Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_E02
         (614 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000EFD0EF Cluster: hypothetical protein An18g01380;...    36   1.0  
UniRef50_Q85JV0 Cluster: NADH dehydrogenase 5; n=1; Diachasmimor...    36   1.0  
UniRef50_A6LYQ2 Cluster: Methyl-accepting chemotaxis sensory tra...    34   3.1  
UniRef50_A7BY53 Cluster: Putative uncharacterized protein; n=1; ...    33   4.1  
UniRef50_Q62097 Cluster: Mus musculus ORFs (putative primordial ...    32   9.4  
UniRef50_Q8VLP7 Cluster: Group B streptococcus secreted protein ...    32   9.4  
UniRef50_A1ZH50 Cluster: Serine/threonine protein kinases; n=1; ...    32   9.4  
UniRef50_Q674P3 Cluster: NADH dehydrogenase subunit 6; n=1; Tetr...    32   9.4  
UniRef50_Q23AV8 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  

>UniRef50_UPI0000EFD0EF Cluster: hypothetical protein An18g01380;
           n=1; Aspergillus niger|Rep: hypothetical protein
           An18g01380 - Aspergillus niger
          Length = 1430

 Score = 35.5 bits (78), Expect = 1.0
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
 Frame = +2

Query: 32  TCQLIYRAFQITLPKSSQTNAXCWKQIIISGYSINLLIPYIDSYW*IQIVK*----ILST 199
           TC+ IY   + T  + S      W  +     S +  I  + +Y    IV      +++T
Sbjct: 384 TCRPIYEGIEETKDRRSSPGTLIWSILSTVPASASSQIALVAAYGGFAIVSRTRDEVMTT 443

Query: 200 RNLFMCLGLYYTSILVFFLLIKK-PLLISVYLC 295
             +F  L L   S    F+LI++ PLL+S Y C
Sbjct: 444 DTMFTSLALLQISTDPLFMLIQETPLLVSAYKC 476


>UniRef50_Q85JV0 Cluster: NADH dehydrogenase 5; n=1; Diachasmimorpha
           sp. M131|Rep: NADH dehydrogenase 5 - Diachasmimorpha sp.
           M131
          Length = 204

 Score = 35.5 bits (78), Expect = 1.0
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = +2

Query: 206 LFMCLGLYYTSILVFFLLIKKPLLISVYLCYKLYDIINYNIIELSQINILVADPGNVFFF 385
           L M L + YTS L+F++ +K P + +++  Y  ++I+NY+II L  +++      N   F
Sbjct: 21  LSMGLTISYTSRLIFYISMKSPKM-NLFNFYMSWNIMNYSIIILFFMSLFYGSFLNWLMF 79

Query: 386 S-KGKIF 403
           S   KIF
Sbjct: 80  SCMNKIF 86


>UniRef50_A6LYQ2 Cluster: Methyl-accepting chemotaxis sensory
           transducer; n=1; Clostridium beijerinckii NCIMB
           8052|Rep: Methyl-accepting chemotaxis sensory transducer
           - Clostridium beijerinckii NCIMB 8052
          Length = 570

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 23/78 (29%), Positives = 38/78 (48%)
 Frame = +1

Query: 61  NHFAEIIPNKRXVLETNNNIWI*YKSFDSIHRFILVNSNSQVDIKYKKPFYVFRPILYLD 240
           N+F+E   N   V ET  NI   Y S D     ++ N+ +Q D  Y +    F+  LY+ 
Sbjct: 140 NNFSEADENYSKVTETRKNI---YLSMDE----LIKNNVNQADASYSENNSTFKRSLYIT 192

Query: 241 TSVLLVNKKAAAYKRVSV 294
            S++L++   A    +S+
Sbjct: 193 ISIILISLLLAVILGLSI 210


>UniRef50_A7BY53 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. PS
          Length = 366

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +2

Query: 188 ILSTRNLFMCLGLYYTSILVFFLLIKKPLLISVYLCYKLYDIINYNIIELSQINILVADP 367
           I S + L    GL+ + + V FL+I  P+  + + C K + +I   I   +Q+N      
Sbjct: 3   INSHKLLIKIFGLFSSFVYVLFLIISPPIAAASFNCSKAHTVIKKTICSNTQLNKADEQL 62

Query: 368 GNVF 379
           G ++
Sbjct: 63  GKIY 66


>UniRef50_Q62097 Cluster: Mus musculus ORFs (putative primordial
           protein), complete cds; n=6; Eukaryota|Rep: Mus musculus
           ORFs (putative primordial protein), complete cds - Mus
           musculus (Mouse)
          Length = 250

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
 Frame = +2

Query: 44  IYRAFQITLPKSSQTNAXCWKQIIISGYSINLLIP-YIDSYW*I--QIVK*ILSTRNLFM 214
           IY +  +++  S   +  C   I +S Y +++ +  Y+  Y  I   I+   LS  ++ +
Sbjct: 64  IYLSIYLSIYLSIYLSYVCLSSIYLSIYHLSIYLSIYLSIYLSIYLSIMSDCLSIMSVCL 123

Query: 215 CLGLYYTSILVFFLLIKKPLLISVYLCYKLYDIINY 322
            + L Y  + ++  +I   + +S+YLC  L   ++Y
Sbjct: 124 SICLSYVCLSIYLSIICLSVYLSIYLCIYLSIYLSY 159


>UniRef50_Q8VLP7 Cluster: Group B streptococcus secreted protein
           precursor; n=10; Streptococcus agalactiae|Rep: Group B
           streptococcus secreted protein precursor - Streptococcus
           agalactiae
          Length = 544

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 97  VLETNNNIWI*YKSFDSIHRFILVNSNSQVD 189
           +L    N W+ YKSF+ + RF+L+   S V+
Sbjct: 239 ILTIEGNQWLSYKSFNGVRRFVLLGKASSVE 269


>UniRef50_A1ZH50 Cluster: Serine/threonine protein kinases; n=1;
           Microscilla marina ATCC 23134|Rep: Serine/threonine
           protein kinases - Microscilla marina ATCC 23134
          Length = 440

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +1

Query: 55  ISNHFAEIIPNKRXVLETNNNIWI*YKSFDSIHRFILVNSNSQVDIKYKKPFYVFRP 225
           +     EI+  K  + + NNNI    +    I   IL N  S++  +Y KPF  FRP
Sbjct: 162 VEERTTEIVHQKAELEKKNNNITASIRYAQRIQNAILPNI-SEIQREYLKPFIFFRP 217


>UniRef50_Q674P3 Cluster: NADH dehydrogenase subunit 6; n=1;
           Tetraleurodes acaciae|Rep: NADH dehydrogenase subunit 6
           - Tetraleurodes acaciae (acacia whitefly)
          Length = 142

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 20/73 (27%), Positives = 37/73 (50%)
 Frame = +2

Query: 188 ILSTRNLFMCLGLYYTSILVFFLLIKKPLLISVYLCYKLYDIINYNIIELSQINILVADP 367
           +LS   L + + LY+ S +VF L +   +++ +Y C  ++   +   I LS ++ L+   
Sbjct: 15  LLSVLFLSLAIRLYFFSYIVFLLFMSGAVMLLMYFCSVIF---SEKSILLSDLSFLLVLF 71

Query: 368 GNVFFFSKGKIFN 406
             VF FS    F+
Sbjct: 72  TLVFLFSSTSFFD 84


>UniRef50_Q23AV8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 454

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +1

Query: 67  FAEIIPNKRXVLETNNNIWI*YKSFDSIHRFILVNSNSQVDIKY 198
           FA  IPN   V  T NN+WI Y+S   I  F  ++ +S + ++Y
Sbjct: 170 FATFIPNINIVQATQNNMWIAYQSDYIIISFNHLSGSSILAVQY 213


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,486,540
Number of Sequences: 1657284
Number of extensions: 10486305
Number of successful extensions: 23690
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23679
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)