Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_D15
         (484 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063634-1|AAH63634.1|  686|Homo sapiens MAM domain containing 2...    29   6.5  
BC016383-1|AAH16383.1|  686|Homo sapiens MAM domain containing 2...    29   6.5  
AL392044-1|CAH71143.1|  686|Homo sapiens MAM domain containing 2...    29   6.5  
AL158153-1|CAH73080.1|  686|Homo sapiens MAM domain containing 2...    29   6.5  
AK123631-1|BAC85667.1|  207|Homo sapiens protein ( Homo sapiens ...    29   6.5  
AK130394-1|BAC85341.1|  151|Homo sapiens protein ( Homo sapiens ...    29   8.6  

>BC063634-1|AAH63634.1|  686|Homo sapiens MAM domain containing 2
           protein.
          Length = 686

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -2

Query: 468 MNTNYCFNXTFKYNLLCDFNVSRNNPN 388
           M T YC    F+ N LC F V+R NPN
Sbjct: 162 MTTGYCIECDFEENHLCGF-VNRWNPN 187


>BC016383-1|AAH16383.1|  686|Homo sapiens MAM domain containing 2
           protein.
          Length = 686

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -2

Query: 468 MNTNYCFNXTFKYNLLCDFNVSRNNPN 388
           M T YC    F+ N LC F V+R NPN
Sbjct: 162 MTTGYCIECDFEENHLCGF-VNRWNPN 187


>AL392044-1|CAH71143.1|  686|Homo sapiens MAM domain containing 2
           protein.
          Length = 686

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -2

Query: 468 MNTNYCFNXTFKYNLLCDFNVSRNNPN 388
           M T YC    F+ N LC F V+R NPN
Sbjct: 162 MTTGYCIECDFEENHLCGF-VNRWNPN 187


>AL158153-1|CAH73080.1|  686|Homo sapiens MAM domain containing 2
           protein.
          Length = 686

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -2

Query: 468 MNTNYCFNXTFKYNLLCDFNVSRNNPN 388
           M T YC    F+ N LC F V+R NPN
Sbjct: 162 MTTGYCIECDFEENHLCGF-VNRWNPN 187


>AK123631-1|BAC85667.1|  207|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41637 fis, clone FEBRA1000030, weakly  similar
           to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
          Length = 207

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -1

Query: 139 YNPAQAICKFLHN*NVLYPLSIRHIINIYLLWQTYIHE*LHNI 11
           Y  A A+C  LH     + LS+  +I++Y+   T+ H   H +
Sbjct: 46  YTHAHAVCTSLHTHTHTHTLSLYWLISLYIHTHTHTHTHTHAV 88


>AK130394-1|BAC85341.1|  151|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26884 fis, clone PRS09279. ).
          Length = 151

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -2

Query: 159 IYLLVYNTIPHKPFASFYTTKTYCIHYLYVISLIYTCFGKHIFTNNXTIY 10
           I L + +++  K F   YT    C+   Y+ + IY C   HI T+  T Y
Sbjct: 4   IKLKIKSSLHIKAFFYIYTYMCVCV---YMYTHIYVCMCVHIHTHTHTFY 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,765,855
Number of Sequences: 237096
Number of extensions: 1051380
Number of successful extensions: 1390
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)