Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_E02
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   1.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   1.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   3.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   3.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.7  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 22  PFKHMSINLSCISNHFAEIIPNKRXVLETNNNIWI 126
           PF   S+  S  SN +   +P++  V + N   WI
Sbjct: 364 PFSRWSLCNSARSNKYPTRVPHRPYVAQYNARRWI 398


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 158 NLCMESKDLYYIQILLFVSSTMRL 87
           NLC  +  +Y  Q  LFV ST  +
Sbjct: 223 NLCQVANSIYGFQNFLFVLSTFSI 246


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 281  SVYLCYKLYDIINYNII 331
            S+YL   LY IIN N++
Sbjct: 1041 SMYLLLILYSIINLNVV 1057


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 281  SVYLCYKLYDIINYNII 331
            S+YL   LY IIN N++
Sbjct: 1041 SMYLLLILYSIINLNVV 1057


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 281  SVYLCYKLYDIINYNII 331
            S+YL   LY IIN N++
Sbjct: 1041 SMYLLLILYSIINLNVV 1057


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 281  SVYLCYKLYDIINYNII 331
            S+YL   LY IIN N++
Sbjct: 1041 SMYLLLILYSIINLNVV 1057


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -1

Query: 203 FLYLIST*LFEFTNMNLCMESKDLYYIQILLFVSSTMRLF 84
           F + IST  + FT  N+       +YI   L V +    F
Sbjct: 239 FYFFISTFFYFFTTGNIIATYDKQFYIHNALIVRALFLFF 278



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 210 KRFLVLNIYLTI 175
           +RF +LN YLTI
Sbjct: 181 RRFTILNNYLTI 192


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -1

Query: 203 FLYLIST*LFEFTNMNLCMESKDLYYIQILLFVSSTMRLF 84
           F + IST  + FT  N+       +YI   L V +    F
Sbjct: 235 FYFFISTFFYFFTTGNIIATYDKQFYIHNALIVRALFLFF 274



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 210 KRFLVLNIYLTI 175
           +RF +LN YLTI
Sbjct: 177 RRFTILNNYLTI 188


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 188 ILSTRNLFMCLGLYYTSILVFFLL 259
           I+ T +L   L +YY  + +FFLL
Sbjct: 121 IIFTVHLLFLLCIYYFVVPLFFLL 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,566
Number of Sequences: 336
Number of extensions: 3176
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)