Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_E03
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    28   0.25 
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    24   4.1  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   5.4  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 258 ISMFYQKVKQISFQFREFHSAMQDCDF 338
           +S +YQ V+ +  + +EFH A+ + DF
Sbjct: 80  LSCYYQNVRGLRTKTKEFHLAVSEADF 106


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 710 VAFVGDPDVRVKEDY 666
           +A+V DPD R  EDY
Sbjct: 371 IAYVHDPDYRYLEDY 385


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = +2

Query: 215 LMIHRVSWVYQKLCHLY--VLPESKANLFPI 301
           +++ + S  Y  + H Y  V+PE KANL+ I
Sbjct: 429 VILPQASEGYGPISHYYLIVVPEDKANLYKI 459


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,472
Number of Sequences: 2352
Number of extensions: 12085
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)