Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_D23
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    27   0.13 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.52 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.8  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   2.8  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.8  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   6.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   6.4  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 473 IFSSFIKNVYMFFFFLIPFSFHRRLRTTLVSIYLCLRIVVLSL 601
           I +SF+ N Y F  F +  SF+    TTL ++Y  + + +L L
Sbjct: 289 ILTSFLNNFY-FIIFQVFESFYLHKATTLETVYYFISLGLLIL 330


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 512 FFLIPFSFHRRLRTTLVSIYLCLRIVVLSLST 607
           F L+P   H RL   +  +YL    VVLSL +
Sbjct: 17  FALLPVKKHHRLEKLVPCVYLTSFSVVLSLGS 48


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 467 KNIFSSFIKNVYMFFFFLIPFSFHRR 544
           KN+  S I NV M+F   + F+ +++
Sbjct: 745 KNLIFSLIANVAMYFVISVQFNQNQK 770


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 446 FKFITDVKNIFSSFIKNVYMFFFFLI 523
           F+F+  V NIF +F+  ++    F +
Sbjct: 66  FRFVYAVYNIFGAFVMGLFCILKFAL 91


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 412 CXKYWSCCNQT 380
           C +YW+C N T
Sbjct: 112 CTRYWTCWNGT 122


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -2

Query: 412 CXKYWSCCNQTIQ 374
           C KYW C N   +
Sbjct: 38  CDKYWKCDNNVAE 50


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -2

Query: 412 CXKYWSCCNQTIQ 374
           C KYW C N   +
Sbjct: 38  CDKYWKCDNNVAE 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,021
Number of Sequences: 336
Number of extensions: 3584
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)