Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_D16
(367 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 103 1e-21
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 91 6e-18
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 80 1e-14
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 73 1e-12
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 69 2e-11
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 69 2e-11
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 59 2e-08
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 56 2e-07
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 52 4e-06
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 46 2e-04
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 42 0.005
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 40 0.019
UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4; T... 40 0.019
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 38 0.057
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 37 0.099
UniRef50_Q8Y3Q8 Cluster: Lmo2775 protein; n=5; Listeria|Rep: Lmo... 31 6.5
UniRef50_UPI0000F2ADF6 Cluster: PREDICTED: hypothetical protein;... 31 8.6
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 103 bits (247), Expect = 1e-21
Identities = 56/93 (60%), Positives = 62/93 (66%)
Frame = -3
Query: 317 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 138
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 137 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRQ 39
+Q K NLR YK KKYKPLDLR KKTRAMR+
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRR 93
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 91.1 bits (216), Expect = 6e-18
Identities = 49/93 (52%), Positives = 58/93 (62%)
Frame = -3
Query: 317 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 138
M K+KC LR + L LRV+KVTGG ASKLSKIRVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 137 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRQ 39
+Q K LR Y + KYKP+DLR KKTRA+R+
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRR 93
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 79.8 bits (188), Expect = 1e-14
Identities = 44/90 (48%), Positives = 54/90 (60%)
Frame = -3
Query: 308 VKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 129
VK EL++K L NLRV KV GG +SK+ +I +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 128 KMKVNLRNHYKNKKYKPLDLRAKKTRAMRQ 39
K + NLR YK K PLDLRAKKTRA+R+
Sbjct: 137 KQRANLREFYKGKSQIPLDLRAKKTRAIRR 166
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 73.3 bits (172), Expect = 1e-12
Identities = 40/96 (41%), Positives = 52/96 (54%)
Frame = -3
Query: 326 TVKMGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARV 147
T+ KVK +L K L+ LRV K+ G +SK +I VRK+IARV
Sbjct: 61 TMSTSKVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARV 120
Query: 146 YIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRQ 39
V + + LR YKNKKY PLDLR + TRA+R+
Sbjct: 121 LTVINANQRAQLRLFYKNKKYTPLDLRPRLTRALRR 156
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 69.3 bits (162), Expect = 2e-11
Identities = 42/92 (45%), Positives = 51/92 (55%)
Frame = -3
Query: 317 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 138
M VK ELRT L+ LR++K G A K SKI VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 137 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMR 42
Y+QK K+ LR YKNKK+KP +LR K T+ R
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKR 91
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 69.3 bits (162), Expect = 2e-11
Identities = 40/92 (43%), Positives = 50/92 (54%)
Frame = -3
Query: 311 KVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 132
K++ ELR K L RV+KVT SKLSKI +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 131 QKMKVNLRNHYKNKKYKPLDLRAKKTRAMRQG 36
Q+ K R YK PL+LR K TRA R+G
Sbjct: 82 QRKKEEARKKYKKLSKTPLNLRPKLTRAKRKG 113
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 59.3 bits (137), Expect = 2e-08
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = -3
Query: 230 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 51
+LRV + TG +KLS+I VVRK IAR+ + Q+ +LR + K+ PLDLR K TR
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTR 92
Query: 50 AMRQ 39
A R+
Sbjct: 93 AKRR 96
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 56.4 bits (130), Expect = 2e-07
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = -3
Query: 227 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRA 48
LR KV+ G A KL +I +VRK IA+ V +++ + +++N K+ P+DLR KKTRA
Sbjct: 33 LRTVKVSAGNAQKLGRIGLVRKRIAKFLTVINEQRRNSVKNAAKSSTKLPVDLRGKKTRA 92
Query: 47 MRQ 39
+RQ
Sbjct: 93 IRQ 95
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 51.6 bits (118), Expect = 4e-06
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = -3
Query: 308 VKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 129
+K +LR K L+ LRV + TGG ++L +IR +RK+IAR+ V +Q
Sbjct: 5 MKIKDLREKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQ 64
Query: 128 KMKVNLRNHYKNKKYK---PLDLRAKKTRAMR 42
+ NL+ Y ++K + P LR K T R
Sbjct: 65 NERSNLKMFYADRKLRCKTPKVLRTKLTHRRR 96
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 46.4 bits (105), Expect = 2e-04
Identities = 36/97 (37%), Positives = 47/97 (48%)
Frame = -3
Query: 329 VTVKMGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIAR 150
VTV M ++K LR ++ L+ LRVA+VTGG +KLS I+ VR A+
Sbjct: 104 VTVAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALRE 162
Query: 149 VYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRQ 39
Y K K PLDLR KKT A+R+
Sbjct: 163 AY-------------KKKKKSLLPLDLRPKKTCAIRR 186
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 41.5 bits (93), Expect = 0.005
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = -3
Query: 230 NLRVAKVTGG-VASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 54
+LR K T G V ++++ RV +K +ARV V +QK + R ++ ++ P R + T
Sbjct: 58 SLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAAFEGAEHIPKTFRPRLT 117
Query: 53 RAMR 42
AMR
Sbjct: 118 HAMR 121
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 39.5 bits (88), Expect = 0.019
Identities = 26/61 (42%), Positives = 28/61 (45%)
Frame = +1
Query: 43 RIARVFLALKSKGXXXXXXXXXXXXXXXXW*YTM*TRAIAFLTTRILDSLEATPPVTLAT 222
R+ARVF KS G W T+ AIA T IL SL PPVTLAT
Sbjct: 425 RMARVFFLRKSSGWYFAPSYADRKDANCLWRITVRVCAIANRTCLILLSLPGAPPVTLAT 484
Query: 223 R 225
R
Sbjct: 485 R 485
>UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L29,
putative - Trichomonas vaginalis G3
Length = 124
Score = 39.5 bits (88), Expect = 0.019
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = -3
Query: 317 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 138
MG +K EL K L L+ K A+KL++I+ R+ +ARV +
Sbjct: 1 MGHLKGKELIKKTRQELLDELAGLEKKLFELKGQKAASAAATKLTEIKNTRRDVARVKSI 60
Query: 137 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMR 42
+ L+ Y K P+DLR + +++R
Sbjct: 61 LMVSQRKALQEKYAKAKLVPIDLRKHQEKSLR 92
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 37.9 bits (84), Expect = 0.057
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -3
Query: 122 KVNLRNHYKNKKYKPLDLRAKKTRAMRQ 39
K NL YK KKYK L LR KKTRA+R+
Sbjct: 43 KENLGKFYKGKKYKHLHLRPKKTRAVRR 70
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 37.1 bits (82), Expect = 0.099
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = -3
Query: 227 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 54
L + K+T V+SK SKI V K I+R+ V +Q K NLR KYKPL + T
Sbjct: 17 LGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLR------KYKPLQSKKAHT 68
>UniRef50_Q8Y3Q8 Cluster: Lmo2775 protein; n=5; Listeria|Rep:
Lmo2775 protein - Listeria monocytogenes
Length = 722
Score = 31.1 bits (67), Expect = 6.5
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 108 SKIDLHLLVIHNVNTCDSFSYNTDLGQFRSNSTSNFSNP 224
SK DL + +I+ N D FSY+++ G FR T N ++P
Sbjct: 507 SKEDLRVNIIYAENNQDYFSYDSNTGDFR---TGNITDP 542
>UniRef50_UPI0000F2ADF6 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 744
Score = 30.7 bits (66), Expect = 8.6
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2
Query: 135 SPEDEGQS*KPLQKQEIQAFRFKSQEDP 52
SP+D+ QS KPL+ QEIQ +F + P
Sbjct: 480 SPKDDYQSSKPLESQEIQPQQFLKSKAP 507
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 274,792,033
Number of Sequences: 1657284
Number of extensions: 3804334
Number of successful extensions: 9192
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9187
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13220924981
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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