Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_D07
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071161-1|AAL48783.1|   89|Drosophila melanogaster RE19842p pro...   103   2e-22
AE014296-3571|AAF51743.2|   89|Drosophila melanogaster CG7625-PA...   102   4e-22
AE014296-811|AAF47874.1|   85|Drosophila melanogaster CG1268-PA ...    95   9e-20
AY069473-1|AAL39618.1|   84|Drosophila melanogaster LD21410p pro...    77   1e-14
AE014296-786|AAF47856.1|   84|Drosophila melanogaster CG11589-PA...    77   1e-14
AE014297-2275|AAF55365.1|   88|Drosophila melanogaster CG14909-P...    49   4e-06
U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein.         28   8.9  
AY075216-1|AAL68083.1|  448|Drosophila melanogaster AT16002p pro...    28   8.9  

>AY071161-1|AAL48783.1|   89|Drosophila melanogaster RE19842p
           protein.
          Length = 89

 Score =  103 bits (247), Expect = 2e-22
 Identities = 44/69 (63%), Positives = 54/69 (78%)
 Frame = -2

Query: 619 GIICPIFAPKGPXRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTW 440
           GIICP FA +GP RG+ Q  LILTAATCWLFWLC YM Q+NPLIGP+LS   ++ ++R W
Sbjct: 19  GIICPFFA-RGPNRGVTQCCLILTAATCWLFWLCCYMTQLNPLIGPKLSMNEIMIMAREW 77

Query: 439 GNKINNTQA 413
           GN+I +T A
Sbjct: 78  GNEIKDTMA 86


>AE014296-3571|AAF51743.2|   89|Drosophila melanogaster CG7625-PA
           protein.
          Length = 89

 Score =  102 bits (244), Expect = 4e-22
 Identities = 43/69 (62%), Positives = 54/69 (78%)
 Frame = -2

Query: 619 GIICPIFAPKGPXRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTW 440
           GIICP FA +GP RG+ Q  L+LTAATCWLFWLC YM Q+NPLIGP+LS   ++ ++R W
Sbjct: 19  GIICPFFA-RGPNRGVTQCCLMLTAATCWLFWLCCYMTQLNPLIGPKLSMNEIMIMAREW 77

Query: 439 GNKINNTQA 413
           GN+I +T A
Sbjct: 78  GNEIKDTMA 86


>AE014296-811|AAF47874.1|   85|Drosophila melanogaster CG1268-PA
           protein.
          Length = 85

 Score = 94.7 bits (225), Expect = 9e-20
 Identities = 38/64 (59%), Positives = 47/64 (73%)
 Frame = -2

Query: 619 GIICPIFAPKGPXRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTW 440
           GI  PI  PKGP + +I+ +L+LTAA CWLFWLC YMAQMNPLIGP+L  + +  I R+W
Sbjct: 19  GIAMPIMTPKGPHQNLIRCILMLTAACCWLFWLCCYMAQMNPLIGPKLKRDVVAMIGRSW 78

Query: 439 GNKI 428
            N I
Sbjct: 79  NNPI 82


>AY069473-1|AAL39618.1|   84|Drosophila melanogaster LD21410p
           protein.
          Length = 84

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 29/60 (48%), Positives = 42/60 (70%)
 Frame = -2

Query: 607 PIFAPKGPXRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTWGNKI 428
           PI   K P   +++ + +LTA  CWLFWLC Y+AQ+NPL+GP+L+  T+  I+ +WGN I
Sbjct: 22  PILFTKQPHDDLVRCIFLLTAVVCWLFWLCCYLAQLNPLLGPKLNGNTIRIIASSWGNPI 81


>AE014296-786|AAF47856.1|   84|Drosophila melanogaster CG11589-PA
           protein.
          Length = 84

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 29/60 (48%), Positives = 42/60 (70%)
 Frame = -2

Query: 607 PIFAPKGPXRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTWGNKI 428
           PI   K P   +++ + +LTA  CWLFWLC Y+AQ+NPL+GP+L+  T+  I+ +WGN I
Sbjct: 22  PILFTKQPHDDLVRCIFLLTAVVCWLFWLCCYLAQLNPLLGPKLNGNTIRIIASSWGNPI 81


>AE014297-2275|AAF55365.1|   88|Drosophila melanogaster CG14909-PA
           protein.
          Length = 88

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 19/51 (37%), Positives = 31/51 (60%)
 Frame = -2

Query: 580 RGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTWGNKI 428
           RG+I+  +ILTA  C+L W+  ++ Q+NPL GPR   + ++ +   W   I
Sbjct: 31  RGLIRCCVILTAVCCYLAWMVTFVMQLNPLTGPRAKQKIILGMITYWPRSI 81


>U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein.
          Length = 1231

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -2

Query: 289 CNICRILV--YLYSSKINKVEYSMMHR*SVFVANFYNLCRGTVISNFDCSNN 140
           C+I R+L    + S  + K+ Y+ MH   + +  F +    TV+  FD  +N
Sbjct: 8   CHIMRLLATQVVASDFVQKIAYNKMHIKQIIIQGFKSYKDQTVVEPFDKRHN 59


>AY075216-1|AAL68083.1|  448|Drosophila melanogaster AT16002p
           protein.
          Length = 448

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -1

Query: 590 RTXQRDYSSGVNINSS--DMLVVLAVCLHGTDEPSHRAQTQQ*NPNL 456
           R  QR+  S +   ++   M VVL +CL  T  P  R QT Q N NL
Sbjct: 80  RNLQRELYSPIQCMNALKVMAVVLTICLVFTTIPLLRRQTMQENDNL 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,175,378
Number of Sequences: 53049
Number of extensions: 515716
Number of successful extensions: 822
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)