Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_D12
         (494 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6C6F Cluster: PREDICTED: hypothetical protein;...    38   0.12 
UniRef50_Q1HR71 Cluster: Uncharacterized polypeptide; n=2; Culic...    38   0.12 
UniRef50_Q9U341 Cluster: Putative uncharacterized protein; n=1; ...    33   4.6  

>UniRef50_UPI0000DB6C6F Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 151

 Score = 37.9 bits (84), Expect = 0.12
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = -1

Query: 494 EXMMTRSALLLATIGLGLSTFSVRQMILNQSRR 396
           E  MT+SA +LAT+GL +S FSVR+M+ ++  R
Sbjct: 117 ERNMTKSAYILATVGLSMSIFSVRKMLTSKHGR 149


>UniRef50_Q1HR71 Cluster: Uncharacterized polypeptide; n=2;
           Culicidae|Rep: Uncharacterized polypeptide - Aedes
           aegypti (Yellowfever mosquito)
          Length = 63

 Score = 37.9 bits (84), Expect = 0.12
 Identities = 16/28 (57%), Positives = 23/28 (82%)
 Frame = -1

Query: 479 RSALLLATIGLGLSTFSVRQMILNQSRR 396
           RSA LLA +G+GLS+FS++QM+  Q +R
Sbjct: 34  RSAALLAALGIGLSSFSMKQMLTKQPKR 61


>UniRef50_Q9U341 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 101

 Score = 32.7 bits (71), Expect = 4.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 273 CPTWMHSGVFFFQKTCCXCXVSCLRQACSG 362
           C + MH  + FF + CC C   C++  C G
Sbjct: 72  CCSCMHGVLRFFAELCCNCCAGCVQGICQG 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,457,462
Number of Sequences: 1657284
Number of extensions: 5591005
Number of successful extensions: 10029
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10028
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)