAHV-DVLK--GNEALQKVEDYMRLYQFAQKWQIPTFPISGKDLMKKGFSKG 385
Query: 53 KMYGRXIKK 27
+ G+ +K+
Sbjct: 386 VLLGQKLKE 394
>UniRef50_Q5P9P8 Cluster: Poly (A) polymerase; n=5;
Anaplasmataceae|Rep: Poly (A) polymerase - Anaplasma
marginale (strain St. Maries)
Length = 419
Score = 70.5 bits (165), Expect = 4e-11
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 8/236 (3%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
V F+GD + R+ ED+LRI+R FRF+ I K EE + + L +S ERI
Sbjct: 146 VVFIGDAEARINEDFLRILRVFRFHASICDK-SPLSEEIIFLCNKYADSLAKLSRERIRS 204
Query: 530 ELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAALV 351
E K+L + LK M GV + P + L H +P++ LAA++
Sbjct: 205 EFFKLLACTNCASTLKIMEGCGV-LHQVVPYPVQIGRLSC----THLAGRAPITKLAAIL 259
Query: 350 K-----DLD-EVTVLHSRMKFSKLERDLL-YFLVEHRDDKVSDRPMKPYESLILNTSMKQ 192
K D+ V L + ++ S+ E+ LL L + +S + Y + + +
Sbjct: 260 KGYAHTDMSGTVEGLEALLRLSRKEKKLLETLLTTNLPFPLSTTQQQKYLNDLGTDVYRD 319
Query: 191 KVAIEYV-REVLKYRGDEELLKRLDNWEIPRFPVSGKTLKECGXPVGKMYGRXIKK 27
V + ++ +E L E L+ + PVSGK L + G GK+ G +K+
Sbjct: 320 LVIVSFLSKETLSASAFLEHLEYTKQFAPLSLPVSGKDLAKLGYKEGKLLGHTLKR 375
>UniRef50_Q8FZD7 Cluster: PolyA polymerase family protein; n=13;
Rhizobiales|Rep: PolyA polymerase family protein -
Brucella suis
Length = 423
Score = 69.3 bits (162), Expect = 9e-11
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 17/242 (7%)
Frame = -1
Query: 704 FVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGEL 525
F+GD + R++EDYLRI+R+FRF+ E E LR G+ +S ERIW E+
Sbjct: 156 FIGDAEQRIREDYLRILRFFRFFAWYG--SGRPEAEGLRASARLKDGIAQLSAERIWSEM 213
Query: 524 KKILQGNFAGNLLKTMLNVGVGEYMGFPLSP--NVQELDMLLKRAHHL--NLSPLSYLAA 357
KK+L L M GV + P S + + L++ L PL L +
Sbjct: 214 KKLLGAPDPSRALLWMRQAGVLNLV-LPESEKWGIDAIHGLVRTQSDLGWQADPLLRLES 272
Query: 356 LV-KDLDEVTVLHSRMKFSKLERDLL--YFLVEHRDDKVSDRPMKP----------YESL 216
LV D + L RMK S ER L + + +S++ +K + +
Sbjct: 273 LVPPDAVRMEELGKRMKMSNAERARLEAWARADAVKPGLSEQALKKAIYRGSKQALLDRI 332
Query: 215 ILNTSMKQKVAIEYVREVLKYRGDEELLKRLDNWEIPRFPVSGKTLKECGXPVGKMYGRX 36
L + ++ A+ +++ G LL ++++ P FP++G L G G G
Sbjct: 333 RLAYAAARQEAVGSDEAMIRAGGVARLLDAAEHYDAPVFPITGGDLLARGIEKGPGLGET 392
Query: 35 IK 30
++
Sbjct: 393 LR 394
>UniRef50_Q1GRA3 Cluster: Polynucleotide adenylyltransferase region;
n=5; Sphingomonadales|Rep: Polynucleotide
adenylyltransferase region - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 398
Score = 68.1 bits (159), Expect = 2e-10
Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 7/237 (2%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRF---YGXIALKPDNHEEETLRVLXNNVHGLGNIS 549
+ RVAF+GD R+ ED+LRI+R++RF +G L P +H + L ++S
Sbjct: 148 RGRVAFIGDAASRIAEDHLRILRFYRFAARFGRGDLDPASH-----AAVVAARQSLKSLS 202
Query: 548 GERIWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPN-VQELDMLLKRAHHLNLSP- 375
ERI EL KIL ++ M G+ + L LD L P
Sbjct: 203 RERIADELAKILALPDPRAIVAQMHADGILAVLLPELDAGFAAALDRLFANEAVAGAVPA 262
Query: 374 -LSYLAALV-KDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTS 201
L LAAL+ D+ + SR++ S +R L L HR D RP++
Sbjct: 263 ALRRLAALLPADVAIAEQVASRLRLSTRQRKHLAALGGHRHDVA--RPVR---------Q 311
Query: 200 MKQKVAIEYVREVLKYRGDEELLKRLDNWEIPRFPVSGKTLKECGXPVGKMYGRXIK 30
+ + IE R+V GD L+ L +W++P PV G + G G R +K
Sbjct: 312 LAYAIGIEAARDVHLLAGDPAALRTLSDWQVPMLPVKGGDIVARGIAAGPEVARILK 368
>UniRef50_A0NYQ1 Cluster: Poly(A) polymerase; n=1; Stappia aggregata
IAM 12614|Rep: Poly(A) polymerase - Stappia aggregata
IAM 12614
Length = 414
Score = 68.1 bits (159), Expect = 2e-10
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 10/237 (4%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
V F+GDPD R++EDYLRI+R+FR Y A + + + L GL ++S ERI
Sbjct: 155 VRFIGDPDTRIREDYLRILRFFRIYA--AYGAGDMDADGLGACLRQRDGLRHLSAERIGH 212
Query: 530 ELKKILQGNFAGNLLKTMLNVGVGEYM--GFPLSPNVQELDMLLKRAHHLNLSPLSYLAA 357
E++++L+ A LK + + G+ E G + L L A + L +
Sbjct: 213 EMRRLLRAPLAATALKLLNDCGLWEIATGGLARIEDYLALRSLEGSASEVTDPELGLVVL 272
Query: 356 LVKDLDEVTVLHSRMKFSKLERDLLYFL-VEHRDDKVSDRPMKPYESLILNTSMKQKV-- 186
++V + R++ S ERD + R + +D+ + E ++ + +
Sbjct: 273 TGFVREDVERVCDRLRLSNAERDRMRTAWAAMRCLRQADK-LPEAEDMVYQFGRQGAIDG 331
Query: 185 ---AIEYVREVLKYRGD--EELLKRLDNWEIPRFPVSGKTLKECGXPVGKMYGRXIK 30
+R K GD LL RL +P+FP+ G L G G+ G +K
Sbjct: 332 LLGRWAGLRAQGKDPGDAFAGLLDRLREVPVPQFPIKGADLIAAGHAPGRALGDSLK 388
>UniRef50_A4EGY8 Cluster: PolyA polymerase family protein; n=2;
Rhodobacteraceae|Rep: PolyA polymerase family protein -
Roseobacter sp. CCS2
Length = 378
Score = 64.9 bits (151), Expect = 2e-09
Identities = 39/120 (32%), Positives = 62/120 (51%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
R+ F+ D D R+KEDYLRI+R+FRFY D + + L +N+ GL ++S ERI
Sbjct: 148 RIRFIEDADRRIKEDYLRILRFFRFYAWYGDVNDGPDVDGLAACADNIEGLQSLSVERIT 207
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAAL 354
E+ K+L L +M + G + P + + L+++ + +PL LA L
Sbjct: 208 AEMLKLLAAPDPAPALASMTSTGALAQVLPGAEPGSLAVLIHLEQSLTIAPNPLRRLAVL 267
>UniRef50_A3UG83 Cluster: Probable poly(A) polymerase; n=1;
Oceanicaulis alexandrii HTCC2633|Rep: Probable poly(A)
polymerase - Oceanicaulis alexandrii HTCC2633
Length = 408
Score = 64.5 bits (150), Expect = 3e-09
Identities = 72/242 (29%), Positives = 101/242 (41%), Gaps = 13/242 (5%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRF---YGXIALKPDNHEEETLRVLXNNVHGLGNISGE 543
RV F+G+ D R+ ED LRI+R++RF YG AL P+ H GL ++ E
Sbjct: 151 RVVFIGEADERLAEDVLRILRFYRFNAWYGS-ALDPEGH-----AACVRAAPGLKALARE 204
Query: 542 RIWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLK-----RAHHLNLS 378
R+W ELK +L G ++K M V E P+ P +L++LL R
Sbjct: 205 RVWKELKTLLAAPDPGPVVKAMQEGHVFE----PVWPERLDLNLLLSIINADRGKGRAPD 260
Query: 377 PLSYLAALV-KDLDEVTVLHSRMKFSKLERD-LLYFLVEHRDDKVSDRPMKPYESLILNT 204
L AAL D+ V L +MK S E D L+ D S RP +
Sbjct: 261 TLIRAAALCGGDVTTVRSLGHQMKASNAETDRLIAMCAPAADGADSVRPGAEARARRRAL 320
Query: 203 SMKQKVAIEYVREVLKYRGDEELLKRLD---NWEIPRFPVSGKTLKECGXPVGKMYGRXI 33
+ + RG+ E LD +W P PV+G+ L G G G +
Sbjct: 321 YTLGAQTFSDRMRLAEARGEGEADADLDAAAHWRKPDLPVTGRDLIALGFEPGPQLGAVM 380
Query: 32 KK 27
K+
Sbjct: 381 KQ 382
>UniRef50_Q1GCJ3 Cluster: Polynucleotide adenylyltransferase region;
n=23; Rhodobacterales|Rep: Polynucleotide
adenylyltransferase region - Silicibacter sp. (strain
TM1040)
Length = 386
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
RV F+GD R++EDYLRI+RYFRF+ + E L + GL ++S ER+
Sbjct: 147 RVRFIGDATRRIQEDYLRILRYFRFHSWYGDAEAGFDPEALAAIAATQEGLDHLSRERVG 206
Query: 533 GELKKILQGNFAGNLLKTMLNVGV 462
E+ K+L + + TM +GV
Sbjct: 207 AEIMKLLSSSNPAPSVATMRQIGV 230
>UniRef50_Q9AB26 Cluster: Poly A polymerase family protein; n=3;
Alphaproteobacteria|Rep: Poly A polymerase family
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 413
Score = 63.3 bits (147), Expect = 6e-09
Identities = 65/240 (27%), Positives = 100/240 (41%), Gaps = 11/240 (4%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIAL-KPDNHEEETLRVLXNNVHGLGNISGERI 537
RV FVGDP R++EDYLRI+R+FRF +PD + L V G + ER
Sbjct: 150 RVVFVGDPMTRIREDYLRILRFFRFQAWYGRGEPDQKGLAACKALKGMVSGR---AAERT 206
Query: 536 WGELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDML--LKRAHHLNLSPLSYL 363
EL K+L + + M V + P ++ + L ++ P L
Sbjct: 207 QKELMKMLAADDPRPAFRLMAATSVLSSI-LPSVKSLARFEALVGIETEQLFENDPDLRL 265
Query: 362 AALVKDLDEVT-VLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMKQKV 186
AAL+ D +V L R++ RD L V VS M P E+ + +
Sbjct: 266 AALIPDDPKVAEQLAERLRLPNNVRDRLVEAVGKNPRVVS--WMSPREARRAVYGLGTRT 323
Query: 185 AIEYVREVLKYRGDEE-------LLKRLDNWEIPRFPVSGKTLKECGXPVGKMYGRXIKK 27
+ ++ G + LL + W P FP+SG+ + + G P G M G +++
Sbjct: 324 FCDRIKLAWAGSGRDSTAPQWRALLALAETWNPPAFPLSGEEVMKAGVPKGPMVGEVMRE 383
>UniRef50_A5CCR6 Cluster: PolyA polymerase; n=1; Orientia
tsutsugamushi Boryong|Rep: PolyA polymerase - Orientia
tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 402
Score = 62.9 bits (146), Expect = 8e-09
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 10/226 (4%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
RV F+GD D R++ED LRI+R+FRF A D +E + + L +S ER+
Sbjct: 150 RVIFIGDSDTRIQEDVLRILRFFRFSSYYARSID---QEGYQSCAKHAKSLTILSKERVI 206
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNV---QELDMLLKRAHHL-NLSPLSY 366
EL KI+ A L M + + Y+G L N+ + + + K+ L N+ L
Sbjct: 207 QELSKIIISPNAYETLVKMAEINITYYIGLRLKLNLPVFKNVTTIAKKKSILPNVIVLYS 266
Query: 365 LAALVKDLDEVTVLHSRMKFSK-LERD---LLYFLVEHRDDKVSDRPMKPYESLILNTSM 198
+ D+ ++ + S ++FSK + R L F E + K + + + N
Sbjct: 267 VLLSSNDVQDLKEILSNLRFSKAMIRKIVRLCIFFSECQSKNALFLIRKYWLTRVDNIDD 326
Query: 197 KQKVAIEYVREVLKYRGDEE--LLKRLDNWEIPRFPVSGKTLKECG 66
+A+ +L DEE + K+ IP+ PVSG LKE G
Sbjct: 327 YVNLAL-----LLGCISDEEANMFKQQVYELIPKLPVSGSDLKELG 367
>UniRef50_Q92JQ2 Cluster: Poly(A) polymerase [EC:2.7.7.19]; n=14;
Rickettsia|Rep: Poly(A) polymerase [EC:2.7.7.19] -
Rickettsia conorii
Length = 436
Score = 62.5 bits (145), Expect = 1e-08
Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 10/222 (4%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
+V F+G+ R+KEDYLRI+R+FRF A + D+ + + L + GL +S ERI
Sbjct: 198 KVVFIGEALDRIKEDYLRILRFFRFSSYYANQLDDGNFKACKALKD---GLKTLSRERIK 254
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDM-LLKRAHHLNLSPLSYLAA 357
E+ KI+ A +LK M +G+ E L ++Q ++ ++A+ L ++ A
Sbjct: 255 SEMDKIIVSKRAAQILKAMFEIGILE-----LIFSIQNYEIKFFEQANDFKLELVTRYAL 309
Query: 356 LV---KDLDEVTVLHSRMKFSKLERDLLYFLVEHRDD-KVSDRPM----KPYESLILNTS 201
L+ KDL+ L KFSK E + + +D K + + + K Y+ +L
Sbjct: 310 LLYCQKDLNLKVFLD--WKFSKHEAMQILSITNFLNDAKFNMKKIWFEKKNYKEYLLAAR 367
Query: 200 MKQKVAIEYVRE-VLKYRGDEELLKRLDNWEIPRFPVSGKTL 78
+ K+ V+E +LKY + LL+ P+F V+G L
Sbjct: 368 IIGKLNHSQVKEFILKY---DALLR-------PKFQVNGNDL 399
>UniRef50_Q2RXH4 Cluster: Polynucleotide adenylyltransferase region;
n=1; Rhodospirillum rubrum ATCC 11170|Rep:
Polynucleotide adenylyltransferase region -
Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Length = 525
Score = 56.4 bits (130), Expect = 7e-07
Identities = 37/101 (36%), Positives = 50/101 (49%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
V F+G P R+ EDYLRI+R+FRF+ P + + L GL +S ER+
Sbjct: 220 VRFIGRPMDRIAEDYLRILRFFRFHARFGRPP--ADPDALSACAAQAAGLDRLSAERVRS 277
Query: 530 ELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDML 408
EL KIL +L M V V E + P + +V L ML
Sbjct: 278 ELLKILDTADPAGVLMAMRGVHVLERV-LPEAGDVTNLRML 317
>UniRef50_Q0FDP1 Cluster: Poly A polymerase family protein; n=1;
alpha proteobacterium HTCC2255|Rep: Poly A polymerase
family protein - alpha proteobacterium HTCC2255
Length = 383
Score = 56.0 bits (129), Expect = 9e-07
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K V F+ DP+ R+ EDYLRI+R+FRF + E L N+ G+ ++ ER
Sbjct: 145 KRHVRFIKDPNKRIIEDYLRILRFFRFTAEYGDPDLGIDAEGLSACAANIDGIALLAKER 204
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGV 462
+ E++KIL+ ++L M G+
Sbjct: 205 VGSEIRKILKTQNPSSVLAAMEISGI 230
>UniRef50_Q89SD1 Cluster: Poly(A) polymerase; n=11;
Bradyrhizobiaceae|Rep: Poly(A) polymerase -
Bradyrhizobium japonicum
Length = 418
Score = 54.8 bits (126), Expect = 2e-06
Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 9/236 (3%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXI-ALKPDNHEEETLRVLXNNVHGLGNISGERI 537
RV F+GDPD R+ EDYLRI+R+FR + A +PD + L + GL ++S ER+
Sbjct: 152 RVRFIGDPDQRIAEDYLRILRFFRIHAAFGAGEPD--RDGYLACIRGRA-GLASLSAERV 208
Query: 536 WGELKKILQGNFAGNLLKTMLNVGVGEYM--GFPLSPNVQELDMLLKRAHHLNLSPLSYL 363
E+ K+L A + M G+ + + G + + + + ++R L S L
Sbjct: 209 RMEMLKLLVAGGASAAVLAMAEGGLLQALIGGVAYTGPLASM-VAIERELGLPASVTRRL 267
Query: 362 AAL-VKDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMKQ-- 192
AAL V ++ + +R++ S E L + HR + + + L+ ++
Sbjct: 268 AALTVAVTEDAKRVATRLRLSNAEAKALDSM-GHRWWRFATKDEANARRLLYRLGAERYH 326
Query: 191 -KVAIEYVREVLKYRGD--EELLKRLDNWEIPRFPVSGKTLKECGXPVGKMYGRXI 33
+V + + R EL + W P+FP+ G G G +
Sbjct: 327 DRVLLGWARAAGDVHSSRWRELAELPQRWTAPKFPLRAADFIARGMAEGPALGHVL 382
>UniRef50_A0NJB1 Cluster: Polynucleotide adenylyltransferase; n=2;
Oenococcus oeni|Rep: Polynucleotide adenylyltransferase
- Oenococcus oeni ATCC BAA-1163
Length = 399
Score = 54.4 bits (125), Expect = 3e-06
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 8/238 (3%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K + VGD R ED LRI+R FRF + K EEETLR L +I+ ER
Sbjct: 143 KKIIRTVGDAKQRFSEDALRILRAFRFSSQLDFKI---EEETLRASQMIKENLNDIATER 199
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYM-GFPLSPNVQELDM----LLKRAHHLNLSP 375
I+ E K+L G L+ M ++G+ +++ G L + +L + + +N +
Sbjct: 200 IFVEFSKLLAGKNPQRSLRQMYDLGIVDFLPGHKLITDQSDLFRNYIGIQSSSDAINWTR 259
Query: 374 LSYLAALVKDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMK 195
+ + L ++ L S ++L++ + + D KP + + + ++
Sbjct: 260 FIFFSNL-RESSLTKYLGSWKMSNQLKKQIFKSINLLEKD-------KPSKLDLFDAGLE 311
Query: 194 QKVAIEYVREVLKYRGDEELLKRLDN---WEIPRFPVSGKTLKECGXPVGKMYGRXIK 30
+A+ +K LL +N ++ ++G LK G PVG +YG+ I+
Sbjct: 312 ISIAL----SAIKRDDRNNLLSDYENLAIHDLSELDINGIDLKNIGIPVGPIYGKIIE 365
>UniRef50_Q44038 Cluster: ORFIII; n=1; Acidaminococcus
fermentans|Rep: ORFIII - Acidaminococcus fermentans
Length = 256
Score = 54.0 bits (124), Expect = 4e-06
Identities = 30/80 (37%), Positives = 42/80 (52%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VGDPD R ED LR+ R RF G + PD L + N+ + +S ER+ EL
Sbjct: 66 VGDPDRRFSEDALRMFRACRFVGQLGFAPD---PAILPAIGRNLQKVPGLSLERVRTELN 122
Query: 521 KILQGNFAGNLLKTMLNVGV 462
K+L G +AG + M+ G+
Sbjct: 123 KLLMGTYAGEGMDLMVKSGL 142
>UniRef50_Q0C5B7 Cluster: TRNA nucleotidyltransferase/poly(A)
polymerase family protein; n=1; Hyphomonas neptunium
ATCC 15444|Rep: TRNA nucleotidyltransferase/poly(A)
polymerase family protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 381
Score = 53.6 bits (123), Expect = 5e-06
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
RV F+G+ D R+ EDYLRI+R++RF D E+ GL I+ ERIW
Sbjct: 133 RVIFIGEGDQRLIEDYLRILRFYRFNAWYGAGID---EDGQGACARQREGLRKIAAERIW 189
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAAL 354
ELK+ L + M GV E + S + ++ A+ L P+ L AL
Sbjct: 190 KELKRTLAAPDPAPAMAAMEEAGVLEILLPGASAALLPGLAAVEAANGLAPDPMQRLMAL 249
Query: 353 V-KDLDEVTVLHSRMKFSKLE 294
+ + +VT + ++ S E
Sbjct: 250 LPRRQRDVTDAANALRLSNQE 270
>UniRef50_Q0BRM1 Cluster: Poly(A) polymerase; n=2;
Acetobacteraceae|Rep: Poly(A) polymerase - Granulobacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Length = 413
Score = 52.4 bits (120), Expect = 1e-05
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 5/224 (2%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEE--TLRVLXNNVHGLGNISGER 540
RV FVG RV ED LR +R+FRF E + ++ + L +S ER
Sbjct: 148 RVRFVGQAGRRVAEDRLRALRFFRFQARYGRWEQGTEPDAAAMQAITAMAGELTQLSAER 207
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYM---GFPLSPNVQELDMLLKRAHHLNLSPLS 369
+W EL++IL G +L M GV + G+ +P V+ + + L +
Sbjct: 208 VWSELRRILTGPHLAAILAAMEQTGVLPVLFPAGYDPAPLVEAVANGMP-GEGLAEEAIP 266
Query: 368 YLAALVKDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMKQK 189
LA LV + L R++ S E L ++ V D L +
Sbjct: 267 RLALLVGAKEPPRALAERLRLSGQEAGRLTTCLD-GSVPVWDGAADMVSLRRLLADDPAQ 325
Query: 188 VAIEYVREVLKYRGDEELLKRLDNWEIPRFPVSGKTLKECGXPV 57
I+ +L+ L + L P FP++G+ L G V
Sbjct: 326 ALIDRAWVMLRDERAAHLTRLLTPLSRPNFPLAGRDLLAAGLAV 369
>UniRef50_A5NWU9 Cluster: Polynucleotide adenylyltransferase region;
n=3; Alphaproteobacteria|Rep: Polynucleotide
adenylyltransferase region - Methylobacterium sp. 4-46
Length = 418
Score = 52.4 bits (120), Expect = 1e-05
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
RV F+GDP R++EDYLRI+R+FRF+ P + + + GL +S ER+
Sbjct: 152 RVRFIGDPAQRIREDYLRILRFFRFHARYGRGPLDPAGLAAAIAARD--GLATLSRERVR 209
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLK-RAHHLNLSPLSYLAA 357
E+ K++ A ++ M G+ + L + +L L + R+ P+ LAA
Sbjct: 210 VEMLKLVAAPGAPEVVAVMSATGLLQ----RLLGGIGDLGRLARLRSRDDPPDPVRRLAA 265
Query: 356 L-VKDLDEVTVLHSRMKFSKLE 294
L V+ + L ++ SK E
Sbjct: 266 LAVQSEADADRLREGLRLSKAE 287
>UniRef50_Q2VZL3 Cluster: TRNA nucleotidyltransferase/poly(A)
polymerase; n=3; Magnetospirillum|Rep: TRNA
nucleotidyltransferase/poly(A) polymerase -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 435
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
RV FVG+P+ R++ED LR++R+FRF+ + E L L +SGER+
Sbjct: 162 RVRFVGEPEKRIEEDALRLLRFFRFHAHYG-RGIAMETRALNACRRMADRLKGLSGERVA 220
Query: 533 GELKKIL 513
GEL ++L
Sbjct: 221 GELVRLL 227
>UniRef50_Q1VLB3 Cluster: PolyA polymerase family protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: PolyA polymerase
family protein - Psychroflexus torquis ATCC 700755
Length = 248
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = -1
Query: 704 FVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNH-EEETLRVLXNNVHGLGNISGERIWGE 528
FVGD R++ED+LR++R RF IA PD + + L ++H L ++S ERI E
Sbjct: 161 FVGDAACRLQEDHLRLLRALRF---IACYPDLYMPAPDQKALEAHIHLLSSLSAERIASE 217
Query: 527 LKKILQGNFAGNLLKTMLNVGV 462
L+K++ G A +L+ ++G+
Sbjct: 218 LRKLMAGPAALAVLRQAADMGI 239
>UniRef50_Q2B3W5 Cluster: TRNA nucleotidyltransferase; n=1; Bacillus
sp. NRRL B-14911|Rep: TRNA nucleotidyltransferase -
Bacillus sp. NRRL B-14911
Length = 400
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/88 (34%), Positives = 47/88 (53%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
R+A VG+P R ED LR+MR RF ++ + D ET L + + L I+ ER
Sbjct: 144 RIATVGNPLERFYEDALRMMRAVRFASQLSFQIDG---ETYEALVSEAYLLEKIAVERKL 200
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYM 450
E +K+L G + LK M + G+ +++
Sbjct: 201 AEFEKLLAGENSFMALKIMADTGLSQHL 228
>UniRef50_Q7P2R0 Cluster: POLY(A) POLYMERASE; n=3; Fusobacterium
nucleatum|Rep: POLY(A) POLYMERASE - Fusobacterium
nucleatum subsp. vincentii ATCC 49256
Length = 451
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/85 (36%), Positives = 42/85 (49%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
+ FVG + R+ ED LR++R FRF + + E T+ + L NIS ERI
Sbjct: 152 INFVGKSEERIIEDPLRVLRAFRFMSRLNF---SLSENTIEAIKKQKELLKNISEERITM 208
Query: 530 ELKKILQGNFAGNLLKTMLNVGVGE 456
E K+L G N L M + GV E
Sbjct: 209 EFSKLLLGKNIKNTLTLMKDTGVLE 233
>UniRef50_A3VV21 Cluster: Possible poly(A) polymerase; n=1;
Parvularcula bermudensis HTCC2503|Rep: Possible poly(A)
polymerase - Parvularcula bermudensis HTCC2503
Length = 398
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
RV F+G P R+KEDYLRI+R+ RF D + L GL ++S ERIW
Sbjct: 152 RVRFIGRPAQRIKEDYLRILRFMRFSARFGGTLDVAGWQASEALAG---GLLHLSKERIW 208
Query: 533 GELKKI 516
E+ ++
Sbjct: 209 SEVSRL 214
>UniRef50_Q5FU27 Cluster: Poly(A) polymerase/t-RNA
nucleotidyltransferase; n=1; Gluconobacter oxydans|Rep:
Poly(A) polymerase/t-RNA nucleotidyltransferase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 396
Score = 47.6 bits (108), Expect = 3e-04
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRF---YGXIALKPDNHEEETLRVLXNNVHGLGNISGE 543
RV FVGD R+ ED LR +R+FRF YG PD + + + + +G +S E
Sbjct: 147 RVRFVGDASRRIAEDALRALRFFRFDARYGHGV--PD---RKACQAVSEQLGLIGTLSAE 201
Query: 542 RIWGELKKILQGNFAGNLLKTMLNVGV 462
R+ EL +IL G + M +VG+
Sbjct: 202 RVASELLRILSGPRLNETIGAMASVGL 228
>UniRef50_A6CRX0 Cluster: tRNA nucleotidyltransferase; n=1; Bacillus
sp. SG-1|Rep: tRNA nucleotidyltransferase - Bacillus sp.
SG-1
Length = 395
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VG D R KED LR+MR RF + K +N +T + N + L I+ ER+ E +
Sbjct: 147 VGSADERFKEDALRMMRAVRFMAQLGFKMEN---DTFESIKRNGNTLKYIAVERLSAEFE 203
Query: 521 KILQGNFAGNLLKTMLNVGVGEYM 450
K+L G F +++ G+ +++
Sbjct: 204 KLLGGRFKKASFESLSETGLYQFL 227
>UniRef50_A0UUV7 Cluster: Metal dependent phosphohydrolase; n=1;
Clostridium cellulolyticum H10|Rep: Metal dependent
phosphohydrolase - Clostridium cellulolyticum H10
Length = 448
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/69 (40%), Positives = 37/69 (53%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K + VGDP+ R +ED LR+MR RF + + EE T + +N + NIS ER
Sbjct: 143 KRIIKAVGDPEQRFREDALRMMRAIRFSAQLGFE---IEEATFEAIKSNSALIANISSER 199
Query: 539 IWGELKKIL 513
I EL K L
Sbjct: 200 IRDELNKTL 208
>UniRef50_Q41GT8 Cluster: Polynucleotide adenylyltransferase; n=1;
Exiguobacterium sibiricum 255-15|Rep: Polynucleotide
adenylyltransferase - Exiguobacterium sibiricum 255-15
Length = 421
Score = 46.8 bits (106), Expect = 5e-04
Identities = 31/87 (35%), Positives = 42/87 (48%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
V VG + R ED LR++R FRF + D ET R + N L +++ ERI
Sbjct: 179 VRTVGRAEDRFDEDALRMIRAFRFMSQLEFTLD---PETERAIENKKQHLSSVAVERIAI 235
Query: 530 ELKKILQGNFAGNLLKTMLNVGVGEYM 450
E +K+L G L M G+G YM
Sbjct: 236 EFEKLLLGPGRKAALAAMRRTGIGHYM 262
>UniRef50_Q0TV45 Cluster: PolyA polymerase family protein; n=3;
Clostridium perfringens|Rep: PolyA polymerase family
protein - Clostridium perfringens (strain ATCC 13124 /
NCTC 8237 / Type A)
Length = 424
Score = 46.4 bits (105), Expect = 7e-04
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VGDPD R ED LR++R RF + K + E++R N + NIS ERI E
Sbjct: 145 VGDPDKRFSEDALRMLRAIRFSCQLNFKIEKLTAESIR---KNFKLIKNISMERIQSEFT 201
Query: 521 KILQGNFAGNLLKTMLNVGVGEYM 450
KI+ N L + +G +++
Sbjct: 202 KIILSNDPDRGLMLLRKLGFSDFL 225
>UniRef50_A0LF07 Cluster: Polynucleotide adenylyltransferase region;
n=1; Syntrophobacter fumaroxidans MPOB|Rep:
Polynucleotide adenylyltransferase region -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 427
Score = 46.4 bits (105), Expect = 7e-04
Identities = 27/75 (36%), Positives = 41/75 (54%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VGD R +ED LR++R FRF + L + E T + +GL ++GER+ E+
Sbjct: 138 VGDAGRRFREDPLRVLRVFRFVSELGL---DVEPGTCAAARSEANGLAAVAGERVREEVF 194
Query: 521 KILQGNFAGNLLKTM 477
+IL G A + L+ M
Sbjct: 195 RILSGGNAVSALRLM 209
>UniRef50_Q3XW94 Cluster: Polynucleotide adenylyltransferase; n=1;
Enterococcus faecium DO|Rep: Polynucleotide
adenylyltransferase - Enterococcus faecium DO
Length = 249
Score = 46.0 bits (104), Expect = 0.001
Identities = 30/66 (45%), Positives = 35/66 (53%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VG+P R ED LR+MR RF + K EEET + N LG IS ERI E
Sbjct: 149 VGNPHERFHEDALRMMRGLRFVSQLGFKL---EEETFYAIKENHELLGKISVERINVEFI 205
Query: 521 KILQGN 504
K+L GN
Sbjct: 206 KMLLGN 211
>UniRef50_Q2LST9 Cluster: Poly A polymerase; n=1; Syntrophus
aciditrophicus SB|Rep: Poly A polymerase - Syntrophus
aciditrophicus (strain SB)
Length = 495
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/82 (32%), Positives = 43/82 (52%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VG PD R ED LR++R RF +A E+ETL + + + +S ER+ EL
Sbjct: 193 VGRPDERFAEDRLRMLRAVRFAANLAFSV---EQETLEAIQAHAPEIQEVSVERVADELT 249
Query: 521 KILQGNFAGNLLKTMLNVGVGE 456
++L AG ++ ++ G+ E
Sbjct: 250 RLLTLGGAGEGMRLLMKTGLLE 271
>UniRef50_Q1EZ98 Cluster: HDIG; n=1; Clostridium oremlandii
OhILAs|Rep: HDIG - Clostridium oremlandii OhILAs
Length = 450
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/67 (38%), Positives = 36/67 (53%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
++ VG+P R EDYLR++R RF + + + +R L H +G IS ERI
Sbjct: 149 KIKTVGNPLERFSEDYLRMLRAVRFSAQLDYTLEERTFQGIRALS---HNIGKISTERIR 205
Query: 533 GELKKIL 513
EL KIL
Sbjct: 206 EELNKIL 212
>UniRef50_Q1ASB2 Cluster: Polynucleotide adenylyltransferase region;
n=1; Rubrobacter xylanophilus DSM 9941|Rep:
Polynucleotide adenylyltransferase region - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 510
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIAL--KPDNHEEETLRVLXNNVHGLGNISGERIWGE 528
VGDP R++ED LR++R RF ++ KP + R + N L +IS ERI E
Sbjct: 154 VGDPLERMREDPLRMLRAVRFVATLSTPEKPFEMTADLERAIRENARWLESISAERIREE 213
Query: 527 LKKILQGNFAGNLLKTMLNVGVGEYM 450
+IL L+ ++ +G+ Y+
Sbjct: 214 FDRILLSPNPALGLRALVRLGLMRYV 239
>UniRef50_Q1LJ89 Cluster: Poly(A) polymerase; n=1; Ralstonia
metallidurans CH34|Rep: Poly(A) polymerase - Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
Length = 529
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
+GDP R +ED +R++R RF D+H E + L + +H N+ R++ E+
Sbjct: 210 IGDPVTRYREDPVRMLRVVRFAAKTGFSIDDHTREPIVGLASLIH---NVPSARLFDEML 266
Query: 521 KILQGNFAGNLLKTMLNVGV 462
K+L A L+ + G+
Sbjct: 267 KLLMSGHAWASLQELRKAGL 286
>UniRef50_A5Z8C9 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Eubacterium ventriosum ATCC 27560
Length = 457
Score = 43.6 bits (98), Expect = 0.005
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VG+P+ R ED LRI+R RF + D E+T+ + L NIS ERI EL+
Sbjct: 154 VGEPEERFGEDALRILRAVRFSAQLGFDID---EKTMEAIKKLAPTLENISAERIKTELE 210
Query: 521 KILQGNFAGNLLKTMLNVGV 462
K++ L+ T N G+
Sbjct: 211 KLIISKNPCKLI-TAYNAGI 229
>UniRef50_Q7TVB1 Cluster: TRNA nucleotidyltransferase/poly(A)
polymerase; n=2; Prochlorococcus marinus|Rep: TRNA
nucleotidyltransferase/poly(A) polymerase -
Prochlorococcus marinus
Length = 415
Score = 43.2 bits (97), Expect = 0.007
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 8/222 (3%)
Frame = -1
Query: 674 EDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELKKILQGNFAG 495
+D LRI+R R + LK ++ E L+ N L ++ ERI EL++++QG +A
Sbjct: 166 DDPLRILRGLRLVSELNLKLESQTESLLK---KNAGLLNRVASERIKVELERLVQGPWAN 222
Query: 494 NLLKTMLNVGVGEYMGFPLSPNVQELDML-LKRAHHLNLSPLSYLAALVKDLDEVTVLHS 318
+++ ++ +G+ + LS N + L LK L LV+ L + +
Sbjct: 223 DVIPLVIKMGL--LRPWSLSNNEEYFHSLSLKNVSSFTAKELKIALPLVR-LSNLLSVEG 279
Query: 317 RMK--FSK--LERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMKQKV-AIEYVREVLKY 153
+K FSK ++ L + R+D +S R + + L L+ ++ + A+ + + +
Sbjct: 280 LVKLGFSKKTIKSCNLLKNWQKRNDGLSFRGLNEVDRLQLHIDLENHLPALILMLQTIDQ 339
Query: 152 RGDEELLKRL-DNWEIPRFPVSGKTLKEC-GXPVGKMYGRXI 33
+ E + L D P P+ G TLK+ P G G I
Sbjct: 340 KIWLERWRDLSDPLFHPSSPIDGNTLKDTFDAPEGPWIGALI 381
>UniRef50_Q6MEY5 Cluster: Putative poly A polymerase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative poly A polymerase - Protochlamydia amoebophila
(strain UWE25)
Length = 412
Score = 42.7 bits (96), Expect = 0.009
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGL-GNISGERIWGEL 525
+G+P R +ED LR++R FRF E ET + + N L ++ ERIW E
Sbjct: 143 IGNPHERFQEDRLRMLRAFRFSARFGFA---IELETQQAIFENAEQLFPAVAIERIWQEF 199
Query: 524 KKI-LQGNFAGNLLK----TMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLA 360
KK+ + F +++ T+L+V E G P++ ++ L KR N + + YL
Sbjct: 200 KKMAMYPCFDQAIVEMHRLTLLDVIFPELKGLPIN-ELRHLVEAYKR-FPKNCATIFYLI 257
Query: 359 ALVKDL--DEVTVLHSRMKFSKLERDLLYFLVE-----HRDDKVSDRPMKPYESLILNTS 201
L+ L +E + R+K + + LL++ + ++ + + P+ + N
Sbjct: 258 VLMPRLNREEKIEVAKRLKVTNRDLKLLHYFEDLNQLIKKEKENGLEDLYPWAHALANPD 317
Query: 200 MKQKVAIEYVREVLKYRGDEELLKRLDN 117
+ +E + ELL +L N
Sbjct: 318 F--SIVVEVIAATFPLNKGNELLIQLKN 343
>UniRef50_Q126S3 Cluster: Poly(A) polymerase; n=9;
Burkholderiales|Rep: Poly(A) polymerase - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 550
Score = 42.7 bits (96), Expect = 0.009
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K + +G+P VR +ED +RI+R RF ++ E++T L L ++ R
Sbjct: 212 KKIIRMIGNPAVRYREDPVRIIRAVRFGAKLSALGFKFEDKTSAPLREMSSLLADVPQSR 271
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHH--LNLS 378
++ E+ K+LQ + ++ + +G+G + +PL LD++++ AH LNL+
Sbjct: 272 LFDEMLKLLQTGHSLASVEQLKTLGLGTGI-YPL------LDVVVEAAHEPFLNLA 320
>UniRef50_A7DHD6 Cluster: Polynucleotide adenylyltransferase region;
n=2; Methylobacterium extorquens PA1|Rep: Polynucleotide
adenylyltransferase region - Methylobacterium extorquens
PA1
Length = 424
Score = 42.7 bits (96), Expect = 0.009
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
RV F+GD R++ED LR++R+FRF+ + E + + L +S ER+
Sbjct: 162 RVRFIGDAATRLREDALRLLRFFRFHARYGSGAPDAEGLAASIAARD--SLDRLSRERVR 219
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGFP-LSPNVQELDMLLKRAH-HLNLSPLSYLA 360
E K+L A + + + G+ P + V EL L + A L + A
Sbjct: 220 AEFLKLLLAPRAVDAVAILSETGL-----LPRILGGVGELGRLARCAEAEPRLDATARFA 274
Query: 359 AL-VKDLDEVTVLHSRMKFSKLE 294
AL V+ +++ L + ++ S+ E
Sbjct: 275 ALAVRTIEDADRLQASLRLSRAE 297
>UniRef50_Q9PLM2 Cluster: Poly(A) polymerase family protein; n=7;
Chlamydiaceae|Rep: Poly(A) polymerase family protein -
Chlamydia muridarum
Length = 410
Score = 42.3 bits (95), Expect = 0.012
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
V +G P R ED LRI+R RF + D E + ++ ++S ERIW
Sbjct: 142 VRAIGHPKQRFLEDKLRILRAIRFAATLGFSLDPKTE--IAIIKEAPSLPTSVSPERIWQ 199
Query: 530 ELKKIL-QGNFAGNLLKTMLNVGVGEYMGFPLSPN--VQELDMLLKRAHHLNLSPLSYLA 360
ELKK+L + + L L V + SP+ ++ +R ++ +++L
Sbjct: 200 ELKKMLRKAPYESLQLLIKLKVLPIIFPELKASPSGFLRSTIAFAQRIRDPHIPEIAFLL 259
Query: 359 ALVKDL--DEVTVLHSRMKFSKLERDLL 282
L +++ +E SR+K S E LL
Sbjct: 260 PLFQEVKQEEAIAAFSRLKVSNKELGLL 287
>UniRef50_Q7UWK0 Cluster: Poly A polymerase; n=1; Pirellula sp.|Rep:
Poly A polymerase - Rhodopirellula baltica
Length = 427
Score = 41.9 bits (94), Expect = 0.015
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K + +G R +ED LR++R RF + + E +T + N+ + +SGER
Sbjct: 167 KGHLRTIGKAVQRFEEDKLRMLRAVRFATTLGF---SIEYKTFAAIQNHASDISVVSGER 223
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPL-SPNVQELDMLLKRAHHLNLSPLSYL 363
I E+++++ + + L+T+++ G+ ++ L S N E ++ H + L
Sbjct: 224 IGAEMRRVMTSSASDFGLETLVDTGLALHVWPQLRSMNWTEYSRAIQTTKHRSFEVAMAL 283
Query: 362 AALVKDLDEV---TVLHSRMKFSKLERDLLYFLVEH 264
A D + +L + K S ER + + H
Sbjct: 284 ALFHLPGDSIQCLRLLFNDWKLSVAERRAIEAALTH 319
>UniRef50_Q1FP87 Cluster: TRNA adenylyltransferase; n=4;
Clostridiales|Rep: TRNA adenylyltransferase -
Clostridium phytofermentans ISDg
Length = 459
Score = 41.9 bits (94), Expect = 0.015
Identities = 27/67 (40%), Positives = 34/67 (50%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
++ VG D R ED LRI+R RF + E+ETL + L NIS ERI
Sbjct: 141 KIRCVGSADQRFDEDALRILRAVRFSAQLNF---TIEDETLAAIRLKALNLKNISAERIR 197
Query: 533 GELKKIL 513
EL K+L
Sbjct: 198 EELNKLL 204
>UniRef50_A7H723 Cluster: Poly(A) polymerase; n=2;
Anaeromyxobacter|Rep: Poly(A) polymerase -
Anaeromyxobacter sp. Fw109-5
Length = 548
Score = 41.5 bits (93), Expect = 0.020
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIA--LKPDNHEEETLRVLXNNVHGLGNISGER 540
R+A +GDP++R++ED +R++R RF + + PD T + + L + R
Sbjct: 196 RIATIGDPEIRMREDPVRLLRAVRFAARLGFIIAPD-----TFEAMRRHASELARCAPAR 250
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLA 360
+ E+ KIL+ + + + G + L+ ++ D +RA +L+ L L
Sbjct: 251 VLEEIFKILRCGGSARAFELLRASGALPVILPALAAALESWDTTGRRAFFAHLAALDRLV 310
Query: 359 ALVKDLDEVTVL 324
+++ + +L
Sbjct: 311 RSGEEVSDAVLL 322
>UniRef50_Q895R6 Cluster: Poly(A) polymerase; n=9; Clostridium|Rep:
Poly(A) polymerase - Clostridium tetani
Length = 451
Score = 41.1 bits (92), Expect = 0.027
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VGDP R ED LR++R RF + + + +E ++ L +N+ N+S ERI E
Sbjct: 154 VGDPLKRFSEDALRMIRGVRFSAQLDFNIEENTKEAIKKLSSNIK---NVSVERIREEFN 210
Query: 521 KIL 513
KIL
Sbjct: 211 KIL 213
>UniRef50_Q5ZVA2 Cluster: Poly(A) polymerase I; n=4; Legionella
pneumophila|Rep: Poly(A) polymerase I - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 436
Score = 41.1 bits (92), Expect = 0.027
Identities = 25/90 (27%), Positives = 45/90 (50%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
+ +GDP R +ED +R++R RF + N ET H + ++S R++
Sbjct: 174 IRIIGDPVTRYQEDPVRMLRAVRFSAKLQF---NLSPETKAPFPKISHLITHVSSSRLFD 230
Query: 530 ELKKILQGNFAGNLLKTMLNVGVGEYMGFP 441
E+ K+ Q A ++ K ++ G+ Y+ FP
Sbjct: 231 EITKLYQCGEAESVQKLLVEYGLFNYL-FP 259
>UniRef50_A4XLP3 Cluster: TRNA adenylyltransferase; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep: TRNA
adenylyltransferase - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 394
Score = 41.1 bits (92), Expect = 0.027
Identities = 33/85 (38%), Positives = 43/85 (50%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
V VG+P R ED LRI+R RF + D E + VL ++ L IS ERI
Sbjct: 140 VRCVGNPHERFFEDALRILRCIRFATQLNFSIDEKTFEGV-VLLKDL--LKKISKERINA 196
Query: 530 ELKKILQGNFAGNLLKTMLNVGVGE 456
EL KIL+ + +K + GVGE
Sbjct: 197 ELSKILRSKNSLYGIKLLYESGVGE 221
>UniRef50_A4J3L2 Cluster: Polynucleotide adenylyltransferase region
precursor; n=2; Peptococcaceae|Rep: Polynucleotide
adenylyltransferase region precursor - Desulfotomaculum
reducens MI-1
Length = 907
Score = 41.1 bits (92), Expect = 0.027
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = -1
Query: 674 EDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHG--LGNISGERIWGELKKILQGNF 501
ED RI+R RF + + E +TLR++ V + +S ER+WGELK IL+
Sbjct: 615 EDPTRILRAIRFEQRYDM---DIEPQTLRLIKEAVREKVIARLSTERMWGELKHILEEAD 671
Query: 500 AGNLLKTMLNVGVGEYMGFP 441
++L + +GV +Y+ FP
Sbjct: 672 PEHMLDRLSELGVWDYL-FP 690
>UniRef50_Q7VFG8 Cluster: Poly(A) polymerase; n=1; Helicobacter
hepaticus|Rep: Poly(A) polymerase - Helicobacter
hepaticus
Length = 468
Score = 40.7 bits (91), Expect = 0.035
Identities = 26/69 (37%), Positives = 36/69 (52%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
R+ VGD R+ ED LRI+R RF + + D H +E + L + V I+ ERI
Sbjct: 187 RIVCVGDAFARLNEDILRILRALRFSSTLGFEIDFHTKEAIFSLSSKV---CLIAKERIR 243
Query: 533 GELKKILQG 507
E K+L G
Sbjct: 244 VEFTKLLCG 252
>UniRef50_Q660G6 Cluster: Polynucleotide adenylyltransferase; n=3;
Borrelia burgdorferi group|Rep: Polynucleotide
adenylyltransferase - Borrelia garinii
Length = 410
Score = 40.7 bits (91), Expect = 0.035
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 9/230 (3%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K + +G+ + R+ ED LRI+R RF + K E+ TL + + IS ER
Sbjct: 141 KKIIRCIGNSNKRLAEDALRILRAARFSSTLNFKI---EKNTLISMKYKKENILMISKER 197
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLA 360
I E K+L+G N+ K + + ++ F N++ L+K+ LN YL
Sbjct: 198 IKNEFHKLLEGK---NIQKGIYYLKKVDF--FKNFFNLEIKTKLIKKTALLNKEKF-YLK 251
Query: 359 ALV-----KDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDK--VSDRPMKPYESLILNTS 201
A+ K + E+ + +KFS E L+ F D+K + + + L+ ++
Sbjct: 252 AITILTIEKPITELKEKLTLLKFSNKEIKLILFYRSIIDNKNIFNIKKLSDIRYLLSKST 311
Query: 200 MKQKVAIEYVREVLKYRGDEEL--LKRLDNWEIPRFPVSGKTLKECGXPV 57
+ I + + LK + + L +K + ++ + P+S K LK G +
Sbjct: 312 REHYKEIIDIYKALKGKKKKYLFIIKNIKRKKLLKNPLSLKDLKINGKDI 361
>UniRef50_Q0AB71 Cluster: Poly(A) polymerase; n=1; Alkalilimnicola
ehrlichei MLHE-1|Rep: Poly(A) polymerase -
Alkalilimnicola ehrlichei (strain MLHE-1)
Length = 479
Score = 40.7 bits (91), Expect = 0.035
Identities = 31/125 (24%), Positives = 57/125 (45%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
+ +GDP+ R +ED +R++R RF + + +T L H L + R++
Sbjct: 218 IRLMGDPETRYREDPVRMLRAVRFAAKLGFR---IHPDTAEPLPRMAHLLAEVPPARLFD 274
Query: 530 ELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAALV 351
E+ K+ G A + + G+ + FP++ E D H + LS++A +
Sbjct: 275 EVLKLFMGGLAAETFEMLRQHGLFAPL-FPMTEREIEADQ-----HGV---VLSFIAQAL 325
Query: 350 KDLDE 336
K+ DE
Sbjct: 326 KNTDE 330
>UniRef50_A6P236 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 438
Score = 40.7 bits (91), Expect = 0.035
Identities = 30/84 (35%), Positives = 39/84 (46%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K V GDPD R +ED LRI+R RF ++ D + +R N L ++ ER
Sbjct: 130 KGIVRCTGDPDRRFREDGLRILRALRFASVYGMEIDAATADAIR---RNQSLLRGVAVER 186
Query: 539 IWGELKKILQGNFAGNLLKTMLNV 468
I EL IL G A +L V
Sbjct: 187 IQVELTGILCGKNAAAVLSDFAGV 210
>UniRef50_A6NVT9 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 392
Score = 40.7 bits (91), Expect = 0.035
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VG+P R +ED LR++R RF + +N E LR +N +S ERI EL+
Sbjct: 149 VGEPGRRFREDALRMLRAVRFSAQLGFAVENATAEALR---DNAELTACLSAERIRTELE 205
Query: 521 KIL 513
KIL
Sbjct: 206 KIL 208
>UniRef50_Q6MM27 Cluster: Poly A polymerase; n=1; Bdellovibrio
bacteriovorus|Rep: Poly A polymerase - Bdellovibrio
bacteriovorus
Length = 397
Score = 39.9 bits (89), Expect = 0.062
Identities = 26/87 (29%), Positives = 48/87 (55%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VGD + R +ED+LR++R RF + + + ++ + V ++SGERI E+
Sbjct: 150 VGDAERRFEEDHLRLLRAARFSAQLNFELEPVSFAAVKKMAEKVK---SVSGERIREEMT 206
Query: 521 KILQGNFAGNLLKTMLNVGVGEYMGFP 441
K+L+ A + L+ M + G+ + + FP
Sbjct: 207 KLLKTEHADHGLQVMKDSGLMKVL-FP 232
>UniRef50_Q39TB4 Cluster: Polynucleotide adenylyltransferase region;
n=1; Geobacter metallireducens GS-15|Rep: Polynucleotide
adenylyltransferase region - Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210)
Length = 431
Score = 39.9 bits (89), Expect = 0.062
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = -1
Query: 677 KEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELKKILQGNFA 498
++D LR++R FRF + + E ETL + + + N +GERI EL ++L
Sbjct: 151 RDDPLRLVRAFRFAATLGFRI---ETETLAAITTHAPLIANSAGERIRDELFQVLCMPGT 207
Query: 497 GNLLKTMLNVGVGEYMGFPLSPN 429
G++ +TM + G+ + F LSP+
Sbjct: 208 GSVFRTMGDAGLLCVL-FGLSPS 229
>UniRef50_Q093R8 Cluster: Poly(A) polymerase; n=2;
Cystobacterineae|Rep: Poly(A) polymerase - Stigmatella
aurantiaca DW4/3-1
Length = 576
Score = 39.9 bits (89), Expect = 0.062
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
+GDP++R++ED +RI+R RF + L + E T + V L + R+ E
Sbjct: 268 IGDPEIRMREDPVRILRAVRFASKLGL---DIESRTYAAMEGAVEDLPRCAPARLLEETF 324
Query: 521 KILQGNFAGNLLKTM 477
++++G A LK +
Sbjct: 325 RLIRGGVAAPSLKLL 339
>UniRef50_Q6YRB3 Cluster: TRNA nucleotidyltransferase/polyA
polymerase; n=2; Candidatus Phytoplasma asteris|Rep:
TRNA nucleotidyltransferase/polyA polymerase - Onion
yellows phytoplasma
Length = 412
Score = 39.5 bits (88), Expect = 0.082
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
+ DP +R +ED LRI+R F F + E+ T + + H L IS +RI+ ++
Sbjct: 158 IKDPFIRFQEDPLRILRAFYFQSKLGF---CIEKTTQKAIIRKNHLLAKISSQRIYENIE 214
Query: 521 KILQGNFAGNLLKTML 474
KI+ KTM+
Sbjct: 215 KIITHKNWHQTFKTMI 230
>UniRef50_Q31FF3 Cluster: Poly(A) polymerase; n=1; Thiomicrospira
crunogena XCL-2|Rep: Poly(A) polymerase - Thiomicrospira
crunogena (strain XCL-2)
Length = 484
Score = 39.5 bits (88), Expect = 0.082
Identities = 23/102 (22%), Positives = 53/102 (51%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K ++ +GDP++R +ED +R++R RF + + E T + H L ++S R
Sbjct: 197 KGQLRLIGDPEMRYREDPVRMIRAIRFAAKLGFE---IEPNTKAPIYELAHLLKDVSHAR 253
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELD 414
++ E+ K+ A + + + + G+ ++ FP + ++ ++
Sbjct: 254 MFEEVLKLFHSGVAIEVFEKLRHFGLFTFL-FPQTHHLLSME 294
>UniRef50_Q1Q5Z9 Cluster: Similar to poly(A) polymerase; n=2;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
poly(A) polymerase - Candidatus Kuenenia stuttgartiensis
Length = 437
Score = 39.1 bits (87), Expect = 0.11
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNH-EEETLRVLXNNVHGLGNISGERIWGEL 525
+GDP R+ ED LR++R RF A + + H EET + + N + +S ERI EL
Sbjct: 143 IGDPVERLTEDKLRMIRAVRF----ACRFNFHIHEETRQAIINLAPQIHVVSAERIREEL 198
Query: 524 KKILQG 507
+KI+ G
Sbjct: 199 QKIITG 204
>UniRef50_A4A0Y5 Cluster: Poly A polymerase; n=1; Blastopirellula
marina DSM 3645|Rep: Poly A polymerase - Blastopirellula
marina DSM 3645
Length = 426
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
V +GDP+ R ED LR++R RF + E T+R + + + +S ER+
Sbjct: 150 VRAIGDPNQRFAEDKLRMLRAIRFSSTFQF---DLEMNTMRAIQRHSRNIAVVSAERVAV 206
Query: 530 ELKKIL 513
E++K+L
Sbjct: 207 EMRKML 212
>UniRef50_P42977 Cluster: CCA-adding enzyme; n=3; Bacillus|Rep:
CCA-adding enzyme - Bacillus subtilis
Length = 397
Score = 39.1 bits (87), Expect = 0.11
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VG P+ R +ED LR++R RF + ET + L ++S ER E +
Sbjct: 144 VGKPEDRFQEDALRMLRAVRFMSQLGF---TLSPETEEAIAKEKSLLSHVSVERKTIEFE 200
Query: 521 KILQGNFAGNLLKTMLNVGVGEYM-GF 444
K+LQG + L+T++ + E + GF
Sbjct: 201 KLLQGRASRQALQTLIQTRLYEELPGF 227
>UniRef50_Q62HE1 Cluster: PolyA polymerase; n=45; cellular
organisms|Rep: PolyA polymerase - Burkholderia mallei
(Pseudomonas mallei)
Length = 515
Score = 38.7 bits (86), Expect = 0.14
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
+GDP R +ED +R++R RF + + E ++ L + ++ N+ R++ E+
Sbjct: 236 IGDPATRYREDPVRMLRVVRFAAKLGFDIEEKTREPIKELADLIN---NVPAARLFDEML 292
Query: 521 KILQGNFAGNLLKTMLNVGV 462
K+L A LK + G+
Sbjct: 293 KLLLSGHALACLKQLRKQGL 312
>UniRef50_A6CGS1 Cluster: Metal dependent phosphohydrolase; n=1;
Planctomyces maris DSM 8797|Rep: Metal dependent
phosphohydrolase - Planctomyces maris DSM 8797
Length = 422
Score = 38.7 bits (86), Expect = 0.14
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
+G+P R++ED LR++R RF + + EE T + + + +S ERI EL+
Sbjct: 150 IGNPLERMQEDKLRLLRAIRFAATLHFQ---LEESTRQAVQTMADQINVVSPERIADELR 206
Query: 521 KILQGNFAGNLLKTMLNVGVGEYMGFPLSPN----------VQELDML-LKRAHHLNLSP 375
K+L + + G+ + + L+P +Q LD L L H +
Sbjct: 207 KMLIHPARSQAIALVQETGLLKQVLPELAPLWESAGNRSLWLQTLDRLKLVSTHSFETAF 266
Query: 374 LSYLAALV-----KDLDEVTVLHSRMKFSKLERDLLYFLVEHR 261
+ L L + LDE+ + R++FS +L+++LV+ R
Sbjct: 267 ATLLLDLPASGADQRLDEIYEICKRLRFSNHSLNLVHWLVQQR 309
>UniRef50_Q6MBL7 Cluster: Putative Poly(A) polymerase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative Poly(A) polymerase - Protochlamydia amoebophila
(strain UWE25)
Length = 424
Score = 38.3 bits (85), Expect = 0.19
Identities = 31/139 (22%), Positives = 61/139 (43%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
+G+P+ R K+D +R++R +F+ K + E+ + V + S RI E+
Sbjct: 158 IGEPEKRFKQDPVRLLRLLKFHARYNFKIEEQTEQAIHVCRIEI---TKSSPARILEEIL 214
Query: 521 KILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAALVKDL 342
++L+ + +K + G+ + FP + + H+L + Y L
Sbjct: 215 RMLESGASAPFIKLLAEYGILNIL-FPSLTQLLKTTYGKTIFHYLTCADQLYQHKGKNVL 273
Query: 341 DEVTVLHSRMKFSKLERDL 285
D +L + + F LER+L
Sbjct: 274 DR-AILTACLLFPVLEREL 291
>UniRef50_Q6AJ41 Cluster: Related to poly(A) polymerase; n=1;
Desulfotalea psychrophila|Rep: Related to poly(A)
polymerase - Desulfotalea psychrophila
Length = 501
Score = 38.3 bits (85), Expect = 0.19
Identities = 31/97 (31%), Positives = 46/97 (47%)
Frame = -1
Query: 671 DYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELKKILQGNFAGN 492
D LRI+R FRF +L + + + + H L ++ ERI EL L G A
Sbjct: 175 DPLRILRAFRFQSLFSL---SFDPAIAPAIIAHRHLLSGVAAERISAELDATLMGTSALE 231
Query: 491 LLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNL 381
L M ++G+ E + LS D+L AHHL++
Sbjct: 232 ALAGMEDLGILELLLPELSDG---RDILQPAAHHLDV 265
>UniRef50_Q8EQD6 Cluster: CCA-adding enzyme; n=1; Oceanobacillus
iheyensis|Rep: CCA-adding enzyme - Oceanobacillus
iheyensis
Length = 400
Score = 38.3 bits (85), Expect = 0.19
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K + VG+ + R ED LRI+R RF + +E+TL + + +++ ER
Sbjct: 139 KKLIRTVGNAEERFTEDALRILRAVRFSSQLGC---TIQEDTLEAMFVIRKQIQHLAVER 195
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPL---S 369
I EL K+ QG ++ ++++ + E + P Q + +A N++PL S
Sbjct: 196 ITIELTKLFQGQHVSKAIQYIIDLQLDEQL-----PIFQSGKSDIFKAMKENITPLHSFS 250
Query: 368 YLAALVKDLDEVTVLHSRMK 309
+ A+ LD +H +K
Sbjct: 251 EVIAVFHLLDPTIKIHDWIK 270
>UniRef50_A6DP87 Cluster: Putative poly(A) polymerase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative poly(A)
polymerase - Lentisphaera araneosa HTCC2155
Length = 385
Score = 37.9 bits (84), Expect = 0.25
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VG + R EDYLRI+R RF + + D + L + ++S ERI E K
Sbjct: 136 VGTAEERFSEDYLRIIRAARFASRLKMSIDTDLLIAAKELAPKI--TQHVSVERISDEFK 193
Query: 521 KILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAALVKDL 342
K QG+ A LK + ++ + + + + + +Y AALV+
Sbjct: 194 K-AQGH-AEEFLKVLYSMNILDVLFDSTKDHYANELWWEEVGRAAQYDGETYFAALVRPS 251
Query: 341 DEVTVLHSRMKFSKLERDLLYF---LVEH 264
+ + S + KL R ++ F LVEH
Sbjct: 252 GDKNKVESICREYKLSRSIIRFSCQLVEH 280
>UniRef50_Q9F7R3 Cluster: Predicted poly(A) polymerase; n=1;
uncultured marine gamma proteobacterium EBAC31A08|Rep:
Predicted poly(A) polymerase - Gamma-proteobacterium
EBAC31A08
Length = 410
Score = 37.5 bits (83), Expect = 0.33
Identities = 23/90 (25%), Positives = 41/90 (45%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K + +GDP R +ED +R +R RF + K DN ++ + + H L IS R
Sbjct: 150 KKVIVSIGDPQRRFEEDPVRSLRAIRFSNKLNFKIDNLVKD---AIYDKGHLLSGISNAR 206
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYM 450
++ E KI + + + + +Y+
Sbjct: 207 LFDEFCKIFLNGMGEKNFEKLCSFHLNKYL 236
>UniRef50_Q1YQK0 Cluster: Poly(A) polymerase; n=1; gamma
proteobacterium HTCC2207|Rep: Poly(A) polymerase - gamma
proteobacterium HTCC2207
Length = 453
Score = 37.5 bits (83), Expect = 0.33
Identities = 22/97 (22%), Positives = 44/97 (45%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWG 531
+ +GDP+ R +ED +R++R RF + N E T + + L +S R++
Sbjct: 183 IRIIGDPETRFREDPVRLLRVARFAAKLGF---NIEPATANPMKHRAADLQQVSPPRLFD 239
Query: 530 ELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQE 420
E K+ + K ++ + +Y+ L P + +
Sbjct: 240 ETLKLFMSGQGLDTFKILVEHRLFDYIVPQLGPMLND 276
>UniRef50_Q7U350 Cluster: CCA-adding enzyme; n=2; Candidatus
Blochmannia|Rep: CCA-adding enzyme - Blochmannia
floridanus
Length = 411
Score = 37.5 bits (83), Expect = 0.33
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -1
Query: 674 EDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELKKIL 513
ED LR++R RF + ET ++ + +H L ++S ER+W E KK L
Sbjct: 130 EDPLRVLRVARFAAKLKNIGFTIAIETFEIMTHMIHELKSLSPERVWMETKKAL 183
>UniRef50_A6VU49 Cluster: Polynucleotide adenylyltransferase region;
n=2; Marinomonas|Rep: Polynucleotide adenylyltransferase
region - Marinomonas sp. MWYL1
Length = 365
Score = 37.1 bits (82), Expect = 0.44
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Frame = -1
Query: 674 EDYLRIMRYFRFYGXIALKPDNHEEETLRVLX--NNVHGLGNISGERIWGELKKILQGNF 501
ED LR++R RF ET+ ++ ++ L +S ERIW EL+K L
Sbjct: 134 EDPLRVLRVARFAARFHHFGFTIAPETMSLMREISSSGELSALSAERIWKELEKALNTRH 193
Query: 500 AGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAALVKD--LDEVTV 327
A + + + + FP ++ ML + + L+P A L K+ L E+T
Sbjct: 194 ANVFFSVLKDANALDKL-FP-EFIWEDSQMLTDILNQVGLTPAQRWAILCKNTPLTELTQ 251
Query: 326 LHSRMK 309
LH R++
Sbjct: 252 LHQRIR 257
>UniRef50_P44439 Cluster: Probable poly(A) polymerase; n=24;
Gammaproteobacteria|Rep: Probable poly(A) polymerase -
Haemophilus influenzae
Length = 452
Score = 37.1 bits (82), Expect = 0.44
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
++ +GDP R +ED +R++R RF + + + E+ +R L L NI R++
Sbjct: 179 KLRLIGDPVTRYQEDPVRMLRSIRFMAKLDMFLEKPSEQPIRELAPL---LKNIPPARLF 235
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGFP 441
E K+LQ + + G+ E + FP
Sbjct: 236 DESLKLLQAGQGVKTYRLLRQYGLFEQL-FP 265
>UniRef50_A3IG30 Cluster: TRNA nucleotidyltransferase; n=1; Bacillus
sp. B14905|Rep: TRNA nucleotidyltransferase - Bacillus
sp. B14905
Length = 392
Score = 36.7 bits (81), Expect = 0.58
Identities = 25/84 (29%), Positives = 39/84 (46%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VGD R ED LR++R RF + E+TL + + + I+ ERI EL
Sbjct: 146 VGDAQKRFAEDALRMLRAIRFSAQLDF---TIAEDTLMAIQHRAADIAFIAKERIKAELD 202
Query: 521 KILQGNFAGNLLKTMLNVGVGEYM 450
K+ G + L+ + G+ Y+
Sbjct: 203 KLWLGTTVFSGLQKLEESGLAAYL 226
>UniRef50_A3DF92 Cluster: Metal dependent phosphohydrolase; n=1;
Clostridium thermocellum ATCC 27405|Rep: Metal dependent
phosphohydrolase - Clostridium thermocellum (strain ATCC
27405 / DSM 1237)
Length = 442
Score = 36.7 bits (81), Expect = 0.58
Identities = 27/90 (30%), Positives = 41/90 (45%)
Frame = -1
Query: 719 KXRVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGER 540
K + VG P+ R ED LR++R R + + D L + N + +S ER
Sbjct: 133 KSVIRAVGSPEDRFHEDPLRMLRAVRLSSTLGFEIDR---SVLSAIKENCKLIEKVSPER 189
Query: 539 IWGELKKILQGNFAGNLLKTMLNVGVGEYM 450
I EL KIL + N L + G+ +Y+
Sbjct: 190 IRDELSKILISDRPKNFL-VLRETGLLKYV 218
>UniRef50_A6W2I1 Cluster: Poly(A) polymerase; n=4;
Oceanospirillales|Rep: Poly(A) polymerase - Marinomonas
sp. MWYL1
Length = 484
Score = 36.3 bits (80), Expect = 0.76
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
++ +GD R +ED +R++R RF G + + E ET + H L +I R++
Sbjct: 197 QIRIIGDARQRYQEDPVRMLRAIRFAGKLGFE---LEAETAAPIKEMAHLLDHIPPARLF 253
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLN-LSPLSYLAA 357
E+ K+L + G+ Y+ FP + D LL+ N + P +++
Sbjct: 254 EEVLKLLGSGNGIETFHLLRQYGLFRYL-FP------DTDALLQSGWKRNDIDPEAFILQ 306
Query: 356 LVKDLDE 336
+K+ D+
Sbjct: 307 GLKNTDD 313
>UniRef50_A1RG69 Cluster: Poly(A) polymerase; n=15;
Gammaproteobacteria|Rep: Poly(A) polymerase - Shewanella
sp. (strain W3-18-1)
Length = 494
Score = 36.3 bits (80), Expect = 0.76
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
+GDP+ R +ED +R++R RF +++ N E+ T + + L +I R++ E+
Sbjct: 223 IGDPETRYREDPVRMLRAVRFATKLSM---NIEDVTAKPIKQLAPLLTDIPAARMYEEVL 279
Query: 521 KILQGNFAGNLLKTMLNVGVGEYMGF-PLSPNVQEL 417
K+ FAG L + EY F PL P V L
Sbjct: 280 KLF---FAGKALANF--EMMQEYKLFAPLFPQVDAL 310
>UniRef50_Q2J4B5 Cluster: Metal dependent phosphohydrolase; n=40;
Actinobacteria (class)|Rep: Metal dependent
phosphohydrolase - Frankia sp. (strain CcI3)
Length = 502
Score = 35.9 bits (79), Expect = 1.0
Identities = 25/93 (26%), Positives = 44/93 (47%)
Frame = -1
Query: 692 PDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELKKIL 513
P+ +D LRI+R RF + L P E + + + L +S ERI EL+K++
Sbjct: 176 PEASFDDDPLRILRAARFEAALGLTP---VPELVAAMRSRADRLAVVSPERIRDELRKLM 232
Query: 512 QGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELD 414
L+ ++ VG+ + + +S E+D
Sbjct: 233 SAPDPVAGLERLVEVGIADIVLPEVSAMRMEID 265
>UniRef50_O25357 Cluster: Poly(A) polymerase; n=4; Helicobacter|Rep:
Poly(A) polymerase - Helicobacter pylori (Campylobacter
pylori)
Length = 402
Score = 35.5 bits (78), Expect = 1.3
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
VG+ +R ED LRI+R RF + K + +E + + L ++S ER+ EL
Sbjct: 148 VGEARLRFFEDALRILRSLRFSATLGFKIAPNTKEAVFACKDL---LKHLSKERLQSELN 204
Query: 521 KILQGNFAGNLLK 483
K+L G A + K
Sbjct: 205 KLLMGKNAYEVAK 217
>UniRef50_Q8SS78 Cluster: TRNA ADENILYL TRANSFERASE; n=1;
Encephalitozoon cuniculi|Rep: TRNA ADENILYL TRANSFERASE
- Encephalitozoon cuniculi
Length = 464
Score = 35.5 bits (78), Expect = 1.3
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -1
Query: 695 DPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELKKI 516
DP + +D LR++R FRF+ + D +E L V +S ERI E+ KI
Sbjct: 169 DPRTTLLDDPLRLVRIFRFHSKLGFTIDKKIDEALEDKRVKVALAKKVSNERIHIEIFKI 228
Query: 515 LQ 510
L+
Sbjct: 229 LR 230
>UniRef50_A2F779 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 599
Score = 35.1 bits (77), Expect = 1.8
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Frame = -1
Query: 608 HEEETLRVLXNNVHGLGNISGERIWGELKKILQGN----FAGNLLKTMLNVGVGEYMGFP 441
H E+ L+V+ + + +G S E IW + ++I N F L +++ V E
Sbjct: 83 HSEDKLKVIKDAITQIGTFSPE-IWDKYREISPDNSDEIFKQELSCLIIDRDVIEMENMD 141
Query: 440 LSPNVQE-----LDMLLKRAHHLNLSPLSYLAALVKDLDEVTVLHSRMKFSKLERDL--L 282
L + E +D+L + HH + + +S A V+D +T + + + +
Sbjct: 142 LDVELNEDSQKIIDLL--QIHHFDFTKISTAIAFVRDFPSITNFEWCLNYHPYNQTIWQS 199
Query: 281 YFLVEHRDDKVSDRPMK 231
Y + D +SDR ++
Sbjct: 200 YLTIYPNDKNISDRSIR 216
>UniRef50_Q8F4S0 Cluster: Poly(A) polymerase; n=4; Leptospira|Rep:
Poly(A) polymerase - Leptospira interrogans
Length = 432
Score = 34.7 bits (76), Expect = 2.3
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
+G+P R ED LR +R RF + + + + + +L NV +S ER+ EL
Sbjct: 158 IGNPIERFTEDGLRPIRAIRFVSSLGFHLEPNTAKAI-ILCKNV--TAKVSRERVHDELN 214
Query: 521 KILQGNFAGNLLKTMLNVGVGE 456
KIL+ LK G+ E
Sbjct: 215 KILKSKNPTPSLKLFKEFGILE 236
>UniRef50_A0CB80 Cluster: Chromosome undetermined scaffold_163, whole
genome shotgun sequence; n=3; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_163, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 980
Score = 34.7 bits (76), Expect = 2.3
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 246 RNFVISMFYQKVKQISFQFREFHSAMQDC 332
RNF++S+F K+K+I+ Q + H +Q+C
Sbjct: 940 RNFIVSLFQIKLKRIAIQSQNLHKKLQNC 968
>UniRef50_Q8D2W4 Cluster: CCA-adding enzyme; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
CCA-adding enzyme - Wigglesworthia glossinidia
brevipalpis
Length = 403
Score = 34.7 bits (76), Expect = 2.3
Identities = 30/106 (28%), Positives = 48/106 (45%)
Frame = -1
Query: 677 KEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELKKILQGNFA 498
KED LR++R RF + + +TL+++ + L I ERIW E KK L
Sbjct: 129 KEDPLRVLRTARFAAYLFHLNFFIDSKTLKIMSEMIDELFFIPVERIWLETKKALLCRNP 188
Query: 497 GNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLA 360
K +L G + + FP N+ + + ++NL L+ A
Sbjct: 189 HVYFKVLLKCGALKKI-FPEIENLFHIKSFYNK--NINLGSLTLRA 231
>UniRef50_Q9JZY9 Cluster: PolyA polymerase; n=4; Neisseria|Rep:
PolyA polymerase - Neisseria meningitidis serogroup B
Length = 453
Score = 34.3 bits (75), Expect = 3.1
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = -1
Query: 713 RVAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIW 534
R+ +GD R +ED +RI+R R G + + EET + ++ L + R++
Sbjct: 176 RLVMIGDAAERYQEDPVRILRAIRLSGKLGFE---LSEETAAPIAESICRLKHEPVARLF 232
Query: 533 GELKKILQGNFAGNLLKTM 477
E+ K+L A LK +
Sbjct: 233 DEIMKLLFSGHARECLKRL 251
>UniRef50_Q1DJQ5 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 625
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = -1
Query: 695 DPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELKKI 516
+P K+D LR++R RF + K D + EE+++ IS ERI E++K+
Sbjct: 289 EPYQTFKDDPLRVLRLIRFSSRLGYKIDPNTEESMQHDDIKDALKLKISQERIGAEVEKM 348
Query: 515 LQG 507
L+G
Sbjct: 349 LKG 351
>UniRef50_Q49UH8 Cluster: Putative uncharacterized protein; n=1;
Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305|Rep: Putative uncharacterized protein -
Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 /DSM 20229)
Length = 654
Score = 33.5 bits (73), Expect = 5.4
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = -1
Query: 350 KDLDEVTVLHSRMKFSKLERDLLYFLVEHRDD--KVSDRPMKPYESLILNTSMKQKVAIE 177
KD+D+VT HS++K D L + VE++++ K+ D + +S+ K K IE
Sbjct: 259 KDIDKVTTNHSKVK------DNLDYYVENKENNLKILDSKLSERDSISAKNKEKLKKEIE 312
Query: 176 YVREVLKYRGDEEL--LKRLDNWE 111
++ LK + D L L+ ++N E
Sbjct: 313 KTQQSLKKQNDVVLNHLQSVNNKE 336
>UniRef50_A2BUB7 Cluster: Poly A polymerase family; n=5;
Prochlorococcus marinus|Rep: Poly A polymerase family -
Prochlorococcus marinus (strain MIT 9515)
Length = 415
Score = 33.5 bits (73), Expect = 5.4
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = -1
Query: 674 EDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELKKILQGNFAG 495
ED LRI+R FRF + D + ++ N L I+ ERI E+++I+ G+ A
Sbjct: 167 EDPLRILRCFRFVSELNFNVDVNLINVIKTCKNK---LSLIASERINYEIQRIIIGSEAA 223
Query: 494 NLLKTMLNVGVGEYM 450
+K + + +Y+
Sbjct: 224 YAIKLINKFKIFDYL 238
>UniRef50_UPI0000F1E3A0 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 314
Score = 33.1 bits (72), Expect = 7.1
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = -1
Query: 329 VLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMKQKVAIEYVREVLKYR 150
V HS + K+ +L + E +D D P P + + Q+ AI + E++K +
Sbjct: 105 VEHSNSYYEKMSEELEKIVHEVKDSPTDDNPTSPPTAQNACAEVSQEEAIRRIIELIKQQ 164
Query: 149 GDE 141
GD+
Sbjct: 165 GDK 167
>UniRef50_Q3A9F0 Cluster: PolyA polymerase/tRNA
nucleotidyltransferase family protein; n=1;
Carboxydothermus hydrogenoformans Z-2901|Rep: PolyA
polymerase/tRNA nucleotidyltransferase family protein -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 441
Score = 33.1 bits (72), Expect = 7.1
Identities = 26/97 (26%), Positives = 42/97 (43%)
Frame = -1
Query: 680 VKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELKKILQGNF 501
+ ED +RI+R R G + E+ET+ V + + + GER+ ELKKI
Sbjct: 140 ILEDPVRILRGIRLAGELGFAV---EQETMVVFKQYIQYIKKMPGERVAEELKKIFTLKP 196
Query: 500 AGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHH 390
A ++ + + G E L + L + HH
Sbjct: 197 AVPMVDMLFHTGFFEVFNLGLKEGYE----LYQNYHH 229
>UniRef50_A0DIL1 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_52,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 348
Score = 33.1 bits (72), Expect = 7.1
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Frame = -1
Query: 491 LLKTMLNVG--VGEYMGFPLSPNVQELDMLLKRAHHLNLSPLSYLAALVKDLDEVTVLHS 318
LL ++ VG V EY P+ +QE + LK+ + + + +KD E+ V+
Sbjct: 43 LLSSLQQVGMNVQEYQDKPVQQIMQECEQKLKKTYTVKVVG-------IKD-GELAVISK 94
Query: 317 RMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMKQKVAIEYVREVLKYRGDEE 138
R K ++ + + +++D + +PY+ +++ K ++ V++V K DEE
Sbjct: 95 RFALPK-KKSMKQ--ISNKEDPIFQLSQQPYQ---IHSQFPNK-QLKAVKKV-KDPQDEE 146
Query: 137 LLKRLDNWEIPRF-PVSGKTLKE 72
KRL NW+ +F + GK E
Sbjct: 147 FKKRLLNWQAEQFEKMKGKPQAE 169
>UniRef50_A3LYX2 Cluster: Phosphatidylinositol-4-kinase involved in
protein kinase C pathway; n=6; Fungi/Metazoa group|Rep:
Phosphatidylinositol-4-kinase involved in protein kinase
C pathway - Pichia stipitis (Yeast)
Length = 1910
Score = 33.1 bits (72), Expect = 7.1
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = -1
Query: 407 LKRAHHLNLSPLSYLAALVKDLDEVTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKP 228
L ++ HL ++ +K L E LH + + E F V + K+ R
Sbjct: 1213 LNQSDHLLKLYTRFVEVGLKSL-ETASLHPFARIGRFELIRFSFDVLNYHHKLGSRSTAN 1271
Query: 227 YESLILNTSM---KQKVAIEYVREVLKYRGDEELLKRL 123
LILN S+ KQ+ A + +LK+R D LLK +
Sbjct: 1272 LTKLILNGSLSWFKQRSAYPFGSNILKFRADYTLLKEV 1309
>UniRef50_Q10004 Cluster: Uncharacterized protein T05H10.8; n=2;
Caenorhabditis|Rep: Uncharacterized protein T05H10.8 -
Caenorhabditis elegans
Length = 377
Score = 33.1 bits (72), Expect = 7.1
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 167 EVLKYRGDEELLKRLDNWE-IPRFPVSGKTLKE 72
+VLK + EELL+RL WE P SGK L+E
Sbjct: 86 DVLKVKSLEELLQRLTEWEDDPAMKASGKALRE 118
>UniRef50_UPI0001597EB8 Cluster: GerBA; n=1; Bacillus
amyloliquefaciens FZB42|Rep: GerBA - Bacillus
amyloliquefaciens FZB42
Length = 483
Score = 32.7 bits (71), Expect = 9.4
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -1
Query: 248 SDRPMKPYESLILNTSMKQKVAIEYVREVLKYRGDEELLKRLDNWEIPRFPVSG 87
S P + + L K+++A+ Y+R++ +E++KRLD+ I P SG
Sbjct: 156 SGDPNLQIKEITLGERTKKRIAVAYIRDIAPDDVVKEVMKRLDSITIDDIPESG 209
>UniRef50_Q9Z6U2 Cluster: Poly A Polymerase; n=9; Chlamydiaceae|Rep:
Poly A Polymerase - Chlamydia pneumoniae (Chlamydophila
pneumoniae)
Length = 430
Score = 32.7 bits (71), Expect = 9.4
Identities = 26/100 (26%), Positives = 45/100 (45%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
+GDP R K+D +R++R + ++ P E +T L L S R++ EL
Sbjct: 181 IGDPFTRFKQDPVRMLRLLKI---LSRSPFTVETQTQEALIACRQELIKSSQARVFEELI 237
Query: 521 KILQGNFAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLK 402
K+L A N + ++ + E + FP L+ L+
Sbjct: 238 KMLNSGAAKNFFQLLIENHLLEIL-FPYMDKAFRLNRALE 276
>UniRef50_Q832I1 Cluster: Transcriptional regulator; n=1;
Enterococcus faecalis|Rep: Transcriptional regulator -
Enterococcus faecalis (Streptococcus faecalis)
Length = 244
Score = 32.7 bits (71), Expect = 9.4
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = -1
Query: 308 FSKLERDLLYFLVEHRDDKVSDRPM--KPYESLILNTSMKQ-KVAIEYVREVLKYRGDEE 138
F+K ER LLY+L + + VS R + + I N+S+ Q + +VRE L + G EE
Sbjct: 149 FTKNERKLLYYLYKSKGKCVSRRELCQLMWGEEISNSSLSQLSTLVAHVREKLTHVGFEE 208
Query: 137 L 135
L
Sbjct: 209 L 209
>UniRef50_Q1IUE8 Cluster: Metal dependent phosphohydrolase; n=2;
Acidobacteria|Rep: Metal dependent phosphohydrolase -
Acidobacteria bacterium (strain Ellin345)
Length = 454
Score = 32.7 bits (71), Expect = 9.4
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
+GDP R +ED LR++R RF + ET+ V+ + +S ER+ EL
Sbjct: 161 IGDPRQRFEEDKLRMLRAVRFAARFEYE---IAPETMAVIQQLSPQISVVSHERVRDELT 217
Query: 521 KIL 513
K+L
Sbjct: 218 KML 220
>UniRef50_A6FZN1 Cluster: Poly(A) polymerase; n=1; Plesiocystis
pacifica SIR-1|Rep: Poly(A) polymerase - Plesiocystis
pacifica SIR-1
Length = 486
Score = 32.7 bits (71), Expect = 9.4
Identities = 19/84 (22%), Positives = 42/84 (50%)
Frame = -1
Query: 701 VGDPDVRVKEDYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELK 522
+G+P+VR +ED +R++R +F + E ++ + L + S R+ EL
Sbjct: 194 IGEPEVRFREDPVRMIRAIKFAARLDF---TVEMDSWQALLRCAPDIARCSRARLVEELY 250
Query: 521 KILQGNFAGNLLKTMLNVGVGEYM 450
K+L+G + + M+ + +++
Sbjct: 251 KLLRGGSSRRAFELMIQAELFQHI 274
>UniRef50_A5EW47 Cluster: Potential RTX family protein; n=1;
Dichelobacter nodosus VCS1703A|Rep: Potential RTX family
protein - Dichelobacter nodosus (strain VCS1703A)
Length = 2762
Score = 32.7 bits (71), Expect = 9.4
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 620 KPDNHEEETLRVLXNNVHGLGNISGERIWGELKKILQGNFAGNLL 486
K DNH + V+ N H L ++ G++ W ++ + +GN G+++
Sbjct: 2126 KGDNHYDSNDLVMIPNTHQLISVGGQQYWLDITFVQKGNSRGDVV 2170
>UniRef50_A1ZI16 Cluster: Putative YapH protein; n=2; Microscilla
marina ATCC 23134|Rep: Putative YapH protein -
Microscilla marina ATCC 23134
Length = 342
Score = 32.7 bits (71), Expect = 9.4
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Frame = -1
Query: 614 DNHEEETLRVLXNNVHGLGN---ISGERIWG--ELKKILQG---NFAGNLLKTMLNVGVG 459
+N E ET+R+ NN G+G ++ + G +L L G NF+G++ L + VG
Sbjct: 194 NNAETETMRIHTNNNVGIGTNNPLAKLHVNGTAKLAGALTGTSANFSGSVQANSLTLNVG 253
Query: 458 EYMGFPLSPN-----VQELDMLLKRAHHLNLSPLSYLAALVKDLDEVTVLHSRMKFSKLE 294
+ + + N +++++ + HHL P + A + K+ V ++ + K+E
Sbjct: 254 SFPDYVFAKNYDLMPLEQVEAYINAHHHLPKVPKA--AKVEKEGMNVAQINV-LLVEKVE 310
Query: 293 RDLLYFLVEHRDDKVSDRPMKPYESLILN 207
L+ + +++ K + M+ E + N
Sbjct: 311 ELTLHLIEQNKQMKQMQQKMQALEKKVQN 339
>UniRef50_A0Q3L3 Cluster: PolyA polymerase family protein; n=1;
Clostridium novyi NT|Rep: PolyA polymerase family
protein - Clostridium novyi (strain NT)
Length = 457
Score = 32.7 bits (71), Expect = 9.4
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = -1
Query: 680 VKEDYLRIMRYFRFYGXIALKPDNH-EEETLRVLXNNVHGLGNISGERIWGELKKILQGN 504
+ +D +RI+R +RF A+K H +E + + +N H + ERI+ E +I++ +
Sbjct: 137 ISDDSVRILRAYRF----AIKYGMHFSKECEKQIIDNKHNIMKFPKERIFNEFMQIIKCD 192
Query: 503 FAGNLLKTMLNVGVGEYMGFPLSPNVQELDMLLKRAHHL 387
G + + +GV + L P + EL + + +H+
Sbjct: 193 KFGRAFEELDTLGVLK----NLLPYIDELKTVGRCKYHI 227
>UniRef50_Q5CUM5 Cluster: Replication protein A1 large subunit; n=3;
Cryptosporidium|Rep: Replication protein A1 large
subunit - Cryptosporidium parvum Iowa II
Length = 484
Score = 32.7 bits (71), Expect = 9.4
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = -1
Query: 671 DYLRIMRYFRFYGXIALKPDNHEEETLRVLXNNVHGLGNISGERIWGELKKILQGNFAGN 492
D + I+R+F + + +N +E R + V G + +WGEL ++ F GN
Sbjct: 147 DLIGIVRHFSPSTKVISRKNN--DEVSRRTISVVDKTGFLINITLWGELAEVSDEKFLGN 204
Query: 491 LLKTMLNVGVGEYMG 447
+ + ++ + EY G
Sbjct: 205 PVVALKSIQIREYQG 219
>UniRef50_Q233K7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 503
Score = 32.7 bits (71), Expect = 9.4
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = -1
Query: 335 VTVLHSRMKFSKLERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMKQKVAIEYVRE 165
+++L+ + ++ R L ++E + DK RP+K Y+ I+N + + K +E+ +
Sbjct: 266 ISLLNDMLFLNEAIRPTLKSIIEMKSDKYFPRPLKYYQGTIMNNAFEFKGWVEWYND 322
>UniRef50_Q8ZRQ8 Cluster: Poly(A) polymerase; n=89;
Proteobacteria|Rep: Poly(A) polymerase - Salmonella
typhimurium
Length = 465
Score = 32.7 bits (71), Expect = 9.4
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = -1
Query: 710 VAFVGDPDVRVKEDYLRIMRYFRFYGXIALKPDNH-EEETLRVLXNNVHGLGNISGERIW 534
+ +G+P+ R +ED +R++R RF A K + H ET + L +I R++
Sbjct: 192 IRLIGNPETRYREDPVRMLRAVRF----AAKLNMHISPETAEPIPRLATLLNDIPPARLF 247
Query: 533 GELKKILQGNFAGNLLKTMLNVGVGEYMGF-PLSPNV 426
E K+LQ AGN +T + EY F PL P +
Sbjct: 248 EESLKLLQ---AGNGYETYQQ--LREYHLFQPLFPTI 279
>UniRef50_Q49XM7 Cluster: Response regulator arlR; n=97;
Bacteria|Rep: Response regulator arlR - Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305
/DSM 20229)
Length = 220
Score = 32.7 bits (71), Expect = 9.4
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Frame = -1
Query: 476 LNVGVGEYM--GFPLSPNVQELDMLLKRAHHLNLSPLSYLAALVKDLDEVTVLHSRMKFS 303
L+ G +Y+ F + + + +L+R NL + + + KD +VTV + +
Sbjct: 91 LDYGADDYIVKPFDIEELLARIRAMLRRQPQKNLIDIKGII-IDKDAFKVTVDGQPLDLT 149
Query: 302 KLERDLLYFLVEHRDDKVSDRPMKPYESLILNTSMKQKVA---IEYVREVLKYRGDEELL 132
K E DLL+ LVE+R + V R + +T ++ V I Y+R LK G ++ +
Sbjct: 150 KTEYDLLFLLVENR-NHVLQREQIITDVWGYDTEVETNVVDVYIRYLRNKLKPFGKDKCI 208
Query: 131 K 129
+
Sbjct: 209 E 209
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,375,540
Number of Sequences: 1657284
Number of extensions: 12059433
Number of successful extensions: 32165
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 31189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32115
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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