Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_D24
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    29   0.035
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           24   1.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   1.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   1.7  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   3.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.3  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 29.1 bits (62), Expect = 0.035
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = -3

Query: 307 NICKSGLRELFLKITSSSMGFAYLDYTVFYT-----GRFVIRFEMLSDSSNSLKNLI 152
           N+    L+ L  K+  S +GF  +DYT+ Y+       +++ F     SSNS  N +
Sbjct: 339 NVQSYSLQLLHQKVQFSVLGFFVVDYTLLYSIVGAVTTYLVIFIQFDQSSNSRNNYV 395


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = +3

Query: 126 TFYENYRTSIRFFNEFDESDNISNRITN 209
           +FY+NY+T+    ++ D++ N  +  T+
Sbjct: 14  SFYQNYKTNPFLASDCDKNQNTEHNYTH 41


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 126 TFYENYRTSIRFFNEFDESDNISNRITN 209
           +FY+NY+T+    ++ D++ N     T+
Sbjct: 14  SFYQNYKTNPFLASDCDKNQNTEQNYTH 41


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 126 TFYENYRTSIRFFNEFDESDNISNRITN 209
           +FY+NY+T+    ++ D++ N     T+
Sbjct: 14  SFYQNYKTNPFLASDCDKNQNTEQNYTH 41


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 130 NVINNQIILPCYVACML 80
           NV+ N+ +L  YV C+L
Sbjct: 37  NVVKNERLLKSYVDCLL 53


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 150 SIRFFNEFDESDNISNRITNLP 215
           +I+  N  +E D  +NR+ N+P
Sbjct: 37  AIKILNRLEELDLSNNRLRNVP 58


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
          beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 41 LHNEREPFPKPKRQH 85
          L+  R+P+P+ K+ H
Sbjct: 38 LYTYRQPYPRQKKSH 52


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 282 NCS*K*RVAVWV 247
           NC+ K RVAVW+
Sbjct: 228 NCTAKGRVAVWM 239


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 282 NCS*K*RVAVWV 247
           NC+ K RVAVW+
Sbjct: 228 NCTAKGRVAVWM 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,212
Number of Sequences: 336
Number of extensions: 2858
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)