Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_D16
         (367 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,...   120   6e-28
AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,...   120   6e-28
AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p pro...   119   1e-27
BT025204-1|ABF17895.1|  784|Drosophila melanogaster FI01112p pro...    27   7.5  
BT022122-1|AAY51517.1|  784|Drosophila melanogaster IP09065p pro...    27   7.5  
AJ250955-1|CAB63944.1|  718|Drosophila melanogaster Sox50E prote...    27   7.5  
AE013599-1843|AAF58279.2|  784|Drosophila melanogaster CG8404-PA...    27   7.5  
AY075535-1|AAL68342.1|  404|Drosophila melanogaster RH07911p pro...    27   10.0 
AE014135-209|ABC65833.1|  404|Drosophila melanogaster CG17471-PB...    27   10.0 
AE014135-208|ABC65832.1|  404|Drosophila melanogaster CG17471-PA...    27   10.0 

>AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,
           isoform A protein.
          Length = 123

 Score =  120 bits (289), Expect = 6e-28
 Identities = 64/93 (68%), Positives = 68/93 (73%)
 Frame = -3

Query: 317 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 138
           M KVKCSELR KD              L +LRVAKVTGG  SKLSKIRVVRKAIARVYIV
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIV 60

Query: 137 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRQ 39
            HQK K NLR  +KNKKYKPLDLR KKTRA+R+
Sbjct: 61  MHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRK 93


>AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,
           isoform B protein.
          Length = 123

 Score =  120 bits (289), Expect = 6e-28
 Identities = 64/93 (68%), Positives = 68/93 (73%)
 Frame = -3

Query: 317 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 138
           M KVKCSELR KD              L +LRVAKVTGG  SKLSKIRVVRKAIARVYIV
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIV 60

Query: 137 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRQ 39
            HQK K NLR  +KNKKYKPLDLR KKTRA+R+
Sbjct: 61  MHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRK 93


>AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p
           protein.
          Length = 123

 Score =  119 bits (287), Expect = 1e-27
 Identities = 64/93 (68%), Positives = 68/93 (73%)
 Frame = -3

Query: 317 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 138
           M KVKCSELR KD              L +LRVAKVTGG  SKLSKIRVVRKAIARVYIV
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGSPSKLSKIRVVRKAIARVYIV 60

Query: 137 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRQ 39
            HQK K NLR  +KNKKYKPLDLR KKTRA+R+
Sbjct: 61  MHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRK 93


>BT025204-1|ABF17895.1|  784|Drosophila melanogaster FI01112p
           protein.
          Length = 784

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -3

Query: 152 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRQG 36
           R Y+   ++++V     + N KY+P   +  K RAM+ G
Sbjct: 262 RPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPG 300


>BT022122-1|AAY51517.1|  784|Drosophila melanogaster IP09065p
           protein.
          Length = 784

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -3

Query: 152 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRQG 36
           R Y+   ++++V     + N KY+P   +  K RAM+ G
Sbjct: 262 RPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPG 300


>AJ250955-1|CAB63944.1|  718|Drosophila melanogaster Sox50E protein
           protein.
          Length = 718

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -3

Query: 152 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRQG 36
           R Y+   ++++V     + N KY+P   +  K RAM+ G
Sbjct: 262 RPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPG 300


>AE013599-1843|AAF58279.2|  784|Drosophila melanogaster CG8404-PA
           protein.
          Length = 784

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -3

Query: 152 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRQG 36
           R Y+   ++++V     + N KY+P   +  K RAM+ G
Sbjct: 262 RPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPG 300


>AY075535-1|AAL68342.1|  404|Drosophila melanogaster RH07911p
           protein.
          Length = 404

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 164 KAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 51
           +A +++ +  H   K N+ +H+K K+Y PL  R  + R
Sbjct: 65  RAYSKIKVDNHLFNKENMPSHFKVKEYCPLVFRNLRER 102


>AE014135-209|ABC65833.1|  404|Drosophila melanogaster CG17471-PB,
           isoform B protein.
          Length = 404

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 164 KAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 51
           +A +++ +  H   K N+ +H+K K+Y PL  R  + R
Sbjct: 65  RAYSKIKVDNHLFNKENMPSHFKVKEYCPLVFRNLRER 102


>AE014135-208|ABC65832.1|  404|Drosophila melanogaster CG17471-PA,
           isoform A protein.
          Length = 404

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 164 KAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 51
           +A +++ +  H   K N+ +H+K K+Y PL  R  + R
Sbjct: 65  RAYSKIKVDNHLFNKENMPSHFKVKEYCPLVFRNLRER 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,476,592
Number of Sequences: 53049
Number of extensions: 182032
Number of successful extensions: 585
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)