Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_D07
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   4.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   8.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.3  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 238 VEYSMMHR*SVFVANFYNLCRGTVISNFD 152
           +E  +M   ++ V  F  L RGT+I +FD
Sbjct: 93  IECFVMMALTLIVTLFTFLARGTLIKSFD 121


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 238 VEYSMMHR*SVFVANFYNLCRGTVISNFD 152
           +E  +M   ++ V  F  L RGT+I +FD
Sbjct: 93  IECFVMMALTLIVTLFTFLARGTLIKSFD 121


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 115 ICESKRKENYYCSQNLI 165
           +CE +RK +  C  NL+
Sbjct: 936 MCEGERKHHMPCPSNLV 952


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 464 GFIAESGPDERVHLCHVSTQPKQPTCRCC 550
           G I E    +RVH   V++   +P  R C
Sbjct: 223 GRIVERFTSDRVHAALVTSPRARPLARTC 251


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 106 GCPICESKRKENYY 147
           GC  CE K+KE+ +
Sbjct: 69  GCVKCEQKQKEDVH 82


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +2

Query: 569 NNPSVWSFRC 598
           NNP  W F C
Sbjct: 662 NNPGFWLFHC 671


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 224 HRIFNFIYLRTIEVN*NTAYITICY 298
           +RIF FI +    +  NT     CY
Sbjct: 531 NRIFGFIIIIGCLIQFNTIVFAFCY 555


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,900
Number of Sequences: 336
Number of extensions: 3093
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)