BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_D16
(367 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 23 1.3
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 22 2.3
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 21 3.9
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 21 5.2
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 21 5.2
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 5.2
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 21 5.2
U61152-1|AAB41307.1| 45|Tribolium castaneum TATH2 protein. 20 6.9
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 22.6 bits (46), Expect = 1.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 131 QKMKVNLRNHYKNKKYKPL 75
+K ++ N Y N KYKPL
Sbjct: 24 KKTVFDIPNDYLNDKYKPL 42
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.8 bits (44), Expect = 2.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 230 LLILSLAPQAV*IAPFYLLSLILNTSLCPF 319
LLIL + + P+YLL + N PF
Sbjct: 272 LLILFSCLLHLVVTPYYLLIEVCNAGYLPF 301
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 21.0 bits (42), Expect = 3.9
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 266 IAPFYLLSLILNTSLCPF 319
+ PFY+++ + TS C F
Sbjct: 234 LIPFYVVATLGTTSSCTF 251
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 20.6 bits (41), Expect = 5.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 135 SPEDEGQS*KPLQKQEI 85
SP +G KP+ K+EI
Sbjct: 464 SPNVDGPDWKPISKEEI 480
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 20.6 bits (41), Expect = 5.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 135 SPEDEGQS*KPLQKQEI 85
SP +G KP+ K+EI
Sbjct: 464 SPNVDGPDWKPISKEEI 480
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 20.6 bits (41), Expect = 5.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 135 SPEDEGQS*KPLQKQEI 85
SP +G KP+ K+EI
Sbjct: 466 SPNVDGPDWKPISKEEI 482
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 20.6 bits (41), Expect = 5.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 197 ASKLSKIRVVRKAIARVYIVYH 132
+ KLSKI+ ++ A + +YH
Sbjct: 128 SDKLSKIQTLKLAARYIDFLYH 149
>U61152-1|AAB41307.1| 45|Tribolium castaneum TATH2 protein.
Length = 45
Score = 20.2 bits (40), Expect = 6.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 336 RERDRQNGQSEVF 298
RER R NG +E F
Sbjct: 5 RERRRMNGLNEAF 17
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,628
Number of Sequences: 336
Number of extensions: 1028
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7510735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -